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Gemfile.lock
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GIT
remote: https://github.com/ncbo/ncbo_ontology_recommender.git
revision: 9dbd4f179e42c52095129d353a5ac584e9bd47f3
branch: master
specs:
ncbo_ontology_recommender (0.0.1)
goo
ncbo_annotator
ontologies_linked_data
redis
GIT
remote: https://github.com/ontoportal-lirmm/goo.git
revision: f8ac7b00e8d8b46d1eea04de014175525c1cdd83
branch: development
specs:
goo (0.0.2)
addressable (~> 2.8)
pry
rdf (= 3.2.11)
rdf-raptor
rdf-rdfxml
rdf-vocab
redis
rest-client
rsolr
sparql-client
uuid
GIT
remote: https://github.com/ontoportal-lirmm/ncbo_annotator.git
revision: 1eb751b65d10ae23d45c74e0516c78754a8419f0
branch: development
specs:
ncbo_annotator (0.0.1)
goo
ontologies_linked_data
redis
ruby-xxHash
GIT
remote: https://github.com/ontoportal-lirmm/ncbo_cron.git
revision: bed0ff08408ad1241db3513992ad025a253eeef0
branch: master
specs:
ncbo_cron (0.0.1)
dante
goo
google-analytics-data
google-apis-analytics_v3
mlanett-redis-lock
multi_json
ncbo_annotator
ontologies_linked_data
redis
rufus-scheduler (~> 2.0.24)
GIT
remote: https://github.com/ontoportal-lirmm/ontologies_linked_data.git
revision: 312ef426eeaa461e88fa23124ea5fd531f4276ba
branch: development
specs:
ontologies_linked_data (0.0.1)
activesupport
bcrypt
goo
json
libxml-ruby
multi_json
oj
omni_logger
pony
rack
rack-test
rsolr
rubyzip
GIT
remote: https://github.com/ontoportal-lirmm/sparql-client.git
revision: 59251e59346c9a69a67c88552ba55a1244eec602
branch: development
specs:
sparql-client (3.2.2)
net-http-persistent (~> 4.0, >= 4.0.2)
rdf (~> 3.2, >= 3.2.11)
GIT
remote: https://github.com/palexander/rack-post-body-to-params.git
revision: 0fd30e710386d0cb8a3a6833d9549d7b655d5398
branch: multipart_support
specs:
rack-post-body-to-params (0.1.8)
activesupport (>= 2.3)
GIT
remote: https://github.com/palexander/shotgun.git
revision: db198224aaab2e4cb9b049adccb30e387d88bc3b
branch: ncbo
specs:
shotgun (0.9)
rack (>= 1.0)
GEM
remote: https://rubygems.org/
specs:
activesupport (5.2.8.1)
concurrent-ruby (~> 1.0, >= 1.0.2)
i18n (>= 0.7, < 2)
minitest (~> 5.1)
tzinfo (~> 1.1)
addressable (2.8.7)
public_suffix (>= 2.0.2, < 7.0)
airbrussh (1.5.3)
sshkit (>= 1.6.1, != 1.7.0)
ast (2.4.2)
backports (3.25.0)
base64 (0.2.0)
bcrypt (3.1.20)
bcrypt_pbkdf (1.1.1)
bigdecimal (3.1.8)
builder (3.3.0)
capistrano (3.19.1)
airbrussh (>= 1.0.0)
i18n
rake (>= 10.0.0)
sshkit (>= 1.9.0)
capistrano-bundler (2.1.1)
capistrano (~> 3.1)
capistrano-locally (0.3.0)
capistrano (~> 3.0)
capistrano-rbenv (2.2.0)
capistrano (~> 3.1)
sshkit (~> 1.3)
coderay (1.1.3)
concurrent-ruby (1.3.4)
connection_pool (2.4.1)
crack (0.4.5)
rexml
cube-ruby (0.0.3)
dante (0.2.0)
date (3.3.4)
declarative (0.0.20)
docile (1.4.1)
