diff --git a/staging/hubmap-pancreas-millitome-spraggins-2024/millitome-generic-pancreas-male.html b/staging/hubmap-pancreas-millitome-spraggins-2024/millitome-generic-pancreas-male.html
new file mode 100644
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+++ b/staging/hubmap-pancreas-millitome-spraggins-2024/millitome-generic-pancreas-male.html
@@ -0,0 +1,26 @@
+
+
+
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+ HRA Millitome: Generic Pancreas, Male
+
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+
diff --git a/staging/hubmap-pancreas-millitome-spraggins-2024/registrations.yaml b/staging/hubmap-pancreas-millitome-spraggins-2024/registrations.yaml
index e68a7703..348443ba 100644
--- a/staging/hubmap-pancreas-millitome-spraggins-2024/registrations.yaml
+++ b/staging/hubmap-pancreas-millitome-spraggins-2024/registrations.yaml
@@ -15,484 +15,484 @@
label: PE-1A
link: https://portal.hubmapconsortium.org/browse/HBM625.ZFTZ.894
id: https://portal.hubmapconsortium.org/browse/HBM625.ZFTZ.894
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A1
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A1
- sample_type: Tissue Block
label: PE-1B
link: https://portal.hubmapconsortium.org/browse/HBM859.DZPK.256
id: https://portal.hubmapconsortium.org/browse/HBM859.DZPK.256
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B1
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B1
- sample_type: Tissue Block
label: PE-1C
link: https://portal.hubmapconsortium.org/browse/HBM527.VMNR.723
id: https://portal.hubmapconsortium.org/browse/HBM527.VMNR.723
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C1
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C1
- sample_type: Tissue Block
label: PE-1D
link: https://portal.hubmapconsortium.org/browse/HBM685.VJVH.785
id: https://portal.hubmapconsortium.org/browse/HBM685.VJVH.785
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D1
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D1
- sample_type: Tissue Block
label: CLR-2A
link: https://portal.hubmapconsortium.org/browse/HBM833.JPZG.893
id: https://portal.hubmapconsortium.org/browse/HBM833.JPZG.893
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A2
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A2
- sample_type: Tissue Block
label: CLR-2B
link: https://portal.hubmapconsortium.org/browse/HBM329.BFHH.463
id: https://portal.hubmapconsortium.org/browse/HBM329.BFHH.463
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B2
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B2
- sample_type: Tissue Block
label: CLR-2C
link: https://portal.hubmapconsortium.org/browse/HBM958.LBJH.999
id: https://portal.hubmapconsortium.org/browse/HBM958.LBJH.999
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C2
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C2
- sample_type: Tissue Block
label: CLR-2D
link: https://portal.hubmapconsortium.org/browse/HBM377.WDKH.475
id: https://portal.hubmapconsortium.org/browse/HBM377.WDKH.475
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D2
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D2
- sample_type: Tissue Block
label: PCMC-3A
link: https://portal.hubmapconsortium.org/browse/HBM869.FJXG.495
id: https://portal.hubmapconsortium.org/browse/HBM869.FJXG.495
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A3
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A3
- sample_type: Tissue Block
label: PCMC-3B
link: https://portal.hubmapconsortium.org/browse/HBM927.QBZP.837
id: https://portal.hubmapconsortium.org/browse/HBM927.QBZP.837
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B3
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B3
- sample_type: Tissue Block
label: PCMC-3C
link: https://portal.hubmapconsortium.org/browse/HBM293.ZZWZ.357
id: https://portal.hubmapconsortium.org/browse/HBM293.ZZWZ.357
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C3
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C3
- sample_type: Tissue Block
label: PCMC-3D
link: https://portal.hubmapconsortium.org/browse/HBM442.TVMK.429
id: https://portal.hubmapconsortium.org/browse/HBM442.TVMK.429
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D3
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D3
- sample_type: Tissue Block
label: FCMC-4A
link: https://portal.hubmapconsortium.org/browse/HBM484.CKHP.546
id: https://portal.hubmapconsortium.org/browse/HBM484.CKHP.546
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A4
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A4
- sample_type: Tissue Block
label: FCMC-4B
link: https://portal.hubmapconsortium.org/browse/HBM385.FTLT.493
id: https://portal.hubmapconsortium.org/browse/HBM385.FTLT.493
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B4
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B4
- sample_type: Tissue Block
label: FCMC-4C
link: https://portal.hubmapconsortium.org/browse/HBM279.ZBFG.324
id: https://portal.hubmapconsortium.org/browse/HBM279.ZBFG.324
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C4
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C4
- sample_type: Tissue Block
label: FCMC-4D
link: https://portal.hubmapconsortium.org/browse/HBM674.MWZD.688
id: https://portal.hubmapconsortium.org/browse/HBM674.MWZD.688
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D4
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D4
- sample_type: Tissue Block
label: FF-5A
link: https://portal.hubmapconsortium.org/browse/HBM883.PSDQ.427
id: https://portal.hubmapconsortium.org/browse/HBM883.PSDQ.427
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A5
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A5
- sample_type: Tissue Block
label: FF-5B
link: https://portal.hubmapconsortium.org/browse/HBM527.NKKJ.929
id: https://portal.hubmapconsortium.org/browse/HBM527.NKKJ.929
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B5
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B5
- sample_type: Tissue Block
label: FF-5C
link: https://portal.hubmapconsortium.org/browse/HBM973.ZLKQ.336
id: https://portal.hubmapconsortium.org/browse/HBM973.ZLKQ.336
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C5
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C5
- sample_type: Tissue Block
label: FF-5D
link: https://portal.hubmapconsortium.org/browse/HBM876.MXVS.964
id: https://portal.hubmapconsortium.org/browse/HBM876.MXVS.964
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D5
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D5
- sample_type: Tissue Block
label: RNA-6A
link: https://portal.hubmapconsortium.org/browse/HBM246.CHBX.834
id: https://portal.hubmapconsortium.org/browse/HBM246.CHBX.834
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A6
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A6
- sample_type: Tissue Block
label: RNA-6B
link: https://portal.hubmapconsortium.org/browse/HBM766.MZBD.225
id: https://portal.hubmapconsortium.org/browse/HBM766.MZBD.225
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B6
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B6
- sample_type: Tissue Block
label: RNA-6C
link: https://portal.hubmapconsortium.org/browse/HBM757.TRPD.633
id: https://portal.hubmapconsortium.org/browse/HBM757.TRPD.633
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C6
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C6
- sample_type: Tissue Block
label: RNA-6D
link: https://portal.hubmapconsortium.org/browse/HBM557.HCGR.966
id: https://portal.hubmapconsortium.org/browse/HBM557.HCGR.966
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D6
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D6
- sample_type: Tissue Block
label: PE-7A
link: https://portal.hubmapconsortium.org/browse/HBM649.JXXJ.663
id: https://portal.hubmapconsortium.org/browse/HBM649.JXXJ.663
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A7
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A7
- sample_type: Tissue Block
label: PE-7B
link: https://portal.hubmapconsortium.org/browse/HBM585.QZJW.757
id: https://portal.hubmapconsortium.org/browse/HBM585.QZJW.757
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B7
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B7
- sample_type: Tissue Block
label: PE-7C
link: https://portal.hubmapconsortium.org/browse/HBM976.ZRGZ.727
id: https://portal.hubmapconsortium.org/browse/HBM976.ZRGZ.727
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C7
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C7
- sample_type: Tissue Block
label: PE-7D
link: https://portal.hubmapconsortium.org/browse/HBM546.DGDM.997
id: https://portal.hubmapconsortium.org/browse/HBM546.DGDM.997
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D7
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D7
- sample_type: Tissue Block
label: CLR-8A
link: https://portal.hubmapconsortium.org/browse/HBM553.NXDC.839
id: https://portal.hubmapconsortium.org/browse/HBM553.NXDC.839
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A8
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A8
- sample_type: Tissue Block
label: CLR-8B
link: https://portal.hubmapconsortium.org/browse/HBM729.SWHH.556
id: https://portal.hubmapconsortium.org/browse/HBM729.SWHH.556
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B8
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B8
- sample_type: Tissue Block
label: CLR-8C
link: https://portal.hubmapconsortium.org/browse/HBM982.QJXL.457
id: https://portal.hubmapconsortium.org/browse/HBM982.QJXL.457
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C8
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C8
- sample_type: Tissue Block
label: CLR-8D
link: https://portal.hubmapconsortium.org/browse/HBM358.RPHN.988
id: https://portal.hubmapconsortium.org/browse/HBM358.RPHN.988
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D8
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D8
- sample_type: Tissue Block
label: PCMC-9A
link: https://portal.hubmapconsortium.org/browse/HBM682.GXDW.332
id: https://portal.hubmapconsortium.org/browse/HBM682.GXDW.332
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A9
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A9
- sample_type: Tissue Block
label: PCMC-9B
link: https://portal.hubmapconsortium.org/browse/HBM625.GBWK.235
id: https://portal.hubmapconsortium.org/browse/HBM625.GBWK.235
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B9
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B9
- sample_type: Tissue Block
label: PCMC-9C
link: https://portal.hubmapconsortium.org/browse/HBM946.VMFS.285
id: https://portal.hubmapconsortium.org/browse/HBM946.VMFS.285
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C9
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C9
- sample_type: Tissue Block
label: PCMC-9D
link: https://portal.hubmapconsortium.org/browse/HBM684.XGCJ.236
id: https://portal.hubmapconsortium.org/browse/HBM684.XGCJ.236
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D9
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D9
- sample_type: Tissue Block
label: FCMC-10A
link: https://portal.hubmapconsortium.org/browse/HBM226.VMCQ.457
id: https://portal.hubmapconsortium.org/browse/HBM226.VMCQ.457
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A10
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A10
- sample_type: Tissue Block
label: FCMC-10B
link: https://portal.hubmapconsortium.org/browse/HBM468.BSFF.497
id: https://portal.hubmapconsortium.org/browse/HBM468.BSFF.497
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B10
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B10
- sample_type: Tissue Block
label: FCMC-10C
link: https://portal.hubmapconsortium.org/browse/HBM885.NMZD.498
id: https://portal.hubmapconsortium.org/browse/HBM885.NMZD.498
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C10
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C10
- sample_type: Tissue Block
label: FCMC-10D
link: https://portal.hubmapconsortium.org/browse/HBM934.DSKM.373
id: https://portal.hubmapconsortium.org/browse/HBM934.DSKM.373
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D10
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D10
- sample_type: Tissue Block
label: FF-11A
link: https://portal.hubmapconsortium.org/browse/HBM477.DNSQ.482
id: https://portal.hubmapconsortium.org/browse/HBM477.DNSQ.482
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A11
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A11
- sample_type: Tissue Block
label: FF-11B
link: https://portal.hubmapconsortium.org/browse/HBM777.XKJR.955
id: https://portal.hubmapconsortium.org/browse/HBM777.XKJR.955
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B11
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B11
- sample_type: Tissue Block
label: FF-11C
link: https://portal.hubmapconsortium.org/browse/HBM932.BDDF.488
id: https://portal.hubmapconsortium.org/browse/HBM932.BDDF.488
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C11
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C11
- sample_type: Tissue Block
label: FF-11D
link: https://portal.hubmapconsortium.org/browse/HBM654.BRMR.499
id: https://portal.hubmapconsortium.org/browse/HBM654.BRMR.499
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D11
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D11
- sample_type: Tissue Block
label: RNA-12A
link: https://portal.hubmapconsortium.org/browse/HBM334.CKDR.378
id: https://portal.hubmapconsortium.org/browse/HBM334.CKDR.378
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A12
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A12
- sample_type: Tissue Block
label: RNA-12B
link: https://portal.hubmapconsortium.org/browse/HBM282.HRBR.725
id: https://portal.hubmapconsortium.org/browse/HBM282.HRBR.725
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B12
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B12
- sample_type: Tissue Block
label: RNA-12C
link: https://portal.hubmapconsortium.org/browse/HBM636.FSWJ.233
id: https://portal.hubmapconsortium.org/browse/HBM636.FSWJ.233
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C12
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C12
- sample_type: Tissue Block
label: RNA-12D
link: https://portal.hubmapconsortium.org/browse/HBM942.QCTR.435
id: https://portal.hubmapconsortium.org/browse/HBM942.QCTR.435
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D12
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D12
- sample_type: Tissue Block
label: PE-13A
link: https://portal.hubmapconsortium.org/browse/HBM664.CBCV.737
id: https://portal.hubmapconsortium.org/browse/HBM664.CBCV.737
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A13
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A13
- sample_type: Tissue Block
label: PE-13B
link: https://portal.hubmapconsortium.org/browse/HBM425.ZVGH.827
id: https://portal.hubmapconsortium.org/browse/HBM425.ZVGH.827
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B13
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B13
- sample_type: Tissue Block
label: PE-13C
link: https://portal.hubmapconsortium.org/browse/HBM395.JSFQ.926
id: https://portal.hubmapconsortium.org/browse/HBM395.JSFQ.926
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C13
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C13
- sample_type: Tissue Block
label: PE-13D
link: https://portal.hubmapconsortium.org/browse/HBM687.SHQR.253
id: https://portal.hubmapconsortium.org/browse/HBM687.SHQR.253
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D13
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D13
- sample_type: Tissue Block
label: CLR-14A
link: https://portal.hubmapconsortium.org/browse/HBM324.MGBM.394
id: https://portal.hubmapconsortium.org/browse/HBM324.MGBM.394
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A14
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A14
- sample_type: Tissue Block
label: CLR-14B
link: https://portal.hubmapconsortium.org/browse/HBM788.QJCW.535
id: https://portal.hubmapconsortium.org/browse/HBM788.QJCW.535
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B14
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B14
- sample_type: Tissue Block
label: CLR-14C
link: https://portal.hubmapconsortium.org/browse/HBM767.VGMG.745
id: https://portal.hubmapconsortium.org/browse/HBM767.VGMG.745
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C14
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C14
- sample_type: Tissue Block
label: CLR-14D
link: https://portal.hubmapconsortium.org/browse/HBM352.VWZK.846
id: https://portal.hubmapconsortium.org/browse/HBM352.VWZK.846
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D14
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D14
- sample_type: Tissue Block
label: PCMC-15A
link: https://portal.hubmapconsortium.org/browse/HBM838.QTSC.464
id: https://portal.hubmapconsortium.org/browse/HBM838.QTSC.464
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A15
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A15
- sample_type: Tissue Block
label: PCMC-15B
link: https://portal.hubmapconsortium.org/browse/HBM295.KDDN.578
id: https://portal.hubmapconsortium.org/browse/HBM295.KDDN.578
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B15
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B15
- sample_type: Tissue Block
label: PCMC-15C
link: https://portal.hubmapconsortium.org/browse/HBM555.HCPS.767
id: https://portal.hubmapconsortium.org/browse/HBM555.HCPS.767
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C15
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C15
- sample_type: Tissue Block
label: PCMC-15D
link: https://portal.hubmapconsortium.org/browse/HBM736.VNGX.794
id: https://portal.hubmapconsortium.org/browse/HBM736.VNGX.794
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D15
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D15
- sample_type: Tissue Block
label: FCMC-16A
link: https://portal.hubmapconsortium.org/browse/HBM935.CMXN.233
id: https://portal.hubmapconsortium.org/browse/HBM935.CMXN.233
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A16
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A16
- sample_type: Tissue Block
label: FCMC-16B
link: https://portal.hubmapconsortium.org/browse/HBM796.WWBF.666
id: https://portal.hubmapconsortium.org/browse/HBM796.WWBF.666
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B16
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B16
- sample_type: Tissue Block
label: FCMC-16C
link: https://portal.hubmapconsortium.org/browse/HBM825.CZWX.579
id: https://portal.hubmapconsortium.org/browse/HBM825.CZWX.579
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C16
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C16
- sample_type: Tissue Block
label: FCMC-16D
link: https://portal.hubmapconsortium.org/browse/HBM755.CTKR.399
id: https://portal.hubmapconsortium.org/browse/HBM755.CTKR.399
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D16
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D16
- sample_type: Tissue Block
label: FF-17A
link: https://portal.hubmapconsortium.org/browse/HBM432.XXDB.622
id: https://portal.hubmapconsortium.org/browse/HBM432.XXDB.622
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A17
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A17
- sample_type: Tissue Block
label: FF-17B
link: https://portal.hubmapconsortium.org/browse/HBM755.HBKW.434
id: https://portal.hubmapconsortium.org/browse/HBM755.HBKW.434
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B17
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B17
- sample_type: Tissue Block
label: FF-17C
link: https://portal.hubmapconsortium.org/browse/HBM995.KHXV.747
id: https://portal.hubmapconsortium.org/browse/HBM995.KHXV.747
