.gitignore

# Compiled source #
###################
*.com
*.class
*.dll
*.exe
*.o
*.so

# Packages #
############
# it's better to unpack these files and commit the raw source
# git has its own built in compression methods *.7z *.dmg
*.gz
*.iso
*.jar
*.rar
*.tar
*.zip

# Logs and databases #
######################
*.log
*.sql
*.sqlite

# OS generated files #
######################
.DS_Store
.DS_Store?
._*
.Spotlight-V100
.Trashes
ehthumbs.db
Thumbs.db

# autotools #
/aclocal.m4
/src/config.h.in~
/Makefile.in
/config.status
/stamp-h1
/missing
/install-sh
/compile
/depcomp
.deps
autom4te.cache
/configure
/config.h
/src/config.h.in
/config.mk

#my
/main
/slow5tools
/slow5tools_static
/*.fast5
*.fig
/*.fa
/*.fasta
.png
/*.tsv
*.swp
/tmp/
/hdf5
/.vscode
src/config.h
/profile.nvprof
/*.slow5
/*.txt
/*.blow5
python/pyslow5.c
build/
dist/
pyslow5.egg-info/
docs/doxygen
examples/xample.slow5.idx
/.eggs
a.out
/test.c
MANIFEST
/*.csv
/*.tsv
/*.blow5.idx
thirdparty/streamvbyte16

# testing output
*actual*
*.h5dump

# R output
*Rplots.pdf
*.Rhistory