domain_name (0.6.20240107)
ed25519 (1.3.0)
faraday (2.8.1)
base64
faraday-net_http (>= 2.0, < 3.1)
ruby2_keywords (>= 0.0.4)
faraday-net_http (3.0.2)
faraday-retry (2.2.1)
faraday (~> 2.0)
ffi (1.16.3)
gapic-common (0.21.1)
faraday (>= 1.9, < 3.a)
faraday-retry (>= 1.0, < 3.a)
google-protobuf (~> 3.18)
googleapis-common-protos (>= 1.4.0, < 2.a)
googleapis-common-protos-types (>= 1.11.0, < 2.a)
googleauth (~> 1.9)
grpc (~> 1.59)
get_process_mem (0.2.7)
ffi (~> 1.0)
google-analytics-data (0.6.1)
google-analytics-data-v1beta (>= 0.11, < 2.a)
google-cloud-core (~> 1.6)
google-analytics-data-v1beta (0.13.1)
gapic-common (>= 0.21.1, < 2.a)
google-cloud-errors (~> 1.0)
google-apis-analytics_v3 (0.16.0)
google-apis-core (>= 0.15.0, < 2.a)
google-apis-core (0.15.1)
addressable (~> 2.5, >= 2.5.1)
googleauth (~> 1.9)
httpclient (>= 2.8.3, < 3.a)
mini_mime (~> 1.0)
mutex_m
representable (~> 3.0)
retriable (>= 2.0, < 4.a)
google-cloud-core (1.7.1)
google-cloud-env (>= 1.0, < 3.a)
google-cloud-errors (~> 1.0)
google-cloud-env (2.1.1)
faraday (>= 1.0, < 3.a)
google-cloud-errors (1.4.0)
google-protobuf (3.25.3-x86_64-linux)
googleapis-common-protos (1.6.0)
google-protobuf (>= 3.18, < 5.a)
googleapis-common-protos-types (~> 1.7)
grpc (~> 1.41)
googleapis-common-protos-types (1.16.0)
google-protobuf (>= 3.18, < 5.a)
googleauth (1.11.2)
faraday (>= 1.0, < 3.a)
google-cloud-env (~> 2.1)
jwt (>= 1.4, < 3.0)
multi_json (~> 1.11)
os (>= 0.9, < 2.0)
signet (>= 0.16, < 2.a)
grpc (1.65.2-x86_64-linux)
google-protobuf (>= 3.25, < 5.0)
googleapis-common-protos-types (~> 1.0)
haml (5.2.2)
temple (>= 0.8.0)
tilt
hashdiff (1.1.1)
htmlentities (4.3.4)
http-accept (1.7.0)
http-cookie (1.0.7)
domain_name (~> 0.5)
httpclient (2.8.3)
i18n (1.14.6)
concurrent-ruby (~> 1.0)
json (2.7.5)
json-ld (3.0.2)
multi_json (~> 1.12)
rdf (>= 2.2.8, < 4.0)
json-schema (2.8.1)
addressable (>= 2.4)
jwt (2.9.3)
base64
kgio (2.11.4)
language_server-protocol (3.17.0.3)
libxml-ruby (5.0.3)
link_header (0.0.8)
logger (1.6.1)
macaddr (1.7.2)
systemu (~> 2.6.5)
mail (2.8.1)
mini_mime (>= 0.1.1)
net-imap
net-pop
net-smtp
method_source (1.1.0)
mime-types (3.6.0)
logger
mime-types-data (~> 3.2015)
mime-types-data (3.2024.1001)
mini_mime (1.1.5)
minitest (5.25.1)
minitest-hooks (1.5.2)
minitest (> 5.3)
minitest-stub_any_instance (1.0.3)
mlanett-redis-lock (0.2.7)
redis
multi_json (1.15.0)
mutex_m (0.2.0)
net-http-persistent (4.0.4)
connection_pool (~> 2.2)
net-imap (0.4.17)
date
net-protocol
net-pop (0.1.2)
net-protocol
net-protocol (0.2.2)
timeout
net-scp (4.0.0)
net-ssh (>= 2.6.5, < 8.0.0)
net-sftp (4.0.0)
net-ssh (>= 5.0.0, < 8.0.0)
net-smtp (0.5.0)
net-protocol
net-ssh (7.3.0)
netrc (0.11.0)
newrelic_rpm (9.14.0)
oj (3.16.6)
bigdecimal (>= 3.0)
ostruct (>= 0.2)
omni_logger (0.1.4)
logger
os (1.1.4)