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C17
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C17
- sample_type: Tissue Block
label: FF-17D
link: https://portal.hubmapconsortium.org/browse/HBM933.SVHX.434
id: https://portal.hubmapconsortium.org/browse/HBM933.SVHX.434
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D17
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D17
- sample_type: Tissue Block
label: RNA-18A
link: https://portal.hubmapconsortium.org/browse/HBM384.KLJF.772
id: https://portal.hubmapconsortium.org/browse/HBM384.KLJF.772
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A18
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A18
- sample_type: Tissue Block
label: RNA-18B
link: https://portal.hubmapconsortium.org/browse/HBM253.KNDT.482
id: https://portal.hubmapconsortium.org/browse/HBM253.KNDT.482
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B18
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B18
- sample_type: Tissue Block
label: RNA-18C
link: https://portal.hubmapconsortium.org/browse/HBM999.MHNH.368
id: https://portal.hubmapconsortium.org/browse/HBM999.MHNH.368
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C18
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C18
- sample_type: Tissue Block
label: RNA-18D
link: https://portal.hubmapconsortium.org/browse/HBM263.GPWC.874
id: https://portal.hubmapconsortium.org/browse/HBM263.GPWC.874
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D18
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D18
- sample_type: Tissue Block
label: PE-19A
link: https://portal.hubmapconsortium.org/browse/HBM846.JGXK.835
id: https://portal.hubmapconsortium.org/browse/HBM846.JGXK.835
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A19
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A19
- sample_type: Tissue Block
label: PE-19B
link: https://portal.hubmapconsortium.org/browse/HBM764.MVCB.754
id: https://portal.hubmapconsortium.org/browse/HBM764.MVCB.754
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B19
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B19
- sample_type: Tissue Block
label: PE-19C
link: https://portal.hubmapconsortium.org/browse/HBM677.BDRD.667
id: https://portal.hubmapconsortium.org/browse/HBM677.BDRD.667
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C19
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C19
- sample_type: Tissue Block
label: PE-19D
link: https://portal.hubmapconsortium.org/browse/HBM386.SFSR.799
id: https://portal.hubmapconsortium.org/browse/HBM386.SFSR.799
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D19
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D19
- sample_type: Tissue Block
label: CLR-20A
link: https://portal.hubmapconsortium.org/browse/HBM439.JJRL.379
id: https://portal.hubmapconsortium.org/browse/HBM439.JJRL.379
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A20
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A20
- sample_type: Tissue Block
label: CLR-20B
link: https://portal.hubmapconsortium.org/browse/HBM932.PBSW.589
id: https://portal.hubmapconsortium.org/browse/HBM932.PBSW.589
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B20
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B20
- sample_type: Tissue Block
label: CLR-20C
link: https://portal.hubmapconsortium.org/browse/HBM798.NQQL.444
id: https://portal.hubmapconsortium.org/browse/HBM798.NQQL.444
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C20
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C20
- sample_type: Tissue Block
label: CLR-20D
link: https://portal.hubmapconsortium.org/browse/HBM934.XMWH.474
id: https://portal.hubmapconsortium.org/browse/HBM934.XMWH.474
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D20
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D20
- sample_type: Tissue Block
label: PCMC-21A
link: https://portal.hubmapconsortium.org/browse/HBM523.LJDP.788
id: https://portal.hubmapconsortium.org/browse/HBM523.LJDP.788
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A21
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A21
- sample_type: Tissue Block
label: PCMC-21B
link: https://portal.hubmapconsortium.org/browse/HBM298.ZGSD.633
id: https://portal.hubmapconsortium.org/browse/HBM298.ZGSD.633
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B21
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B21
- sample_type: Tissue Block
label: PCMC-21C
link: https://portal.hubmapconsortium.org/browse/HBM662.BVNR.532
id: https://portal.hubmapconsortium.org/browse/HBM662.BVNR.532
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C21
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C21
- sample_type: Tissue Block
label: PCMC-21D
link: https://portal.hubmapconsortium.org/browse/HBM529.MJXG.897
id: https://portal.hubmapconsortium.org/browse/HBM529.MJXG.897
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D21
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D21
- sample_type: Tissue Block
label: FCMC-22A
link: https://portal.hubmapconsortium.org/browse/HBM693.WRFR.798
id: https://portal.hubmapconsortium.org/browse/HBM693.WRFR.798
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A22
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A22
- sample_type: Tissue Block
label: FCMC-22B
link: https://portal.hubmapconsortium.org/browse/HBM652.JZJM.672
id: https://portal.hubmapconsortium.org/browse/HBM652.JZJM.672
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B22
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B22
- sample_type: Tissue Block
label: FCMC-22C
link: https://portal.hubmapconsortium.org/browse/HBM986.ZTSL.433
id: https://portal.hubmapconsortium.org/browse/HBM986.ZTSL.433
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C22
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C22
- sample_type: Tissue Block
label: FCMC-22D
link: https://portal.hubmapconsortium.org/browse/HBM834.CKNS.258
id: https://portal.hubmapconsortium.org/browse/HBM834.CKNS.258
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D22
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D22
- sample_type: Tissue Block
label: FF-23A
link: https://portal.hubmapconsortium.org/browse/HBM785.PJSJ.638
id: https://portal.hubmapconsortium.org/browse/HBM785.PJSJ.638
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A23
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A23
- sample_type: Tissue Block
label: FF-23B
link: https://portal.hubmapconsortium.org/browse/HBM967.LFWL.562
id: https://portal.hubmapconsortium.org/browse/HBM967.LFWL.562
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B23
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B23
- sample_type: Tissue Block
label: FF-23C
link: https://portal.hubmapconsortium.org/browse/HBM657.KJJZ.262
id: https://portal.hubmapconsortium.org/browse/HBM657.KJJZ.262
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C23
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C23
- sample_type: Tissue Block
label: FF-23D
link: https://portal.hubmapconsortium.org/browse/HBM586.FJPR.395
id: https://portal.hubmapconsortium.org/browse/HBM586.FJPR.395
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D23
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D23
- sample_type: Tissue Block
label: RNA-24A
link: https://portal.hubmapconsortium.org/browse/HBM234.CXDK.624
id: https://portal.hubmapconsortium.org/browse/HBM234.CXDK.624
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#A24
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#A24
- sample_type: Tissue Block
label: RNA-24B
link: https://portal.hubmapconsortium.org/browse/HBM556.LCHZ.242
id: https://portal.hubmapconsortium.org/browse/HBM556.LCHZ.242
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#B24
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#B24
- sample_type: Tissue Block
label: RNA-24C
link: https://portal.hubmapconsortium.org/browse/HBM779.QWGV.396
id: https://portal.hubmapconsortium.org/browse/HBM779.QWGV.396
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#C24
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#C24
- sample_type: Tissue Block
label: RNA-24D
link: https://portal.hubmapconsortium.org/browse/HBM733.MVMH.924
id: https://portal.hubmapconsortium.org/browse/HBM733.MVMH.924
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#D24
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#D24
- sample_type: Tissue Block
label: PE-25
link: https://portal.hubmapconsortium.org/browse/HBM324.XBHH.364
id: https://portal.hubmapconsortium.org/browse/HBM324.XBHH.364
- rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-female#25
+ rui_location: https://purl.humanatlas.io/millitome/generic-pancreas-male#25
diff --git a/staging/hubmap-pancreas-millitome-spraggins-2024/rui_locations.jsonld b/staging/hubmap-pancreas-millitome-spraggins-2024/rui_locations.jsonld
index e9d33362..5d9124e5 100644
--- a/staging/hubmap-pancreas-millitome-spraggins-2024/rui_locations.jsonld
+++ b/staging/hubmap-pancreas-millitome-spraggins-2024/rui_locations.jsonld
@@ -5,7 +5,7 @@
"@id": "https://hubmapconsortium.github.io/hra-registrations/hubmap-pancreas-millitome-spraggins-2024/rui_locations.jsonld#Donor1",
"@type": "Donor",
"label": "DON530",
- "description": "Entered 7/6/2024, Bhargav Snehal Desai, HuBMAP",
+ "description": "Entered 7/14/2024, Bhargav Snehal Desai, HuBMAP",
"link": "http://example.com/user/link",
"consortium_name": "HuBMAP",
"provider_name": "HuBMAP",
@@ -18,41 +18,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-1A",
- "description": "11.3606 x 18.34146 x 13.5662 millimeter, 13.5662 millimeter",
+ "description": "18.85099 x 14.28507 x 18.53051 millimeter, 18.53051 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM625.ZFTZ.894",
"section_count": 0,
- "section_size": 13.5662,
+ "section_size": 18.53051,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A1",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A1",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A1_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A1_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A1",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A1",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 15.1908,
+ "x_translation": 16.06989,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 13.072,
+ "y_translation": 6.736183,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 50.00928,
- "placement_date": "2024-08-07"
+ "z_translation": 61.50711,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 11.3606,
- "y_dimension": 18.34146,
- "z_dimension": 13.5662,
- "creation_date": "2024-08-07",
+ "x_dimension": 18.85099,
+ "y_dimension": 14.28507,
+ "z_dimension": 18.53051,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -65,41 +65,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-1B",
- "description": "14.18919 x 23.07206 x 15.58746 millimeter, 15.58746 millimeter",
+ "description": "10.95382 x 23.61784 x 17.89365 millimeter, 17.89365 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM859.DZPK.256",
"section_count": 0,
- "section_size": 15.58746,
+ "section_size": 17.89365,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B1",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B1",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B1_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B1_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B1",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B1",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 17.16146,
+ "x_translation": 5.76465,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 22.18026,
+ "y_translation": 14.0108,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 51.01991,
- "placement_date": "2024-08-07"
+ "z_translation": 61.60286,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.18919,
- "y_dimension": 23.07206,
- "z_dimension": 15.58746,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.95382,
+ "y_dimension": 23.61784,
+ "z_dimension": 17.89365,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -112,43 +112,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-1C",
- "description": "22.46675 x 18.77496 x 21.58455 millimeter, 21.58455 millimeter",
+ "description": "7.670442 x 23.32584 x 13.02857 millimeter, 13.02857 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM527.VMNR.723",
"section_count": 0,
- "section_size": 21.58455,
+ "section_size": 13.02857,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C1",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C1",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C1_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C1_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C1",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C1",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 11.6423,
+ "x_translation": 7.40634,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 27.9671,
+ "y_translation": 16.04655,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 54.01846,
- "placement_date": "2024-08-07"
+ "z_translation": 50.65225,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.46675,
- "y_dimension": 18.77496,
- "z_dimension": 21.58455,
- "creation_date": "2024-08-07",
+ "x_dimension": 7.670442,
+ "y_dimension": 23.32584,
+ "z_dimension": 13.02857,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -158,41 +159,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-1D",
- "description": "18.68413 x 21.65043 x 18.2693 millimeter, 18.2693 millimeter",
+ "description": "20.44936 x 20.00001 x 14.53067 millimeter, 14.53067 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM685.VJVH.785",
"section_count": 0,
- "section_size": 18.2693,
+ "section_size": 14.53067,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D1",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D1",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D1_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D1_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D1",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D1",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 9.524694,
+ "x_translation": 13.35607,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 21.96647,
+ "y_translation": 10.76792,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 52.36083,
- "placement_date": "2024-08-07"
+ "z_translation": 49.9012,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 18.68413,
- "y_dimension": 21.65043,
- "z_dimension": 18.2693,
- "creation_date": "2024-08-07",
+ "x_dimension": 20.44936,
+ "y_dimension": 20.00001,
+ "z_dimension": 14.53067,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -205,41 +206,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-2A",
- "description": "16.93247 x 25.03784 x 24.15895 millimeter, 24.15895 millimeter",
+ "description": "25.05836 x 19.0414 x 21.70672 millimeter, 21.70672 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM833.JPZG.893",
"section_count": 0,
- "section_size": 24.15895,
+ "section_size": 21.70672,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A2",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A2",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A2_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A2_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A2",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A2",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 21.79623,
+ "x_translation": 19.41213,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 12.02745,
+ "y_translation": 12.83666,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 46.90573,
- "placement_date": "2024-08-07"
+ "z_translation": 63.19122,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 16.93247,
- "y_dimension": 25.03784,
- "z_dimension": 24.15895,
- "creation_date": "2024-08-07",
+ "x_dimension": 25.05836,
+ "y_dimension": 19.0414,
+ "z_dimension": 21.70672,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -252,41 +253,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-2B",
- "description": "16.4752 x 28.15749 x 22.76353 millimeter, 22.76353 millimeter",
+ "description": "14.75269 x 20.59827 x 22.13033 millimeter, 22.13033 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM329.BFHH.463",
"section_count": 0,
- "section_size": 22.76353,
+ "section_size": 22.13033,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B2",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B2",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B2_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B2_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B2",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B2",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 21.56759,
+ "x_translation": 7.157658,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 23.81659,
+ "y_translation": 19.66631,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 46.20801,
- "placement_date": "2024-08-07"
+ "z_translation": 62.20576,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 16.4752,
- "y_dimension": 28.15749,
- "z_dimension": 22.76353,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.75269,
+ "y_dimension": 20.59827,
+ "z_dimension": 22.13033,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -299,41 +300,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-2C",
- "description": "26.87598 x 17.19156 x 26.16676 millimeter, 26.16676 millimeter",
+ "description": "10.50723 x 18.548 x 18.98925 millimeter, 18.98925 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM958.LBJH.999",
"section_count": 0,
- "section_size": 26.16676,
+ "section_size": 18.98925,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C2",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C2",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C2_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C2_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C2",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C2",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 15.42351,
+ "x_translation": 9.280391,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 30.83851,
+ "y_translation": 23.15272,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 47.90963,
- "placement_date": "2024-08-07"
+ "z_translation": 51.34278,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 26.87598,
- "y_dimension": 17.19156,
- "z_dimension": 26.16676,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.50723,
+ "y_dimension": 18.548,
+ "z_dimension": 18.98925,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001069"
@@ -345,41 +346,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-2D",
- "description": "27.00621 x 25.45501 x 22.20978 millimeter, 22.20978 millimeter",
+ "description": "28.17411 x 20.17442 x 20.46209 millimeter, 20.46209 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM377.WDKH.475",
"section_count": 0,
- "section_size": 22.20978,
+ "section_size": 20.46209,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D2",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D2",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D2_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D2_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D2",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D2",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 15.39918,
+ "x_translation": 17.61142,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 21.37772,
+ "y_translation": 13.93378,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 45.93114,
- "placement_date": "2024-08-07"
+ "z_translation": 50.60636,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 27.00621,
- "y_dimension": 25.45501,
- "z_dimension": 22.20978,
- "creation_date": "2024-08-07",
+ "x_dimension": 28.17411,
+ "y_dimension": 20.17442,
