Update urlPatterns for Ontology through OLS to OLS4

[matthiaskoenig]

The OLS3 will stop working at the end of the month and currently has a lot of issues (https://www.ebi.ac.uk/ols). E.g. the webpage is down for the last few days, and maintenance will stop in a few days.
The urlPatterns should be switched to the new OLS4 https://www.ebi.ac.uk/ols4

I.e. things such as

"urlPattern": "https://www.ebi.ac.uk/ols/ontologies/teddy/terms?short_form={$id}",

should now be

"urlPattern": "https://www.ebi.ac.uk/ols4/ontologies/teddy/terms?short_form={$id}",

Same for home URL: https://www.ebi.ac.uk/ols/ontologies/teddy -> https://www.ebi.ac.uk/ols4/ontologies/teddy
This affects all OLS resources.

[matthiaskoenig]

This affects only a handful of urls, many already have been updated. See screenshot attached:

I.e. bao, teddy, obi, edam, vario, mamo, eo, ordo, probonto, nmrcv

[renatocjn]

Hi,
I have a GH issue with the OLS 4 team and I will be updating the remaining URLs soon. Here is the issue: EBISPOT/ols4#388

Could you provide the location where you saw that OLS 3 will be offline by the end of the month?

[matthiaskoenig]

Not be offline, but no longer maintained. But from the outage the last days it can be assumed this won't work well in the future. I assume/hope they shut it down and redirect to OLS4. Information was on the OLS3 page which was not reachable yesterday.

…

On Mon, Oct 9, 2023, 10:35 Renato Caminha Juacaba Neto < ***@***.***> wrote: Hi, I have a GH issue with the OLS 4 team and I will be updating the remaining URLs soon. Here is the issue: EBISPOT/ols4#388 <EBISPOT/ols4#388> Could you provide the location where you saw that OLS 3 will be offline by the end of the month? — Reply to this email directly, view it on GitHub <#231 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAG33OVDIQHIEKXYBNKMAU3X6OZLTAVCNFSM6AAAAAA5XVSAK2VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTONJSGU3DCNZRHA> . You are receiving this because you authored the thread.Message ID: ***@***.*** com>

[renatocjn]

These were updated a while ago, I forgot to close this issue. Please reopen if any URL pattern still uses OLS