moose-dev=2024.12.02 installation errors misc/hit_cli.*

[arndflatten]

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Question

I followed the description for a clean new conda installation of moose, but got 12 errors upon ./run_tests referring to misc.hit_cli.-tests.
Is it possible, that there is a missing dependency in moose-dev=2024.12.02=mpich. I tried updating my conda env with an additional moose-pyhit, but the errors remain.

Do you have any other suggestion?

misc/hit_cli.find/parameter_exists ............................................................................................................ FAILED (CODE 1)
misc/hit_cli.find/parameter_does_not_exist .................................................................................................... FAILED (CODE 1)
misc/hit_cli.find/positive_pattern ............................................................................................................ FAILED (CODE 1)
misc/hit_cli.find/negative_pattern ............................................................................................................ FAILED (CODE 1)
misc/hit_cli.find/additional_pattern .......................................................................................................... FAILED (CODE 1)
misc/hit_cli.find/additional_pattern_negative ................................................................................................. FAILED (CODE 1)
misc/hit_cli.merge ............................................................................................................................ FAILED (CODE 1)
misc/hit_cli.diff/vanilla ..................................................................................................................... FAILED (CODE 1)
misc/hit_cli.diff/color ....................................................................................................................... FAILED (CODE 1)
misc/hit_cli.diff/verbose ..................................................................................................................... FAILED (CODE 1)
misc/hit_cli.diff/verbose_color ............................................................................................................... FAILED (CODE 1)
misc/hit_cli.diff/common ...................................................................................................................... FAILED (CODE 1)
---------------------------------------------------------------------------------------------------------------------------------------------------------------
Ran 4586 tests in 107.9 seconds. Average test time 0.5 seconds, maximum test time 83.4 seconds.
4574 passed, 106 skipped, 12 FAILED

I could upload the full verbose output of run_tests, if required, but maybe you already have an idea what might be missing? Thanks.

[GiudGiud]

Hello

The full verbose output of the test failures, specifically one of these tests will help us diagnose the issue.

Guillaume

[milljm]

The latest standalone moose-pyhit package is also broken. This package is not necessary except for special-use cases.

[arndflatten]

Here are the details for one of these tests (sorry for posting the colors as binaries, i just wrote the outcome of run_tests to a file and copied from there):

�[31mmisc/hit_cli.find/parameter_exists: �[0mWorking Directory: /home/moose/moose_beh/moose/test/tests/misc/hit_cli
�[31mmisc/hit_cli.find/parameter_exists: �[0mRunning command: ./hit_wrapper.py gold/parameter_exists find Kernels/\*/variable input1.i input2.i
�[31mmisc/hit_cli.find/parameter_exists: �[0m
�[31mmisc/hit_cli.find/parameter_exists: �[0m################################################################################
�[31mmisc/hit_cli.find/parameter_exists: �[0mBegin runner_run output
�[31mmisc/hit_cli.find/parameter_exists: �[0m
�[31mmisc/hit_cli.find/parameter_exists: �[0mRunning:  /home/moose/moose_beh/moose/framework/contrib/hit/hit find Kernels/*/variable input1.i input2.i
�[31mmisc/hit_cli.find/parameter_exists: �[0mhit returned  127
�[31mmisc/hit_cli.find/parameter_exists: �[0mOutput:
�[31mmisc/hit_cli.find/parameter_exists: �[0m b'' 
�[31mmisc/hit_cli.find/parameter_exists: �[0mdoes not match gold:
�[31mmisc/hit_cli.find/parameter_exists: �[0m b'input1.i:9 Kernels/diff_u/variable = u\ninput1.i:13 Kernels/diff_v/variable = v\n2 matches found.\n'
�[31mmisc/hit_cli.find/parameter_exists: �[0m3.11.8 | packaged by conda-forge | (main, Feb 16 2024, 20:53:32) [GCC 12.3.0]
�[31mmisc/hit_cli.find/parameter_exists: �[0m/home/moose/moose_beh/moose/framework/contrib/hit/hit: error while loading shared libraries: libwaspcore.so.04: cannot open shared object file: No such file or directory
�[31mmisc/hit_cli.find/parameter_exists: �[0m
�[31mmisc/hit_cli.find/parameter_exists: �[0m################################################################################
�[31mmisc/hit_cli.find/parameter_exists: �[0mEnd runner_run output
�[31mmisc/hit_cli.find/parameter_exists: �[0m
�[31mmisc/hit_cli.find/parameter_exists: �[0m################################################################################
�[31mmisc/hit_cli.find/parameter_exists: �[0mBegin tester output
�[31mmisc/hit_cli.find/parameter_exists: �[0m
�[31mmisc/hit_cli.find/parameter_exists: �[0mTester failed, reason: CODE 1
�[31mmisc/hit_cli.find/parameter_exists: �[0m
�[31mmisc/hit_cli.find/parameter_exists: �[0m################################################################################
�[31mmisc/hit_cli.find/parameter_exists: �[0mEnd tester output
�[31mmisc/hit_cli.find/parameter_exists: �[0m
misc/hit_cli.find/parameter_exists �[90m...........................................................�[0m �[31mFAILED (CODE 1)�[0m

Apparently, because of the note on missing libwasp*.so libraray I came accross this post, with the important hint to

cd moose/framework/
git clean -xfdq

which finally let the tests pass successfully with the next execution of make -j$(nproc); ./run_tests -j$(nproc).

Somehow, I did remember to make clobberall, but not to git clean -xfdq. Still not sure, when and how often to use the latter (maybe you can comment on this ?!), but obviously I should remember this command, if something doesn't pass the tests.

[milljm]

�[31mmisc/hit_cli.find/parameter_exists: �[0m/home/moose/moose_beh/moose/framework/contrib/hit/hit: error while loading shared libraries: libwaspcore.so.04: cannot open shared object file: No such file or directory

Yeah this is the error I get when using moose-pyhit (latest version).

Somehow, I did remember to make clobberall, but not to git clean -xfdq. Still not sure, when and how often to use the latter

You and me both 😆, I always stick to git commands. I trust git to clean a repo more than what we may have programmed into a Makefile. I also believe using git is quicker. My favorite two command to do so:

# cd ~/projects/moose
git clean -xfd
git submodule foreach --recursive git clean -xfd