+ "z_dimension": 20.46209,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -392,43 +393,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-3A",
- "description": "21.48101 x 26.64561 x 29.7174 millimeter, 29.7174 millimeter",
+ "description": "26.54209 x 19.94796 x 20.42685 millimeter, 20.42685 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM869.FJXG.495",
"section_count": 0,
- "section_size": 29.7174,
+ "section_size": 20.42685,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A3",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A3",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A3_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A3_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A3",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A3",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 27.48785,
+ "x_translation": 22.24336,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 12.6345,
+ "y_translation": 18.09279,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 47.91651,
- "placement_date": "2024-08-07"
+ "z_translation": 65.47123,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 21.48101,
- "y_dimension": 26.64561,
- "z_dimension": 29.7174,
- "creation_date": "2024-08-07",
+ "x_dimension": 26.54209,
+ "y_dimension": 19.94796,
+ "z_dimension": 20.42685,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
@@ -439,44 +441,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-3B",
- "description": "16.50789 x 32.14452 x 29.23881 millimeter, 29.23881 millimeter",
+ "description": "16.07931 x 16.2442 x 23.75876 millimeter, 23.75876 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM927.QBZP.837",
"section_count": 0,
- "section_size": 29.23881,
+ "section_size": 23.75876,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B3",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B3",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B3_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B3_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B3",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B3",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 25.00129,
+ "x_translation": 9.40549,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 26.27479,
+ "y_translation": 25.00872,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 47.67722,
- "placement_date": "2024-08-07"
+ "z_translation": 62.66468,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 16.50789,
- "y_dimension": 32.14452,
- "z_dimension": 29.23881,
- "creation_date": "2024-08-07",
+ "x_dimension": 16.07931,
+ "y_dimension": 16.2442,
+ "z_dimension": 23.75876,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -486,41 +487,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-3C",
- "description": "22.10306 x 18.45074 x 20.82062 millimeter, 20.82062 millimeter",
+ "description": "10.84985 x 11.88912 x 22.60559 millimeter, 22.60559 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM293.ZZWZ.357",
"section_count": 0,
- "section_size": 20.82062,
+ "section_size": 22.60559,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C3",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C3",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C3_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C3_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C3",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C3",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 21.39322,
+ "x_translation": 12.02022,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 33.77173,
+ "y_translation": 28.30192,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 43.46812,
- "placement_date": "2024-08-07"
+ "z_translation": 52.66937,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.10306,
- "y_dimension": 18.45074,
- "z_dimension": 20.82062,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.84985,
+ "y_dimension": 11.88912,
+ "z_dimension": 22.60559,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001069"
@@ -532,41 +533,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-3D",
- "description": "25.90818 x 25.59769 x 15.24159 millimeter, 15.24159 millimeter",
+ "description": "27.83724 x 18.90595 x 23.36139 millimeter, 23.36139 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM442.TVMK.429",
"section_count": 0,
- "section_size": 15.24159,
+ "section_size": 23.36139,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D3",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D3",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D3_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D3_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D3",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D3",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 23.64756,
+ "x_translation": 21.86842,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 20.49328,
+ "y_translation": 18.6138,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 40.6786,
- "placement_date": "2024-08-07"
+ "z_translation": 52.29147,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 25.90818,
- "y_dimension": 25.59769,
- "z_dimension": 15.24159,
- "creation_date": "2024-08-07",
+ "x_dimension": 27.83724,
+ "y_dimension": 18.90595,
+ "z_dimension": 23.36139,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -579,41 +580,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-4A",
- "description": "24.47658 x 27.81569 x 32.15565 millimeter, 32.15565 millimeter",
+ "description": "24.98519 x 19.88768 x 17.8208 millimeter, 17.8208 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM484.CKHP.546",
"section_count": 0,
- "section_size": 32.15565,
+ "section_size": 17.8208,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A4",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A4",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A4_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A4_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A4",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A4",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 32.90763,
+ "x_translation": 24.75951,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 13.92815,
+ "y_translation": 21.31966,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 49.13563,
- "placement_date": "2024-08-07"
+ "z_translation": 68.50054,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 24.47658,
- "y_dimension": 27.81569,
- "z_dimension": 32.15565,
- "creation_date": "2024-08-07",
+ "x_dimension": 24.98519,
+ "y_dimension": 19.88768,
+ "z_dimension": 17.8208,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.org/sig/ont/fma/fma14517",
@@ -627,45 +628,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-4B",
- "description": "14.93223 x 35.02486 x 32.50026 millimeter, 32.50026 millimeter",
+ "description": "15.59904 x 14.51795 x 25.62202 millimeter, 25.62202 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM385.FTLT.493",
"section_count": 0,
- "section_size": 32.50026,
+ "section_size": 25.62202,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B4",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B4",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B4_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B4_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B4",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B4",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 28.13546,
+ "x_translation": 12.2857,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 29.93,
+ "y_translation": 27.68804,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 49.30794,
- "placement_date": "2024-08-07"
+ "z_translation": 63.67618,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.93223,
- "y_dimension": 35.02486,
- "z_dimension": 32.50026,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.59904,
+ "y_dimension": 14.51795,
+ "z_dimension": 25.62202,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -675,41 +674,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-4C",
- "description": "19.35382 x 22.25991 x 21.37802 millimeter, 21.37802 millimeter",
+ "description": "12.73274 x 13.02064 x 23.83558 millimeter, 23.83558 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM279.ZBFG.324",
"section_count": 0,
- "section_size": 21.37802,
+ "section_size": 23.83558,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C4",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C4",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C4_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C4_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C4",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C4",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 25.27183,
+ "x_translation": 13.71885,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.08726,
+ "y_translation": 30.44516,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 43.74682,
- "placement_date": "2024-08-07"
+ "z_translation": 53.51109,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 19.35382,
- "y_dimension": 22.25991,
- "z_dimension": 21.37802,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.73274,
+ "y_dimension": 13.02064,
+ "z_dimension": 23.83558,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001069"
@@ -721,41 +720,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-4D",
- "description": "26.55454 x 21.56894 x 15.64583 millimeter, 15.64583 millimeter",
+ "description": "25.2617 x 16.66126 x 23.87931 millimeter, 23.87931 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM674.MWZD.688",
"section_count": 0,
- "section_size": 15.64583,
+ "section_size": 23.87931,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D4",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D4",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D4_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D4_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D4",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D4",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 29.99685,
+ "x_translation": 26.90194,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 18.42004,
+ "y_translation": 22.93287,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 40.88073,
- "placement_date": "2024-08-07"
+ "z_translation": 53.48923,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 26.55454,
- "y_dimension": 21.56894,
- "z_dimension": 15.64583,
- "creation_date": "2024-08-07",
+ "x_dimension": 25.2617,
+ "y_dimension": 16.66126,
+ "z_dimension": 23.87931,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -768,46 +767,47 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-5A",
- "description": "25.00856 x 28.65531 x 30.69102 millimeter, 30.69102 millimeter",
+ "description": "21.42328 x 19.09644 x 20.91861 millimeter, 20.91861 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM883.PSDQ.427",
"section_count": 0,
- "section_size": 30.69102,
+ "section_size": 20.91861,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A5",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A5",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A5_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A5_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A5",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A5",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 37.38143,
+ "x_translation": 26.54148,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 16.75547,
+ "y_translation": 23.57457,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 51.37202,
- "placement_date": "2024-08-07"
+ "z_translation": 68.95792,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 25.00856,
- "y_dimension": 28.65531,
- "z_dimension": 30.69102,
- "creation_date": "2024-08-07",
+ "x_dimension": 21.42328,
+ "y_dimension": 19.09644,
+ "z_dimension": 20.91861,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0010373",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -816,45 +816,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-5B",
- "description": "11.81953 x 35.40075 x 33.46983 millimeter, 33.46983 millimeter",
+ "description": "15.50318 x 14.06203 x 26.57732 millimeter, 26.57732 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM527.NKKJ.929",
"section_count": 0,
- "section_size": 33.46983,
+ "section_size": 26.57732,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B5",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B5",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B5_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B5_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B5",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B5",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 30.78691,
+ "x_translation": 14.78412,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 32.99266,
+ "y_translation": 29.12477,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 52.76142,
- "placement_date": "2024-08-07"
+ "z_translation": 65.62079,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 11.81953,
- "y_dimension": 35.40075,
- "z_dimension": 33.46983,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.50318,
+ "y_dimension": 14.06203,
+ "z_dimension": 26.57732,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -864,41 +862,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-5C",
- "description": "19.00594 x 25.10348 x 20.61592 millimeter, 20.61592 millimeter",
+ "description": "14.80355 x 15.77949 x 23.44616 millimeter, 23.44616 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM973.ZLKQ.336",
"section_count": 0,
- "section_size": 20.61592,
+ "section_size": 23.44616,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C5",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C5",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C5_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C5_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C5",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C5",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 26.66973,
+ "x_translation": 15.38187,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 39.66095,
+ "y_translation": 32.37578,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 44.48828,
- "placement_date": "2024-08-07"
+ "z_translation": 53.7058,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 19.00594,
- "y_dimension": 25.10348,
- "z_dimension": 20.61592,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.80355,
+ "y_dimension": 15.77949,
+ "z_dimension": 23.44616,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001069"
@@ -910,41 +908,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-5D",
- "description": "31.26267 x 22.9088 x 15.12933 millimeter, 15.12933 millimeter",
+ "description": "22.04794 x 15.8066 x 23.44616 millimeter, 23.44616 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM876.MXVS.964",
"section_count": 0,
- "section_size": 15.12933,
+ "section_size": 23.44616,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D5",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D5",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D5_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D5_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D5",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D5",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 32.7981,
+ "x_translation": 30.42256,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 19.62873,
+ "y_translation": 25.21948,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 40.93829,
- "placement_date": "2024-08-07"
+ "z_translation": 53.7058,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 31.26267,
- "y_dimension": 22.9088,
- "z_dimension": 15.12933,
- "creation_date": "2024-08-07",
+ "x_dimension": 22.04794,
+ "y_dimension": 15.8066,
+ "z_dimension": 23.44616,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0010373",
@@ -957,47 +955,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-6A",
- "description": "23.23582 x 28.98608 x 28.02421 millimeter, 28.02421 millimeter",
+ "description": "16.9731 x 16.73185 x 26.2815 millimeter, 26.2815 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM246.CHBX.834",
"section_count": 0,
- "section_size": 28.02421,
+ "section_size": 26.2815,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A6",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A6",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A6_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A6_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A6",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A6",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 40.83487,
+ "x_translation": 28.10507,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 21.30381,
+ "y_translation": 26.02313,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 54.61911,
- "placement_date": "2024-08-07"
+ "z_translation": 68.51628,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 23.23582,
- "y_dimension": 28.98608,
- "z_dimension": 28.02421,
- "creation_date": "2024-08-07",
+ "x_dimension": 16.9731,
+ "y_dimension": 16.73185,
+ "z_dimension": 26.2815,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1006,45 +1003,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-6B",
- "description": "9.52353 x 35.04858 x 33.04936 millimeter, 33.04936 millimeter",
+ "description": "15.61988 x 14.92464 x 25.77002 millimeter, 25.77002 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM766.MZBD.225",
"section_count": 0,
- "section_size": 33.04936,
+ "section_size": 25.77002,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B6",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B6",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B6_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B6_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B6",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B6",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 33.97873,
+ "x_translation": 17.10696,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 35.41405,
+ "y_translation": 31.30201,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 57.13169,
- "placement_date": "2024-08-07"
+ "z_translation": 68.6242,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 9.52353,
- "y_dimension": 35.04858,
- "z_dimension": 33.04936,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.61988,
+ "y_dimension": 14.92464,
+ "z_dimension": 25.77002,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1054,43 +1049,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-6C",
- "description": "20.57776 x 27.28193 x 22.2191 millimeter, 22.2191 millimeter",
+ "description": "15.49709 x 15.75102 x 21.27968 millimeter, 21.27968 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM757.TRPD.633",
"section_count": 0,
- "section_size": 22.2191,
+ "section_size": 21.27968,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C6",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C6",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C6_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C6_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C6",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C6",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 27.45565,
+ "x_translation": 17.16836,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.96917,
+ "y_translation": 35.2654,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 45.28987,
- "placement_date": "2024-08-07"
+ "z_translation": 54.42918,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 20.57776,
- "y_dimension": 27.28193,
- "z_dimension": 22.2191,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.49709,
+ "y_dimension": 15.75102,
+ "z_dimension": 21.27968,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1100,44 +1096,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-6D",
