Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Register new data products as they're created by other processes #5

Open
mruffalo opened this issue Apr 2, 2024 · 0 comments
Open

Register new data products as they're created by other processes #5

mruffalo opened this issue Apr 2, 2024 · 0 comments
Assignees
@pennycuda

Comments

@mruffalo
Copy link
Contributor

mruffalo commented Apr 2, 2024

Some CWL pipeline will run on HIVE infrastructure, creating (at least) several .h5ad files: one for the overall data product for that modality, and one for each tissue.

Once those files are created and uploaded to S3, they need to be registered in this application, creating a new DataProduct object linked to appropriate HuBMAP datasets also tracked in this database by their primary key.

Create automation scripts/functionality to perform this operation.
@pennycuda pennycuda self-assigned this Oct 18, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@pennycuda pennycuda

Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@mruffalo @pennycuda