Add unified-domain to solve porous flow #9021

Workflow file for this run

	name: CI

	on:
	pull_request:
	push:
	branches: main
	schedule:
	- cron: '5 0 * * *'

	# Cancel in progress CI runs when a new run targeting the same PR or branch/tag is triggered.
	# https://stackoverflow.com/questions/66335225/how-to-cancel-previous-runs-in-the-pr-when-you-push-new-commitsupdate-the-curre
	concurrency:
	group: ${{ github.workflow }}-${{ github.event.pull_request.number \|\| github.ref }}
	cancel-in-progress: true

	jobs:
	flake8:
	name: Flake8
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	-
	uses: actions/setup-python@v5
	with:
	# matches compat target in setup.py
	python-version: '3.8'
	- name: Flake8 test
	run: \|
	python3 -m venv myenv
	source myenv/bin/activate
	python -m pip install wheel
	python -m pip install flake8 pep8-naming flake8-quotes flake8-bugbear
	python -m flake8 --show-source --statistics "$(basename $GITHUB_REPOSITORY)" test examples setup.py doc/conf.py bin/ && echo "Flake8 found no errors."

	mypy:
	name: Mypy
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	-
	uses: actions/setup-python@v5
	with:
	python-version: '3.x'
	- name: Install
	run: \|
	. .ci-support/install.sh
	- name: Run mypy
	run: \|
	MINIFORGE_INSTALL_DIR=.miniforge3
	. "$MINIFORGE_INSTALL_DIR/bin/activate" testing
	python -m pip install types-psutil types-PyYAML
	./run-mypy.sh

	pylint:
	name: Pylint
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	-
	uses: actions/setup-python@v5
	with:
	python-version: '3.x'
	- name: Install
	run: \|
	. .ci-support/install.sh

	- name: Run Pylint
	run: \|
	MINIFORGE_INSTALL_DIR=.miniforge3
	. "$MINIFORGE_INSTALL_DIR/bin/activate" testing
	./run-pylint.sh

	pydocstyle:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	-
	uses: actions/setup-python@v5
	with:
	python-version: '3.x'
	- name: Run Pydocstyle
	run: \|
	python3 -m venv myenv
	source myenv/bin/activate
	python -m pip install wheel
	python -m pip install pydocstyle
	python -m pydocstyle "$(basename $GITHUB_REPOSITORY)" && echo "pydocstyle found no errors."

	pytest:
	name: Pytest
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4
	- name: Install
	run: \|
	. .ci-support/install.sh

	- name: Run tests
	run: \|
	MINIFORGE_INSTALL_DIR=.miniforge3
	. "$MINIFORGE_INSTALL_DIR/bin/activate" testing
	cd test
	python -m pip install pytest
	python -m pytest --cov=mirgecom --durations=0 --tb=native --junitxml=pytest.xml --doctest-modules -rxsw . ../doc/.rst ../doc//*.rst

	examples:
	name: Examples
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest, porter]

	steps:
	- uses: actions/checkout@v4
	- name: Install
	run: \|
	. .ci-support/install.sh

	- name: Run examples
	run: \|
	set -x
	MINIFORGE_INSTALL_DIR=.miniforge3
	. "$MINIFORGE_INSTALL_DIR/bin/activate" testing
	export XDG_CACHE_HOME=/tmp
	mamba install vtk # needed for the accuracy comparison

	# Temporary workaround for https://github.com/conda-forge/openvino-feedstock/pull/73

	[[ $(hostname) == "porter" ]] && export PYOPENCL_TEST="port:nv" && unset XDG_CACHE_HOME

	# This is only possible because actions run sequentially on porter
	[[ $(hostname) == "porter" ]] && rm -rf /tmp/githubrunner/pocl-scratch && rm -rf /tmp/githubrunner/xdg-scratch

	scripts/run-integrated-tests.sh --examples

	doc:
	name: Documentation
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4
	- name: Install
	run: \|
	. .ci-support/install.sh

	- name: Build docs
	run: \|
	set -x
	MINIFORGE_INSTALL_DIR=.miniforge3
	. "$MINIFORGE_INSTALL_DIR/bin/activate" testing

	sudo apt-get update
	sudo apt-get install texlive-latex-extra latexmk

	mamba install sphinx graphviz 'docutils>=0.16'

	# Work around "Not enough memory to run on this device." errors in CI:
	mamba uninstall pocl

	pip install sphinx-math-dollar sphinx-copybutton furo
	cd doc
	make html SPHINXOPTS="-W --keep-going -n"
	make latexpdf SPHINXOPTS="-W --keep-going -n"

	emirge:
	name: Emirge installation
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest, macos-latest]

	steps:
	- uses: actions/checkout@v4
	- name: Install emirge
	run: \|
	[[ $(uname) == Linux ]] && sudo apt-get update && sudo apt-get install -y openmpi-bin libopenmpi-dev
	[[ $(uname) == Darwin ]] && ( brew upgrade \|\| true; brew install mpich )
	cd ..
	git clone https://github.com/illinois-ceesd/emirge
	cd emirge
	cp -a ../mirgecom .
	./install.sh --skip-clone

	- name: Run simple mirgecom test
	run: \|
	cd ..
	source emirge/config/activate_env.sh
	cd mirgecom/examples
	python -m mpi4py ./pulse.py

	production:
	name: Production testing
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest, macos-latest, porter]

	steps:
	- uses: actions/checkout@v4
	with:
	fetch-depth: '0'
	- name: Prepare production environment
	run: \|
	set -x
	[[ $(uname) == Linux ]] && [[ $(hostname) != "porter" ]] && sudo apt-get update && sudo apt-get install -y openmpi-bin libopenmpi-dev
	[[ $(uname) == Darwin ]] && ( brew upgrade \|\| true; brew install mpich )

	# This is only possible because actions run sequentially on porter
	[[ $(hostname) == "porter" ]] && rm -rf /tmp/githubrunner/pocl-scratch && rm -rf /tmp/githubrunner/xdg-scratch

	MIRGEDIR=$(pwd)
	cat scripts/production-testing-env.sh
	. scripts/production-testing-env.sh
	cd ..
	date
	printf "Removing stale install ..."
	rm -rf emirge.prod emirge.y1
	printf "done.\n"
	date
	git clone https://github.com/illinois-ceesd/emirge emirge.prod
	cd emirge.prod
	. ../mirgecom/scripts/install-mirge-from-source.sh ${MIRGEDIR}/..

	- name: Run production test
	run: \|
	source ../config/activate_env.sh

	# Temporary workaround for https://github.com/conda-forge/openvino-feedstock/pull/73

	scripts/run-integrated-tests.sh --production

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Add unified-domain to solve porous flow #9021

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Add unified-domain to solve porous flow #9021

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Workflow file for this run