- "description": "34.74298 x 24.92807 x 13.85868 millimeter, 13.85868 millimeter",
+ "description": "19.19713 x 13.31992 x 21.27968 millimeter, 21.27968 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM557.HCGR.966",
"section_count": 0,
- "section_size": 13.85868,
+ "section_size": 21.27968,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D6",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D6",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D6_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D6_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D6",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D6",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 34.53826,
+ "x_translation": 32.13428,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 23.33281,
+ "y_translation": 27.7291,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 40.30297,
- "placement_date": "2024-08-07"
+ "z_translation": 54.42918,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 34.74298,
- "y_dimension": 24.92807,
- "z_dimension": 13.85868,
- "creation_date": "2024-08-07",
+ "x_dimension": 19.19713,
+ "y_dimension": 13.31992,
+ "z_dimension": 21.27968,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0010373",
+ "http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1147,46 +1143,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-7A",
- "description": "19.06462 x 30.83968 x 24.99778 millimeter, 24.99778 millimeter",
+ "description": "10.65041 x 14.47059 x 28.48925 millimeter, 28.48925 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM649.JXXJ.663",
"section_count": 0,
- "section_size": 24.99778,
+ "section_size": 28.48925,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A7",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A7",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A7_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A7_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A7",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A7",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 43.24037,
+ "x_translation": 28.90337,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 26.29539,
+ "y_translation": 27.98712,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 57.39601,
- "placement_date": "2024-08-07"
+ "z_translation": 68.9107,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 19.06462,
- "y_dimension": 30.83968,
- "z_dimension": 24.99778,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.65041,
+ "y_dimension": 14.47059,
+ "z_dimension": 28.48925,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1196,46 +1190,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-7B",
- "description": "9.732221 x 34.27817 x 32.22236 millimeter, 32.22236 millimeter",
+ "description": "15.7211 x 15.60163 x 24.07525 millimeter, 24.07525 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM585.QZJW.757",
"section_count": 0,
- "section_size": 32.22236,
+ "section_size": 24.07525,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B7",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B7",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B7_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B7_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B7",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B7",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 38.57417,
+ "x_translation": 19.54605,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 36.44359,
+ "y_translation": 33.61419,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 61.0083,
- "placement_date": "2024-08-07"
+ "z_translation": 71.08983,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 9.732221,
- "y_dimension": 34.27817,
- "z_dimension": 32.22236,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.7211,
+ "y_dimension": 15.60163,
+ "z_dimension": 24.07525,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1245,41 +1237,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-7C",
- "description": "20.1034 x 26.55478 x 24.90897 millimeter, 24.90897 millimeter",
+ "description": "15.64326 x 15.11347 x 19.14123 millimeter, 19.14123 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM976.ZRGZ.727",
"section_count": 0,
- "section_size": 24.90897,
+ "section_size": 19.14123,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C7",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C7",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C7_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C7_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C7",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C7",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 30.0486,
+ "x_translation": 19.45225,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 44.52683,
+ "y_translation": 38.02356,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 47.17871,
- "placement_date": "2024-08-07"
+ "z_translation": 54.18733,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 20.1034,
- "y_dimension": 26.55478,
- "z_dimension": 24.90897,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.64326,
+ "y_dimension": 15.11347,
+ "z_dimension": 19.14123,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.org/sig/ont/fma/fma14517",
@@ -1292,44 +1284,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-7D",
- "description": "32.77578 x 28.01369 x 14.42352 millimeter, 14.42352 millimeter",
+ "description": "17.01128 x 10.46302 x 19.84964 millimeter, 19.84964 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM546.DGDM.997",
"section_count": 0,
- "section_size": 14.42352,
+ "section_size": 19.84964,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D7",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D7",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D7_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D7_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D7",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D7",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 36.38479,
+ "x_translation": 33.10215,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 27.70839,
+ "y_translation": 29.99091,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 41.48147,
- "placement_date": "2024-08-07"
+ "z_translation": 53.83312,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 32.77578,
- "y_dimension": 28.01369,
- "z_dimension": 14.42352,
- "creation_date": "2024-08-07",
+ "x_dimension": 17.01128,
+ "y_dimension": 10.46302,
+ "z_dimension": 19.84964,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1339,46 +1330,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-8A",
- "description": "15.89868 x 33.31616 x 23.53843 millimeter, 23.53843 millimeter",
+ "description": "5.215724 x 12.38644 x 28.12308 millimeter, 28.12308 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM553.NXDC.839",
"section_count": 0,
- "section_size": 23.53843,
+ "section_size": 28.12308,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A8",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A8",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A8_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A8_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A8",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A8",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 44.81092,
+ "x_translation": 29.34013,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.57491,
+ "y_translation": 29.56371,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 58.49815,
- "placement_date": "2024-08-07"
+ "z_translation": 69.09378,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.89868,
- "y_dimension": 33.31616,
- "z_dimension": 23.53843,
- "creation_date": "2024-08-07",
+ "x_dimension": 5.215724,
+ "y_dimension": 12.38644,
+ "z_dimension": 28.12308,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1388,46 +1377,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-8B",
- "description": "10.91636 x 33.16087 x 30.40085 millimeter, 30.40085 millimeter",
+ "description": "15.66939 x 16.27045 x 21.29747 millimeter, 21.29747 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM729.SWHH.556",
"section_count": 0,
- "section_size": 30.40085,
+ "section_size": 21.29747,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B8",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B8",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B8_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B8_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B8",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B8",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 43.58477,
+ "x_translation": 22.91309,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.00224,
+ "y_translation": 36.01373,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 63.89365,
- "placement_date": "2024-08-07"
+ "z_translation": 72.47872,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 10.91636,
- "y_dimension": 33.16087,
- "z_dimension": 30.40085,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.66939,
+ "y_dimension": 16.27045,
+ "z_dimension": 21.29747,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1437,41 +1424,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-8C",
- "description": "16.78042 x 23.9063 x 27.62492 millimeter, 27.62492 millimeter",
+ "description": "14.8171 x 15.53998 x 18.81834 millimeter, 18.81834 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM982.QJXL.457",
"section_count": 0,
- "section_size": 27.62492,
+ "section_size": 18.81834,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C8",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C8",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C8_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C8_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C8",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C8",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 34.98652,
+ "x_translation": 22.25805,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 46.22791,
+ "y_translation": 40.37228,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 50.57162,
- "placement_date": "2024-08-07"
+ "z_translation": 54.83176,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 16.78042,
- "y_dimension": 23.9063,
- "z_dimension": 27.62492,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.8171,
+ "y_dimension": 15.53998,
+ "z_dimension": 18.81834,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.org/sig/ont/fma/fma14517",
@@ -1484,44 +1471,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-8D",
- "description": "25.80186 x 31.49818 x 15.61849 millimeter, 15.61849 millimeter",
+ "description": "15.3618 x 7.788592 x 19.89856 millimeter, 19.89856 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM358.RPHN.988",
"section_count": 0,
- "section_size": 15.61849,
+ "section_size": 19.89856,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D8",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D8",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D8_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D8_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D8",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D8",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 39.85933,
+ "x_translation": 32.66889,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 32.48389,
+ "y_translation": 31.86263,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 44.51974,
- "placement_date": "2024-08-07"
+ "z_translation": 53.85758,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 25.80186,
- "y_dimension": 31.49818,
- "z_dimension": 15.61849,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.3618,
+ "y_dimension": 7.788592,
+ "z_dimension": 19.89856,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0010373",
+ "http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1531,46 +1518,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-9A",
- "description": "11.95185 x 34.03014 x 21.5031 millimeter, 21.5031 millimeter",
+ "description": "7.570677 x 11.14868 x 24.34271 millimeter, 24.34271 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM682.GXDW.332",
"section_count": 0,
- "section_size": 21.5031,
+ "section_size": 24.34271,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A9",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A9",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A9_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A9_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A9",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A9",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 44.57425,
+ "x_translation": 30.51761,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 36.95324,
+ "y_translation": 30.76955,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 59.82672,
- "placement_date": "2024-08-07"
+ "z_translation": 70.92978,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 11.95185,
- "y_dimension": 34.03014,
- "z_dimension": 21.5031,
- "creation_date": "2024-08-07",
+ "x_dimension": 7.570677,
+ "y_dimension": 11.14868,
+ "z_dimension": 24.34271,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0010373",
"http://purl.obolibrary.org/obo/UBERON_0001069"
]
}
@@ -1580,46 +1565,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-9B",
- "description": "12.82208 x 31.34171 x 28.56637 millimeter, 28.56637 millimeter",
+ "description": "14.47675 x 17.5 x 19.29427 millimeter, 19.29427 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM625.GBWK.235",
"section_count": 0,
- "section_size": 28.56637,
+ "section_size": 19.29427,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B9",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B9",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B9_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B9_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B9",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B9",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 48.37932,
+ "x_translation": 26.46347,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 38.29745,
+ "y_translation": 38.43727,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 66.61217,
- "placement_date": "2024-08-07"
+ "z_translation": 73.454,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 12.82208,
- "y_dimension": 31.34171,
- "z_dimension": 28.56637,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.47675,
+ "y_dimension": 17.5,
+ "z_dimension": 19.29427,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1628,46 +1613,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-9C",
- "description": "14.17352 x 21.05946 x 30.66117 millimeter, 30.66117 millimeter",
+ "description": "13.79828 x 16.92787 x 17.67496 millimeter, 17.67496 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM946.VMFS.285",
"section_count": 0,
- "section_size": 30.66117,
+ "section_size": 17.67496,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C9",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C9",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C9_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C9_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C9",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C9",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 40.67744,
+ "x_translation": 25.47016,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 47.65133,
+ "y_translation": 42.46091,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 54.42888,
- "placement_date": "2024-08-07"
+ "z_translation": 57.35183,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.17352,
- "y_dimension": 21.05946,
- "z_dimension": 30.66117,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.79828,
+ "y_dimension": 16.92787,
+ "z_dimension": 17.67496,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1676,45 +1661,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-9D",
- "description": "17.05572 x 32.96987 x 16.80029 millimeter, 16.80029 millimeter",
+ "description": "13.5659 x 5.400382 x 20.49279 millimeter, 20.49279 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM684.XGCJ.236",
"section_count": 0,
- "section_size": 16.80029,
+ "section_size": 20.49279,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D9",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D9",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D9_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D9_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D9",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D9",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 43.75611,
+ "x_translation": 31.77094,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.48338,
+ "y_translation": 33.6437,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 47.49844,
- "placement_date": "2024-08-07"
+ "z_translation": 55.93638,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 17.05572,
- "y_dimension": 32.96987,
- "z_dimension": 16.80029,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.5659,
+ "y_dimension": 5.400382,
+ "z_dimension": 20.49279,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0010373",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.org/sig/ont/fma/fma14517",
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1723,46 +1709,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-10A",
- "description": "15.83379 x 31.53026 x 18.85115 millimeter, 18.85115 millimeter",
+ "description": "9.701556 x 11.46153 x 18.09352 millimeter, 18.09352 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM226.VMCQ.457",
"section_count": 0,
- "section_size": 18.85115,
+ "section_size": 18.09352,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A10",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A10",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A10_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A10_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A10",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A10",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 48.18173,
+ "x_translation": 32.4465,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.23412,
+ "y_translation": 31.69334,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 61.83496,
- "placement_date": "2024-08-07"
+ "z_translation": 73.31065,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.83379,
- "y_dimension": 31.53026,
- "z_dimension": 18.85115,
- "creation_date": "2024-08-07",
+ "x_dimension": 9.701556,
+ "y_dimension": 11.46153,
+ "z_dimension": 18.09352,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1771,46 +1757,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-10B",
- "description": "15.36081 x 31.58534 x 26.55425 millimeter, 26.55425 millimeter",
+ "description": "13.27855 x 18.81767 x 16.17463 millimeter, 16.17463 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM468.BSFF.497",
"section_count": 0,
- "section_size": 26.55425,
+ "section_size": 16.17463,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B10",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B10",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B10_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B10_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B10",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B10",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 52.78433,
+ "x_translation": 29.88812,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.20658,
+ "y_translation": 40.68009,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 69.17571,
- "placement_date": "2024-08-07"
+ "z_translation": 74.27009,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.36081,
- "y_dimension": 31.58534,
- "z_dimension": 26.55425,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.27855,
+ "y_dimension": 18.81767,
+ "z_dimension": 16.17463,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1819,46 +1805,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-10C",
- "description": "14.85662 x 17.26171 x 33.82988 millimeter, 33.82988 millimeter",
+ "description": "14.02397 x 17.48305 x 14.51202 millimeter, 14.51202 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM885.NMZD.498",
"section_count": 0,
- "section_size": 33.82988,
+ "section_size": 14.51202,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C10",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C10",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C10_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C10_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C10",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C10",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 45.95591,
+ "x_translation": 28.62318,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 48.80061,
+ "y_translation": 44.094,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 57.43388,
- "placement_date": "2024-08-07"
+ "z_translation": 61.56649,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.85662,
- "y_dimension": 17.26171,
- "z_dimension": 33.82988,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.02397,
+ "y_dimension": 17.48305,
+ "z_dimension": 14.51202,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1867,45 +1853,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-10D",
- "description": "11.13045 x 30.28782 x 19.00788 millimeter, 19.00788 millimeter",
+ "description": "14.16416 x 6.680385 x 18.36298 millimeter, 18.36298 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM934.DSKM.373",
"section_count": 0,
- "section_size": 19.00788,
+ "section_size": 18.36298,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D10",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D10",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D10_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D10_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D10",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D10",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 47.05704,
+ "x_translation": 32.2898,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.85533,
+ "y_translation": 34.72711,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 50.02287,
- "placement_date": "2024-08-07"
+ "z_translation": 59.64101,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 11.13045,
- "y_dimension": 30.28782,
- "z_dimension": 19.00788,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.16416,
+ "y_dimension": 6.680385,
+ "z_dimension": 18.36298,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1914,46 +1901,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-11A",
- "description": "20.6981 x 29.48214 x 16.70971 millimeter, 16.70971 millimeter",
+ "description": "9.052129 x 12.76895 x 13.484 millimeter, 13.484 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM477.DNSQ.482",
"section_count": 0,
- "section_size": 16.70971,
+ "section_size": 13.484,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A11",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A11",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A11_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A11_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A11",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A11",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 52.9208,
+ "x_translation": 36.39487,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 42.25818,
+ "y_translation": 32.97856,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 64.00628,
- "placement_date": "2024-08-07"
+ "z_translation": 75.00964,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 20.6981,
- "y_dimension": 29.48214,
- "z_dimension": 16.70971,
- "creation_date": "2024-08-07",
+ "x_dimension": 9.052129,
+ "y_dimension": 12.76895,
+ "z_dimension": 13.484,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -1962,45 +1949,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-11B",
- "description": "17.59158 x 29.87701 x 23.57506 millimeter, 23.57506 millimeter",
+ "description": "12.63758 x 18.93326 x 14.41355 millimeter, 14.41355 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM777.XKJR.955",
"section_count": 0,
- "section_size": 23.57506,
+ "section_size": 14.41355,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B11",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B11",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B11_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B11_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B11",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B11",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 57.16774,
+ "x_translation": 33.00047,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 42.06074,
+ "y_translation": 42.8905,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 71.31434,
- "placement_date": "2024-08-07"
+ "z_translation": 74.54487,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 17.59158,
- "y_dimension": 29.87701,
- "z_dimension": 23.57506,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.63758,
+ "y_dimension": 18.93326,
+ "z_dimension": 14.41355,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.org/sig/ont/fma/fma14517"
+ "http://purl.org/sig/ont/fma/fma14517",
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2009,46 +1997,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-11C",
- "description": "17.32449 x 13.02914 x 36.18464 millimeter, 36.18464 millimeter",
+ "description": "14.94849 x 16.81821 x 11.91886 millimeter, 11.91886 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM932.BDDF.488",
"section_count": 0,
- "section_size": 36.18464,
+ "section_size": 11.91886,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C11",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C11",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C11_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C11_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C11",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C11",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 51.70329,
+ "x_translation": 31.74208,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 50.48468,
+ "y_translation": 45.50497,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 59.20577,
- "placement_date": "2024-08-07"
+ "z_translation": 64.48755,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 17.32449,
- "y_dimension": 13.02914,
- "z_dimension": 36.18464,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.94849,
+ "y_dimension": 16.81821,
+ "z_dimension": 11.91886,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2057,46 +2045,46 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-11D",
- "description": "10.12812 x 23.73535 x 22.46182 millimeter, 22.46182 millimeter",
+ "description": "15.98774 x 9.49175 x 14.00876 millimeter, 14.00876 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM654.BRMR.499",
"section_count": 0,
- "section_size": 22.46182,
+ "section_size": 14.00876,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D11",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D11",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D11_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D11_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D11",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D11",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 48.18962,
+ "x_translation": 35.74755,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 45.13157,
+ "y_translation": 35.89903,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 52.26063,
- "placement_date": "2024-08-07"
+ "z_translation": 63.4426,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 10.12812,
- "y_dimension": 23.73535,
- "z_dimension": 22.46182,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.98774,
+ "y_dimension": 9.49175,
+ "z_dimension": 14.00876,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001069",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2105,46 +2093,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-12A",
- "description": "27.17972 x 28.41219 x 15.44269 millimeter, 15.44269 millimeter",
+ "description": "6.785719 x 13.91157 x 14.09733 millimeter, 14.09733 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM334.CKDR.378",
"section_count": 0,
- "section_size": 15.44269,
+ "section_size": 14.09733,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A12",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A12",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A12_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A12_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A12",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A12",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 57.39596,
+ "x_translation": 42.06694,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.84659,
+ "y_translation": 35.23141,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 66.12879,
- "placement_date": "2024-08-07"
+ "z_translation": 74.04659,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 27.17972,
- "y_dimension": 28.41219,
- "z_dimension": 15.44269,
- "creation_date": "2024-08-07",
+ "x_dimension": 6.785719,
+ "y_dimension": 13.91157,
+ "z_dimension": 14.09733,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2153,45 +2140,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-12B",
- "description": "18.77989 x 28.56779 x 19.61034 millimeter, 19.61034 millimeter",
+ "description": "12.98046 x 17.11394 x 13.48021 millimeter, 13.48021 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM282.HRBR.725",
"section_count": 0,
- "section_size": 19.61034,
+ "section_size": 13.48021,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B12",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B12",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B12_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B12_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B12",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B12",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 62.64363,
+ "x_translation": 36.04741,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.76879,
+ "y_translation": 45.32241,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 73.29671,
- "placement_date": "2024-08-07"
+ "z_translation": 74.35515,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 18.77989,
- "y_dimension": 28.56779,
- "z_dimension": 19.61034,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.98046,
+ "y_dimension": 17.11394,
+ "z_dimension": 13.48021,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.org/sig/ont/fma/fma14517"
+ "http://purl.org/sig/ont/fma/fma14517",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2200,46 +2187,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-12C",
- "description": "19.65636 x 15.78938 x 36.09251 millimeter, 36.09251 millimeter",
+ "description": "14.52462 x 15.53656 x 13.61611 millimeter, 13.61611 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM636.FSWJ.233",
"section_count": 0,
- "section_size": 36.09251,
+ "section_size": 13.61611,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C12",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C12",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C12_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C12_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C12",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C12",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 58.70791,
+ "x_translation": 35.27533,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 49.33627,
+ "y_translation": 46.68001,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 60.03839,
- "placement_date": "2024-08-07"
+ "z_translation": 63.77241,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 19.65636,
- "y_dimension": 15.78938,
- "z_dimension": 36.09251,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.52462,
+ "y_dimension": 15.53656,
+ "z_dimension": 13.61611,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2248,46 +2234,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-12D",
- "description": "17.47362 x 17.35964 x 26.25855 millimeter, 26.25855 millimeter",
+ "description": "16.04267 x 11.35172 x 11.80382 millimeter, 11.80382 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM942.QCTR.435",
"section_count": 0,
- "section_size": 26.25855,
+ "section_size": 11.80382,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D12",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D12",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D12_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D12_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D12",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D12",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 51.95844,
+ "x_translation": 41.25125,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 47.37286,
+ "y_translation": 36.96014,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 54.42972,
- "placement_date": "2024-08-07"
+ "z_translation": 64.67855,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 17.47362,
- "y_dimension": 17.35964,
- "z_dimension": 26.25855,
- "creation_date": "2024-08-07",
+ "x_dimension": 16.04267,
+ "y_dimension": 11.35172,
+ "z_dimension": 11.80382,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2296,45 +2281,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-13A",
- "description": "30.40529 x 26.99384 x 14.1131 millimeter, 14.1131 millimeter",
+ "description": "8.527731 x 13.82541 x 17.4302 millimeter, 17.4302 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM664.CBCV.737",
"section_count": 0,
- "section_size": 14.1131,
+ "section_size": 17.4302,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A13",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A13",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A13_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A13_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A13",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A13",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 64.49267,
+ "x_translation": 46.41826,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.96121,
+ "y_translation": 38.39061,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 68.00555,
- "placement_date": "2024-08-07"
+ "z_translation": 71.2702,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 30.40529,
- "y_dimension": 26.99384,
- "z_dimension": 14.1131,
- "creation_date": "2024-08-07",
+ "x_dimension": 8.527731,
+ "y_dimension": 13.82541,
+ "z_dimension": 17.4302,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.org/sig/ont/fma/fma14517"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2343,43 +2327,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-13B",
- "description": "19.00007 x 26.96229 x 15.11282 millimeter, 15.11282 millimeter",
+ "description": "13.01732 x 14.75925 x 12.43657 millimeter, 12.43657 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM425.ZVGH.827",
"section_count": 0,
- "section_size": 15.11282,
+ "section_size": 12.43657,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B13",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B13",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B13_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B13_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B13",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B13",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 70.19529,
+ "x_translation": 38.98884,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.97698,
+ "y_translation": 48.41787,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 75.11541,
- "placement_date": "2024-08-07"
+ "z_translation": 73.87727,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 19.00007,
- "y_dimension": 26.96229,
- "z_dimension": 15.11282,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.01732,
+ "y_dimension": 14.75925,
+ "z_dimension": 12.43657,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
@@ -2389,43 +2374,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-13C",
- "description": "22.53854 x 18.49525 x 33.65416 millimeter, 33.65416 millimeter",
+ "description": "15.22509 x 15.08666 x 14.94565 millimeter, 14.94565 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM395.JSFQ.926",
"section_count": 0,
- "section_size": 33.65416,
+ "section_size": 14.94565,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C13",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C13",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C13_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C13_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C13",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C13",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 66.96034,
+ "x_translation": 39.32236,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 48.28234,
+ "y_translation": 48.32555,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 61.25756,
- "placement_date": "2024-08-07"
+ "z_translation": 63.10764,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.53854,
- "y_dimension": 18.49525,
- "z_dimension": 33.65416,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.22509,
+ "y_dimension": 15.08666,
+ "z_dimension": 14.94565,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.org/sig/ont/fma/fma14517",
"http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
@@ -2435,46 +2421,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-13D",
- "description": "24.17036 x 15.75493 x 27.1463 millimeter, 27.1463 millimeter",
+ "description": "13.93248 x 12.34634 x 15.75708 millimeter, 15.75708 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM687.SHQR.253",
"section_count": 0,
- "section_size": 27.1463,
+ "section_size": 15.75708,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D13",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D13",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D13_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D13_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D13",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D13",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 57.97489,
+ "x_translation": 47.32104,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 46.34815,
+ "y_translation": 39.13015,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 57.0365,
- "placement_date": "2024-08-07"
+ "z_translation": 62.70193,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 24.17036,
- "y_dimension": 15.75493,
- "z_dimension": 27.1463,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.93248,
+ "y_dimension": 12.34634,
+ "z_dimension": 15.75708,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2483,41 +2467,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-14A",
- "description": "29.00851 x 24.82175 x 12.73971 millimeter, 12.73971 millimeter",
+ "description": "9.512245 x 13.43298 x 21.98468 millimeter, 21.98468 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM324.MGBM.394",
"section_count": 0,
- "section_size": 12.73971,
+ "section_size": 21.98468,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A14",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A14",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A14_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A14_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A14",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A14",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 73.87121,
+ "x_translation": 50.11089,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 32.44558,
+ "y_translation": 41.48343,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 68.69224,
- "placement_date": "2024-08-07"
+ "z_translation": 67.36212,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 29.00851,
- "y_dimension": 24.82175,
- "z_dimension": 12.73971,
- "creation_date": "2024-08-07",
+ "x_dimension": 9.512245,
+ "y_dimension": 13.43298,
+ "z_dimension": 21.98468,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2529,41 +2513,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-14B",
- "description": "17.88962 x 23.48218 x 10.73709 millimeter, 10.73709 millimeter",
+ "description": "13.6284 x 12.96094 x 12.39173 millimeter, 12.39173 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM788.QJCW.535",
"section_count": 0,
- "section_size": 10.73709,
+ "section_size": 12.39173,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B14",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B14",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B14_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B14_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B14",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B14",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 79.00488,
+ "x_translation": 42.44157,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 33.11537,
+ "y_translation": 51.68602,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 75.97819,
- "placement_date": "2024-08-07"
+ "z_translation": 72.76355,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 17.88962,
- "y_dimension": 23.48218,
- "z_dimension": 10.73709,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.6284,
+ "y_dimension": 12.96094,
+ "z_dimension": 12.39173,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2575,41 +2559,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-14C",
- "description": "23.88882 x 19.38347 x 29.28367 millimeter, 29.28367 millimeter",
+ "description": "16.90214 x 14.99164 x 16.58815 millimeter, 16.58815 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM767.VGMG.745",
"section_count": 0,
- "section_size": 29.28367,
+ "section_size": 16.58815,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C14",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C14",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C14_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C14_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C14",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C14",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 74.94723,
+ "x_translation": 43.6717,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 47.83823,
+ "y_translation": 50.69708,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 62.1692,
- "placement_date": "2024-08-07"
+ "z_translation": 60.98163,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 23.88882,
- "y_dimension": 19.38347,
- "z_dimension": 29.28367,
- "creation_date": "2024-08-07",
+ "x_dimension": 16.90214,
+ "y_dimension": 14.99164,
+ "z_dimension": 16.58815,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2621,46 +2605,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-14D",
- "description": "26.85639 x 22.18424 x 24.63705 millimeter, 24.63705 millimeter",
+ "description": "12.83798 x 12.41383 x 20.69156 millimeter, 20.69156 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM352.VWZK.846",
"section_count": 0,
- "section_size": 24.63705,
+ "section_size": 20.69156,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D14",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D14",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D14_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D14_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D14",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D14",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 65.84366,
+ "x_translation": 51.91649,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 43.1335,
+ "y_translation": 41.5208,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 59.14498,
- "placement_date": "2024-08-07"
+ "z_translation": 58.92993,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 26.85639,
- "y_dimension": 22.18424,
- "z_dimension": 24.63705,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.83798,
+ "y_dimension": 12.41383,
+ "z_dimension": 20.69156,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.org/sig/ont/fma/fma14517",
- "http://purl.obolibrary.org/obo/UBERON_0001069"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -2669,41 +2651,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-15A",
- "description": "24.3568 x 21.51533 x 14.33533 millimeter, 14.33533 millimeter",
+ "description": "10.2798 x 13.4476 x 25.48168 millimeter, 25.48168 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM838.QTSC.464",
"section_count": 0,
- "section_size": 14.33533,
+ "section_size": 25.48168,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A15",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A15",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A15_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A15_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A15",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A15",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 83.53009,
+ "x_translation": 53.79795,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 27.38883,
+ "y_translation": 43.14394,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 67.60587,
- "placement_date": "2024-08-07"
+ "z_translation": 62.98002,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 24.3568,
- "y_dimension": 21.51533,
- "z_dimension": 14.33533,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.2798,
+ "y_dimension": 13.4476,
+ "z_dimension": 25.48168,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2715,41 +2697,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-15B",
- "description": "14.93945 x 18.5466 x 9.88083 millimeter, 9.88083 millimeter",
+ "description": "13.93428 x 12.16269 x 14.77075 millimeter, 14.77075 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM295.KDDN.578",
"section_count": 0,
- "section_size": 9.88083,
+ "section_size": 14.77075,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B15",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B15",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B15_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B15_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B15",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B15",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 86.74158,
+ "x_translation": 46.42374,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 29.3868,
+ "y_translation": 53.80906,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 73.53446,
- "placement_date": "2024-08-07"
+ "z_translation": 69.94949,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.93945,
- "y_dimension": 18.5466,
- "z_dimension": 9.88083,
- "creation_date": "2024-08-07",
+ "x_dimension": 13.93428,
+ "y_dimension": 12.16269,
+ "z_dimension": 14.77075,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2761,41 +2743,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-15C",
- "description": "23.17653 x 23.63157 x 25.31224 millimeter, 25.31224 millimeter",
+ "description": "17.28723 x 13.96387 x 19.81119 millimeter, 19.81119 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM555.HCPS.767",
"section_count": 0,
- "section_size": 25.31224,
+ "section_size": 19.81119,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C15",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C15",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C15_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C15_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C15",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C15",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 80.89259,
+ "x_translation": 47.75062,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 44.55892,
+ "y_translation": 52.92113,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 60.70313,
- "placement_date": "2024-08-07"
+ "z_translation": 57.33273,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 23.17653,
- "y_dimension": 23.63157,
- "z_dimension": 25.31224,
- "creation_date": "2024-08-07",
+ "x_dimension": 17.28723,
+ "y_dimension": 13.96387,
+ "z_dimension": 19.81119,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2807,41 +2789,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-15D",
- "description": "25.54837 x 28.36315 x 22.95231 millimeter, 22.95231 millimeter",
+ "description": "12.93277 x 12.24553 x 24.9039 millimeter, 24.9039 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM736.VNGX.794",
"section_count": 0,
- "section_size": 22.95231,
+ "section_size": 24.9039,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D15",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D15",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D15_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D15_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D15",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D15",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 73.51532,
+ "x_translation": 55.12444,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 39.5048,
+ "y_translation": 42.775,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 59.98735,
- "placement_date": "2024-08-07"
+ "z_translation": 54.11574,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 25.54837,
- "y_dimension": 28.36315,
- "z_dimension": 22.95231,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.93277,
+ "y_dimension": 12.24553,
+ "z_dimension": 24.9039,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2853,41 +2835,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-16A",
- "description": "18.55983 x 17.98205 x 15.55283 millimeter, 15.55283 millimeter",
+ "description": "10.9376 x 14.36787 x 26.16344 millimeter, 26.16344 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM935.CMXN.233",
"section_count": 0,
- "section_size": 15.55283,
+ "section_size": 26.16344,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A16",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A16",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A16_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A16_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A16",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A16",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 91.64585,
+ "x_translation": 57.87192,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 23.75211,
+ "y_translation": 43.95025,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 64.92067,
- "placement_date": "2024-08-07"
+ "z_translation": 59.04039,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 18.55983,
- "y_dimension": 17.98205,
- "z_dimension": 15.55283,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.9376,
+ "y_dimension": 14.36787,
+ "z_dimension": 26.16344,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2899,41 +2881,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-16B",
- "description": "12.48058 x 19.31364 x 10.63311 millimeter, 10.63311 millimeter",
+ "description": "12.73327 x 11.76874 x 16.74589 millimeter, 16.74589 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM796.WWBF.666",
"section_count": 0,
- "section_size": 10.63311,
+ "section_size": 16.74589,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B16",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B16",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B16_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B16_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B16",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B16",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 92.52979,
+ "x_translation": 50.71044,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 29.77031,
+ "y_translation": 54.78213,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 68.94141,
- "placement_date": "2024-08-07"
+ "z_translation": 66.1338,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 12.48058,
- "y_dimension": 19.31364,
- "z_dimension": 10.63311,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.73327,
+ "y_dimension": 11.76874,
+ "z_dimension": 16.74589,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2945,41 +2927,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-16C",
- "description": "22.70907 x 23.58887 x 24.60996 millimeter, 24.60996 millimeter",
+ "description": "16.21266 x 12.04528 x 24.52814 millimeter, 24.52814 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM825.CZWX.579",
"section_count": 0,
- "section_size": 24.60996,
+ "section_size": 24.52814,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C16",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C16",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C16_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C16_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C16",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C16",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 84.85215,
+ "x_translation": 52.0923,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.15553,
+ "y_translation": 54.64924,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 57.64854,
- "placement_date": "2024-08-07"
+ "z_translation": 53.38087,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.70907,
- "y_dimension": 23.58887,
- "z_dimension": 24.60996,
- "creation_date": "2024-08-07",
+ "x_dimension": 16.21266,
+ "y_dimension": 12.04528,
+ "z_dimension": 24.52814,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -2991,43 +2973,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-16D",
- "description": "22.52233 x 29.96679 x 22.84173 millimeter, 22.84173 millimeter",
+ "description": "12.22758 x 13.69752 x 27.99991 millimeter, 27.99991 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM755.CTKR.399",
"section_count": 0,
- "section_size": 22.84173,
+ "section_size": 27.99991,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D16",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D16",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D16_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D16_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D16",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D16",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 79.48591,
+ "x_translation": 58.5169,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 35.43228,
+ "y_translation": 43.56596,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 58.53265,
- "placement_date": "2024-08-07"
+ "z_translation": 48.56416,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.52233,
- "y_dimension": 29.96679,
- "z_dimension": 22.84173,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.22758,
+ "y_dimension": 13.69752,
+ "z_dimension": 27.99991,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
"http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
@@ -3037,45 +3020,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-17A",
- "description": "15.10817 x 15.8014 x 17.35141 millimeter, 17.35141 millimeter",
+ "description": "11.80482 x 16.56758 x 24.23501 millimeter, 24.23501 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM432.XXDB.622",
"section_count": 0,
- "section_size": 17.35141,
+ "section_size": 24.23501,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A17",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A17",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A17_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A17_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A17",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A17",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 97.94671,
+ "x_translation": 62.26062,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 21.4604,
+ "y_translation": 45.07568,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 60.57461,
- "placement_date": "2024-08-07"
+ "z_translation": 56.31853,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.10817,
- "y_dimension": 15.8014,
- "z_dimension": 17.35141,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.80482,
+ "y_dimension": 16.56758,
+ "z_dimension": 24.23501,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3084,41 +3066,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-17B",
- "description": "12.52643 x 20.46882 x 11.3411 millimeter, 11.3411 millimeter",
+ "description": "10.65496 x 12.12104 x 17.85764 millimeter, 17.85764 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM755.HBKW.434",
"section_count": 0,
- "section_size": 11.3411,
+ "section_size": 17.85764,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B17",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B17",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B17_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B17_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B17",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B17",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 97.01029,
+ "x_translation": 54.93466,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 30.47416,
+ "y_translation": 55.31918,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 63.99867,
- "placement_date": "2024-08-07"
+ "z_translation": 61.69725,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 12.52643,
- "y_dimension": 20.46882,
- "z_dimension": 11.3411,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.65496,
+ "y_dimension": 12.12104,
+ "z_dimension": 17.85764,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001150"
@@ -3130,45 +3112,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-17C",
- "description": "23.63633 x 20.5338 x 24.25462 millimeter, 24.25462 millimeter",
+ "description": "14.2206 x 12.08498 x 28.17015 millimeter, 28.17015 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM995.KHXV.747",
"section_count": 0,
- "section_size": 24.25462,
+ "section_size": 28.17015,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C17",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C17",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C17_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C17_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C17",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C17",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 88.19108,
+ "x_translation": 56.3857,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 38.20431,
+ "y_translation": 55.30115,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 54.65268,
- "placement_date": "2024-08-07"
+ "z_translation": 47.97949,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 23.63633,
- "y_dimension": 20.5338,
- "z_dimension": 24.25462,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.2206,
+ "y_dimension": 12.08498,
+ "z_dimension": 28.17015,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3177,43 +3159,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-17D",
- "description": "22.34444 x 27.99425 x 21.51359 millimeter, 21.51359 millimeter",
+ "description": "11.68009 x 14.39428 x 29.74209 millimeter, 29.74209 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM933.SVHX.434",
"section_count": 0,
- "section_size": 21.51359,
+ "section_size": 29.74209,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D17",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D17",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D17_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D17_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D17",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D17",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 84.7344,
+ "x_translation": 62.19826,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.69445,
+ "y_translation": 43.91434,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 56.02319,
- "placement_date": "2024-08-07"
+ "z_translation": 42.88981,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.34444,
- "y_dimension": 27.99425,
- "z_dimension": 21.51359,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.68009,
+ "y_dimension": 14.39428,
+ "z_dimension": 29.74209,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
"http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
@@ -3223,45 +3206,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-18A",
- "description": "15.69624 x 14.93666 x 18.86059 millimeter, 18.86059 millimeter",
+ "description": "12.80312 x 19.00402 x 21.53139 millimeter, 21.53139 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM384.KLJF.772",
"section_count": 0,
- "section_size": 18.86059,
+ "section_size": 21.53139,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A18",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A18",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A18_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A18_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A18",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A18",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 101.9869,
+ "x_translation": 66.38539,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 20.46908,
+ "y_translation": 46.97788,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 55.58877,
- "placement_date": "2024-08-07"
+ "z_translation": 54.85369,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.69624,
- "y_dimension": 14.93666,
- "z_dimension": 18.86059,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.80312,
+ "y_dimension": 19.00402,
+ "z_dimension": 21.53139,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3270,45 +3253,44 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-18B",
- "description": "14.10334 x 21.09367 x 12.89671 millimeter, 12.89671 millimeter",
+ "description": "9.142811 x 12.43746 x 19.04139 millimeter, 19.04139 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM253.KNDT.482",
"section_count": 0,
- "section_size": 12.89671,
+ "section_size": 19.04139,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B18",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B18",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B18_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B18_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B18",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B18",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 101.1905,
+ "x_translation": 58.97426,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.24993,
+ "y_translation": 56.12839,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 58.62132,
- "placement_date": "2024-08-07"
+ "z_translation": 57.16253,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.10334,
- "y_dimension": 21.09367,
- "z_dimension": 12.89671,
- "creation_date": "2024-08-07",
+ "x_dimension": 9.142811,
+ "y_dimension": 12.43746,
+ "z_dimension": 19.04139,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3317,45 +3299,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-18C",
- "description": "25.05582 x 18.00951 x 22.49789 millimeter, 22.49789 millimeter",
+ "description": "12.1267 x 12.39603 x 29.84335 millimeter, 29.84335 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM999.MHNH.368",
"section_count": 0,
- "section_size": 22.49789,
+ "section_size": 29.84335,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C18",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C18",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C18_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C18_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C18",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C18",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 92.07344,
+ "x_translation": 60.12243,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 36.72345,
+ "y_translation": 56.10768,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 51.22265,
- "placement_date": "2024-08-07"
+ "z_translation": 41.58846,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 25.05582,
- "y_dimension": 18.00951,
- "z_dimension": 22.49789,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.1267,
+ "y_dimension": 12.39603,
+ "z_dimension": 29.84335,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3364,45 +3346,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-18D",
- "description": "22.50706 x 25.22804 x 19.29232 millimeter, 19.29232 millimeter",
+ "description": "12.24184 x 14.48993 x 30.28209 millimeter, 30.28209 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM263.GPWC.874",
"section_count": 0,
- "section_size": 19.29232,
+ "section_size": 30.28209,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D18",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D18",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D18_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D18_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D18",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D18",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 89.5205,
+ "x_translation": 66.10475,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 29.28213,
+ "y_translation": 44.30537,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 52.82544,
- "placement_date": "2024-08-07"
+ "z_translation": 37.62738,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.50706,
- "y_dimension": 25.22804,
- "z_dimension": 19.29232,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.24184,
+ "y_dimension": 14.48993,
+ "z_dimension": 30.28209,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3411,45 +3393,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-19A",
- "description": "15.90027 x 14.72151 x 18.71182 millimeter, 18.71182 millimeter",
+ "description": "12.97179 x 19.39253 x 20.38503 millimeter, 20.38503 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM846.JGXK.835",
"section_count": 0,
- "section_size": 18.71182,
+ "section_size": 20.38503,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A19",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A19",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A19_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A19_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A19",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A19",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 106.2138,
+ "x_translation": 69.80387,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 20.4318,
+ "y_translation": 49.70275,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 50.69169,
- "placement_date": "2024-08-07"
+ "z_translation": 51.97451,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.90027,
- "y_dimension": 14.72151,
- "z_dimension": 18.71182,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.97179,
+ "y_dimension": 19.39253,
+ "z_dimension": 20.38503,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3458,45 +3440,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-19B",
- "description": "16.18393 x 20.84466 x 14.78406 millimeter, 14.78406 millimeter",
+ "description": "9.123689 x 12.11808 x 20.50832 millimeter, 20.50832 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM764.MVCB.754",
"section_count": 0,
- "section_size": 14.78406,
+ "section_size": 20.50832,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B19",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B19",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B19_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B19_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B19",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B19",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 106.3556,
+ "x_translation": 63.31957,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.64167,
+ "y_translation": 57.60938,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 52.64261,
- "placement_date": "2024-08-07"
+ "z_translation": 52.03616,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 16.18393,
- "y_dimension": 20.84466,
- "z_dimension": 14.78406,
- "creation_date": "2024-08-07",
+ "x_dimension": 9.123689,
+ "y_dimension": 12.11808,
+ "z_dimension": 20.50832,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3505,45 +3487,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-19C",
- "description": "26.16352 x 18.97346 x 19.4164 millimeter, 19.4164 millimeter",
+ "description": "10.99419 x 12.24814 x 30.37533 millimeter, 30.37533 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM677.BDRD.667",
"section_count": 0,
- "section_size": 19.4164,
+ "section_size": 30.37533,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C19",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C19",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C19_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C19_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C19",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C19",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 96.925,
+ "x_translation": 63.26587,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.20542,
+ "y_translation": 57.5469,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 47.39764,
- "placement_date": "2024-08-07"
+ "z_translation": 34.97399,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 26.16352,
- "y_dimension": 18.97346,
- "z_dimension": 19.4164,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.99419,
+ "y_dimension": 12.24814,
+ "z_dimension": 30.37533,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3552,45 +3534,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-19D",
- "description": "22.85415 x 24.25668 x 16.21659 millimeter, 16.21659 millimeter",
+ "description": "11.92025 x 15.08176 x 29.90617 millimeter, 29.90617 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM386.SFSR.799",
"section_count": 0,
- "section_size": 16.21659,
+ "section_size": 29.90617,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D19",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D19",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D19_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D19_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D19",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D19",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 94.77005,
+ "x_translation": 69.27811,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 28.75052,
+ "y_translation": 46.14113,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 48.99754,
- "placement_date": "2024-08-07"
+ "z_translation": 32.68876,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 22.85415,
- "y_dimension": 24.25668,
- "z_dimension": 16.21659,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.92025,
+ "y_dimension": 15.08176,
+ "z_dimension": 29.90617,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3599,45 +3581,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-20A",
- "description": "15.40615 x 15.15731 x 17.64946 millimeter, 17.64946 millimeter",
+ "description": "12.51551 x 17.84052 x 22.54316 millimeter, 22.54316 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM439.JJRL.379",
"section_count": 0,
- "section_size": 17.64946,
+ "section_size": 22.54316,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A20",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A20",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A20_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A20_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A20",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A20",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 111.2964,
+ "x_translation": 72.94767,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 20.2139,
+ "y_translation": 52.50778,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 45.58875,
- "placement_date": "2024-08-07"
+ "z_translation": 46.02539,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.40615,
- "y_dimension": 15.15731,
- "z_dimension": 17.64946,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.51551,
+ "y_dimension": 17.84052,
+ "z_dimension": 22.54316,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3646,45 +3628,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-20B",
- "description": "17.35195 x 21.14282 x 15.35156 millimeter, 15.35156 millimeter",
+ "description": "10.50082 x 11.99744 x 22.54316 millimeter, 22.54316 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM932.PBSW.589",
"section_count": 0,
- "section_size": 15.35156,
+ "section_size": 22.54316,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B20",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B20",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B20_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B20_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B20",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B20",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 112.2693,
+ "x_translation": 67.79543,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.52731,
+ "y_translation": 59.68074,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 46.46162,
- "placement_date": "2024-08-07"
+ "z_translation": 46.02539,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 17.35195,
- "y_dimension": 21.14282,
- "z_dimension": 15.35156,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.50082,
+ "y_dimension": 11.99744,
+ "z_dimension": 22.54316,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3693,45 +3675,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-20C",
- "description": "27.24165 x 19.65039 x 14.63355 millimeter, 14.63355 millimeter",
+ "description": "11.91704 x 13.52859 x 30.42614 millimeter, 30.42614 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM798.NQQL.444",
"section_count": 0,
- "section_size": 14.63355,
+ "section_size": 30.42614,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C20",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C20",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C20_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C20_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C20",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C20",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 102.4366,
+ "x_translation": 66.08244,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.60033,
+ "y_translation": 58.8955,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 43.80751,
- "placement_date": "2024-08-07"
+ "z_translation": 28.58452,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 27.24165,
- "y_dimension": 19.65039,
- "z_dimension": 14.63355,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.91704,
+ "y_dimension": 13.52859,
+ "z_dimension": 30.42614,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3740,45 +3722,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "CLR-20D",
- "description": "23.91302 x 24.5086 x 14.84993 millimeter, 14.84993 millimeter",
+ "description": "10.63214 x 13.86189 x 29.61846 millimeter, 29.61846 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM934.XMWH.474",
"section_count": 0,
- "section_size": 14.84993,
+ "section_size": 29.61846,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D20",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D20",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D20_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D20_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D20",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D20",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 100.5245,
+ "x_translation": 72.00599,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 28.96939,
+ "y_translation": 48.03502,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 43.69932,
- "placement_date": "2024-08-07"
+ "z_translation": 27.77912,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 23.91302,
- "y_dimension": 24.5086,
- "z_dimension": 14.84993,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.63214,
+ "y_dimension": 13.86189,
+ "z_dimension": 29.61846,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3787,44 +3769,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-21A",
- "description": "14.63598 x 15.44485 x 16.69547 millimeter, 16.69547 millimeter",
+ "description": "11.73811 x 16.9427 x 25.57757 millimeter, 25.57757 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM523.LJDP.788",
"section_count": 0,
- "section_size": 16.69547,
+ "section_size": 25.57757,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A21",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A21",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A21_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A21_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A21",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A21",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 116.7707,
+ "x_translation": 76.02939,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 20.35767,
+ "y_translation": 53.82039,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 40.93396,
- "placement_date": "2024-08-07"
+ "z_translation": 39.88138,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.63598,
- "y_dimension": 15.44485,
- "z_dimension": 16.69547,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.73811,
+ "y_dimension": 16.9427,
+ "z_dimension": 25.57757,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3833,44 +3816,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-21B",
- "description": "18.03937 x 21.44382 x 14.62032 millimeter, 14.62032 millimeter",
+ "description": "12.73122 x 13.14281 x 25.57757 millimeter, 25.57757 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM298.ZGSD.633",
"section_count": 0,
- "section_size": 14.62032,
+ "section_size": 25.57757,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B21",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B21",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B21_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B21_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B21",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B21",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 118.4724,
+ "x_translation": 71.88988,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.37681,
+ "y_translation": 61.243,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 41.35632,
- "placement_date": "2024-08-07"
+ "z_translation": 39.88138,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 18.03937,
- "y_dimension": 21.44382,
- "z_dimension": 14.62032,
- "creation_date": "2024-08-07",
+ "x_dimension": 12.73122,
+ "y_dimension": 13.14281,
+ "z_dimension": 25.57757,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3879,45 +3863,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-21C",
- "description": "28.70508 x 19.58411 x 11.47199 millimeter, 11.47199 millimeter",
+ "description": "14.79606 x 14.42814 x 29.8874 millimeter, 29.8874 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM662.BVNR.532",
"section_count": 0,
- "section_size": 11.47199,
+ "section_size": 29.8874,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C21",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C21",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C21_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C21_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C21",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C21",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 107.9978,
+ "x_translation": 69.08891,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.56719,
+ "y_translation": 60.18898,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 39.86922,
- "placement_date": "2024-08-07"
+ "z_translation": 22.7876,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 28.70508,
- "y_dimension": 19.58411,
- "z_dimension": 11.47199,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.79606,
+ "y_dimension": 14.42814,
+ "z_dimension": 29.8874,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -3926,44 +3910,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PCMC-21D",
- "description": "25.97605 x 23.54746 x 13.45244 millimeter, 13.45244 millimeter",
+ "description": "9.704559 x 11.7148 x 29.79263 millimeter, 29.79263 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM529.MJXG.897",
"section_count": 0,
- "section_size": 13.45244,
+ "section_size": 29.79263,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D21",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D21",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D21_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D21_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D21",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D21",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 106.3953,
+ "x_translation": 75.01262,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 29.30852,
+ "y_translation": 49.10857,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 38.87899,
- "placement_date": "2024-08-07"
+ "z_translation": 22.74021,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 25.97605,
- "y_dimension": 23.54746,
- "z_dimension": 13.45244,
- "creation_date": "2024-08-07",
+ "x_dimension": 9.704559,
+ "y_dimension": 11.7148,
+ "z_dimension": 29.79263,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.obolibrary.org/obo/UBERON_0001151"
]
}
@@ -3973,44 +3956,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-22A",
- "description": "14.18982 x 16.80488 x 16.87128 millimeter, 16.87128 millimeter",
+ "description": "10.6069 x 18.09296 x 29.00265 millimeter, 29.00265 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM693.WRFR.798",
"section_count": 0,
- "section_size": 16.87128,
+ "section_size": 29.00265,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A22",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A22",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A22_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A22_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A22",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A22",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 122.8706,
+ "x_translation": 79.27498,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 21.29172,
+ "y_translation": 53.31833,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 36.8337,
- "placement_date": "2024-08-07"
+ "z_translation": 34.44456,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 14.18982,
- "y_dimension": 16.80488,
- "z_dimension": 16.87128,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.6069,
+ "y_dimension": 18.09296,
+ "z_dimension": 29.00265,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -4019,44 +4003,45 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-22B",
- "description": "18.33605 x 20.94514 x 13.71325 millimeter, 13.71325 millimeter",
+ "description": "14.87317 x 15.16013 x 29.00265 millimeter, 29.00265 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM652.JZJM.672",
"section_count": 0,
- "section_size": 13.71325,
+ "section_size": 29.00265,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B22",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B22",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B22_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B22_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B22",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B22",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 124.9437,
+ "x_translation": 75.53632,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.12748,
+ "y_translation": 61.40647,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 37.74832,
- "placement_date": "2024-08-07"
+ "z_translation": 34.44456,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 18.33605,
- "y_dimension": 20.94514,
- "z_dimension": 13.71325,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.87317,
+ "y_dimension": 15.16013,
+ "z_dimension": 29.00265,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001151"
+ "http://purl.obolibrary.org/obo/UBERON_0001151",
+ "http://purl.obolibrary.org/obo/UBERON_0001150"
]
}
},
@@ -4065,44 +4050,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-22C",
- "description": "31.02319 x 18.08291 x 10.11153 millimeter, 10.11153 millimeter",
+ "description": "18.89057 x 14.97997 x 28.9357 millimeter, 28.9357 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM986.ZTSL.433",
"section_count": 0,
- "section_size": 10.11153,
+ "section_size": 28.9357,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C22",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C22",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C22_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C22_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C22",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C22",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 114.1172,
+ "x_translation": 73.56503,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.12155,
+ "y_translation": 60.49434,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 35.94746,
- "placement_date": "2024-08-07"
+ "z_translation": 17.51455,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 31.02319,
- "y_dimension": 18.08291,
- "z_dimension": 10.11153,
- "creation_date": "2024-08-07",
+ "x_dimension": 18.89057,
+ "y_dimension": 14.97997,
+ "z_dimension": 28.9357,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.obolibrary.org/obo/UBERON_0001151"
]
}
@@ -4112,44 +4096,43 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FCMC-22D",
- "description": "28.74995 x 19.2867 x 13.5783 millimeter, 13.5783 millimeter",
+ "description": "11.98466 x 10.7503 x 26.58782 millimeter, 26.58782 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM834.CKNS.258",
"section_count": 0,
- "section_size": 13.5783,
+ "section_size": 26.58782,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D22",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D22",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D22_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D22_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D22",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D22",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 112.7718,
+ "x_translation": 79.96386,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 30.00428,
+ "y_translation": 49.29644,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 34.71507,
- "placement_date": "2024-08-07"
+ "z_translation": 16.88285,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 28.74995,
- "y_dimension": 19.2867,
- "z_dimension": 13.5783,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.98466,
+ "y_dimension": 10.7503,
+ "z_dimension": 26.58782,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
- "http://purl.obolibrary.org/obo/UBERON_0001150",
"http://purl.obolibrary.org/obo/UBERON_0001151"
]
}
@@ -4159,41 +4142,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-23A",
- "description": "15.04878 x 17.15679 x 19.11572 millimeter, 19.11572 millimeter",
+ "description": "10.60286 x 19.44019 x 29.22214 millimeter, 29.22214 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM785.PJSJ.638",
"section_count": 0,
- "section_size": 19.11572,
+ "section_size": 29.22214,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A23",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A23",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A23_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A23_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A23",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A23",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 131.7142,
+ "x_translation": 84.62077,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 25.05907,
+ "y_translation": 53.9196,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 31.39927,
- "placement_date": "2024-08-07"
+ "z_translation": 28.5935,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 15.04878,
- "y_dimension": 17.15679,
- "z_dimension": 19.11572,
- "creation_date": "2024-08-07",
+ "x_dimension": 10.60286,
+ "y_dimension": 19.44019,
+ "z_dimension": 29.22214,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4205,41 +4188,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-23B",
- "description": "20.10083 x 19.92172 x 14.15526 millimeter, 14.15526 millimeter",
+ "description": "17.12441 x 16.61472 x 29.30019 millimeter, 29.30019 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM967.LFWL.562",
"section_count": 0,
- "section_size": 14.15526,
+ "section_size": 29.30019,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B23",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B23",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B23_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B23_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B23",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B23",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 134.2402,
+ "x_translation": 80.47494,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 31.47052,
+ "y_translation": 62.13377,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 33.52868,
- "placement_date": "2024-08-07"
+ "z_translation": 28.63253,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 20.10083,
- "y_dimension": 19.92172,
- "z_dimension": 14.15526,
- "creation_date": "2024-08-07",
+ "x_dimension": 17.12441,
+ "y_dimension": 16.61472,
+ "z_dimension": 29.30019,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4251,41 +4234,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-23C",
- "description": "34.98645 x 14.72991 x 11.42032 millimeter, 11.42032 millimeter",
+ "description": "22.67708 x 15.25796 x 25.09426 millimeter, 25.09426 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM657.KJJZ.262",
"section_count": 0,
- "section_size": 11.42032,
+ "section_size": 25.09426,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C23",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C23",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C23_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C23_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C23",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C23",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 122.5759,
+ "x_translation": 80.23233,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 37.05911,
+ "y_translation": 60.66236,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 31.71553,
- "placement_date": "2024-08-07"
+ "z_translation": 13.17107,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 34.98645,
- "y_dimension": 14.72991,
- "z_dimension": 11.42032,
- "creation_date": "2024-08-07",
+ "x_dimension": 22.67708,
+ "y_dimension": 15.25796,
+ "z_dimension": 25.09426,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4297,41 +4280,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "FF-23D",
- "description": "32.2529 x 14.14364 x 16.78451 millimeter, 16.78451 millimeter",
+ "description": "14.65074 x 10.70868 x 21.27949 millimeter, 21.27949 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM586.FJPR.395",
"section_count": 0,
- "section_size": 16.78451,
+ "section_size": 21.27949,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D23",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D23",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D23_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D23_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D23",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D23",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 121.1116,
+ "x_translation": 86.64471,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 32.85459,
+ "y_translation": 49.27563,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 29.4075,
- "placement_date": "2024-08-07"
+ "z_translation": 12.35376,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 32.2529,
- "y_dimension": 14.14364,
- "z_dimension": 16.78451,
- "creation_date": "2024-08-07",
+ "x_dimension": 14.65074,
+ "y_dimension": 10.70868,
+ "z_dimension": 21.27949,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4343,41 +4326,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-24A",
- "description": "18.01792 x 19.08403 x 23.73711 millimeter, 23.73711 millimeter",
+ "description": "11.02691 x 21.37993 x 27.73987 millimeter, 27.73987 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM234.CXDK.624",
"section_count": 0,
- "section_size": 23.73711,
+ "section_size": 27.73987,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A24",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A24",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A24_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A24_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#A24",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#A24",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 145.755,
+ "x_translation": 93.15575,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 30.53609,
+ "y_translation": 55.65164,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 23.90415,
- "placement_date": "2024-08-07"
+ "z_translation": 23.1559,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 18.01792,
- "y_dimension": 19.08403,
- "z_dimension": 23.73711,
- "creation_date": "2024-08-07",
+ "x_dimension": 11.02691,
+ "y_dimension": 21.37993,
+ "z_dimension": 27.73987,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4389,41 +4372,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-24B",
- "description": "21.50425 x 21.90219 x 20.06283 millimeter, 20.06283 millimeter",
+ "description": "19.66953 x 17.46471 x 27.73987 millimeter, 27.73987 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM556.LCHZ.242",
"section_count": 0,
- "section_size": 20.06283,
+ "section_size": 27.73987,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B24",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B24",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B24_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B24_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#B24",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#B24",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 147.4981,
+ "x_translation": 88.83444,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 34.53823,
+ "y_translation": 63.36233,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 25.74129,
- "placement_date": "2024-08-07"
+ "z_translation": 23.1559,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 21.50425,
- "y_dimension": 21.90219,
- "z_dimension": 20.06283,
- "creation_date": "2024-08-07",
+ "x_dimension": 19.66953,
+ "y_dimension": 17.46471,
+ "z_dimension": 27.73987,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4435,41 +4418,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-24C",
- "description": "38.62301 x 14.8407 x 14.50089 millimeter, 14.50089 millimeter",
+ "description": "24.00766 x 15.51409 x 18.36121 millimeter, 18.36121 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM779.QWGV.396",
"section_count": 0,
- "section_size": 14.50089,
+ "section_size": 18.36121,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C24",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C24",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C24_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C24_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#C24",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#C24",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 135.1734,
+ "x_translation": 89.49216,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 41.05781,
+ "y_translation": 61.55121,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 22.06671,
- "placement_date": "2024-08-07"
+ "z_translation": 9.241147,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 38.62301,
- "y_dimension": 14.8407,
- "z_dimension": 14.50089,
- "creation_date": "2024-08-07",
+ "x_dimension": 24.00766,
+ "y_dimension": 15.51409,
+ "z_dimension": 18.36121,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4481,41 +4464,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "RNA-24D",
- "description": "37.42025 x 13.19872 x 19.1533 millimeter, 19.1533 millimeter",
+ "description": "15.66815 x 13.71033 x 16.91988 millimeter, 16.91988 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM733.MVMH.924",
"section_count": 0,
- "section_size": 19.1533,
+ "section_size": 16.91988,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D24",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D24",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D24_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D24_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#D24",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#D24",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 134.572,
+ "x_translation": 95.47637,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 38.93799,
+ "y_translation": 51.69784,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 19.74051,
- "placement_date": "2024-08-07"
+ "z_translation": 10.02035,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 37.42025,
- "y_dimension": 13.19872,
- "z_dimension": 19.1533,
- "creation_date": "2024-08-07",
+ "x_dimension": 15.66815,
+ "y_dimension": 13.71033,
+ "z_dimension": 16.91988,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"
@@ -4527,41 +4510,41 @@
"@type": "Sample",
"sample_type": "Tissue Block",
"label": "PE-25",
- "description": "37.81435 x 22.67769 x 26.06753 millimeter, 26.06753 millimeter",
+ "description": "20.76241 x 22.00262 x 26.83708 millimeter, 26.83708 millimeter",
"link": "https://portal.hubmapconsortium.org/browse/HBM324.XBHH.364",
"section_count": 0,
- "section_size": 26.06753,
+ "section_size": 26.83708,
"rui_location": {
"@context": "https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld",
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#25",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#25",
"placement": {
- "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-female#25_placement",
+ "@id": "https://purl.humanatlas.io/millitome/generic-pancreas-male#25_placement",
"@type": "SpatialPlacement",
- "source": "https://purl.humanatlas.io/millitome/generic-pancreas-female#25",
- "target": "http://purl.org/ccf/latest/ccf.owl#VHFPancreas",
+ "source": "https://purl.humanatlas.io/millitome/generic-pancreas-male#25",
+ "target": "http://purl.org/ccf/latest/ccf.owl#VHMPancreas",
"rotation_order": "XYZ",
"rotation_units": "degree",
"scaling_units": "ratio",
"translation_units": "millimeter",
"x_rotation": 0,
"x_scaling": 1,
- "x_translation": 152.2096,
+ "x_translation": 100.233,
"y_rotation": 0,
"y_scaling": 1,
- "y_translation": 39.43519,
+ "y_translation": 60.58373,
"z_rotation": 0,
"z_scaling": 1,
- "z_translation": 13.07304,
- "placement_date": "2024-08-07"
+ "z_translation": 13.46214,
+ "placement_date": "2024-08-15"
},
"@type": "SpatialEntity",
"creator_first_name": "Bhargav Snehal",
"creator_last_name": "Desai",
"dimension_units": "millimeter",
- "x_dimension": 37.81435,
- "y_dimension": 22.67769,
- "z_dimension": 26.06753,
- "creation_date": "2024-08-07",
+ "x_dimension": 20.76241,
+ "y_dimension": 22.00262,
+ "z_dimension": 26.83708,
+ "creation_date": "2024-08-15",
"creator": "Bhargav Snehal Desai",
"ccf_annotations": [
"http://purl.obolibrary.org/obo/UBERON_0001151"