ostruct (0.6.0)
parallel (1.26.3)
parseconfig (1.1.2)
parser (3.3.5.0)
ast (~> 2.4.1)
racc
pony (1.13.1)
mail (>= 2.0)
pry (0.14.2)
coderay (~> 1.1)
method_source (~> 1.0)
public_suffix (5.1.1)
racc (1.8.1)
rack (1.6.13)
rack-accept (0.4.5)
rack (>= 0.4)
rack-attack (6.6.1)
rack (>= 1.0, < 3)
rack-cache (1.13.0)
rack (>= 0.4)
rack-cors (1.0.6)
rack (>= 1.6.0)
rack-mini-profiler (3.3.1)
rack (>= 1.2.0)
rack-protection (1.5.5)
rack
rack-test (2.1.0)
rack (>= 1.3)
rack-timeout (0.7.0)
rainbow (3.1.1)
raindrops (0.20.1)
rake (10.5.0)
rdf (3.2.11)
link_header (~> 0.0, >= 0.0.8)
rdf-raptor (3.2.0)
ffi (~> 1.15)
rdf (~> 3.2)
rdf-rdfxml (3.2.2)
builder (~> 3.2)
htmlentities (~> 4.3)
rdf (~> 3.2)
rdf-xsd (~> 3.2)
rdf-vocab (3.2.7)
rdf (~> 3.2, >= 3.2.4)
rdf-xsd (3.2.1)
rdf (~> 3.2)
rexml (~> 3.2)
redcarpet (3.6.0)
redis (5.3.0)
redis-client (>= 0.22.0)
redis-client (0.22.2)
connection_pool
redis-rack-cache (2.2.1)
rack-cache (>= 1.10, < 2)
redis-store (>= 1.6, < 2)
redis-store (1.11.0)
redis (>= 4, < 6)
regexp_parser (2.9.2)
representable (3.2.0)
declarative (< 0.1.0)
trailblazer-option (>= 0.1.1, < 0.2.0)
uber (< 0.2.0)
request_store (1.7.0)
rack (>= 1.4)
rest-client (2.1.0)
http-accept (>= 1.7.0, < 2.0)
http-cookie (>= 1.0.2, < 2.0)
mime-types (>= 1.16, < 4.0)
netrc (~> 0.8)
retriable (3.1.2)
rexml (3.3.9)
rsolr (2.6.0)
builder (>= 2.1.2)
faraday (>= 0.9, < 3, != 2.0.0)
rubocop (1.67.0)
json (~> 2.3)
language_server-protocol (>= 3.17.0)
parallel (~> 1.10)
parser (>= 3.3.0.2)
rainbow (>= 2.2.2, < 4.0)
regexp_parser (>= 2.4, < 3.0)
rubocop-ast (>= 1.32.2, < 2.0)
ruby-progressbar (~> 1.7)
unicode-display_width (>= 2.4.0, < 3.0)
rubocop-ast (1.33.0)
parser (>= 3.3.1.0)
ruby-progressbar (1.13.0)
ruby-xxHash (0.4.0.2)
ruby2_keywords (0.0.5)
rubyzip (2.3.2)
rufus-scheduler (2.0.24)
tzinfo (>= 0.3.22)
signet (0.19.0)
addressable (~> 2.8)
faraday (>= 0.17.5, < 3.a)
jwt (>= 1.5, < 3.0)
multi_json (~> 1.10)
simplecov (0.22.0)
docile (~> 1.1)
simplecov-html (~> 0.11)
simplecov_json_formatter (~> 0.1)
simplecov-cobertura (2.1.0)
rexml
simplecov (~> 0.19)
simplecov-html (0.13.1)
simplecov_json_formatter (0.1.4)
sinatra (1.4.8)
rack (~> 1.5)
rack-protection (~> 1.4)
tilt (>= 1.3, < 3)
sinatra-advanced-routes (0.5.3)
sinatra (~> 1.0)
sinatra-contrib (1.4.7)
backports (>= 2.0)
multi_json
rack-protection
rack-test
sinatra (~> 1.4.0)
tilt (>= 1.3, < 3)
sshkit (1.23.2)
base64
net-scp (>= 1.1.2)
net-sftp (>= 2.1.2)
net-ssh (>= 2.8.0)
ostruct
systemu (2.6.5)
temple (0.10.3)
thread_safe (0.3.6)
tilt (2.4.0)
timeout (0.4.1)
trailblazer-option (0.1.2)
tzinfo (1.2.11)
thread_safe (~> 0.1)
uber (0.1.0)
unicode-display_width (2.6.0)
unicorn (6.1.0)
kgio (~> 2.6)
raindrops (~> 0.7)
unicorn-worker-killer (0.4.5)
get_process_mem (~> 0)
unicorn (>= 4, < 7)
uuid (2.3.9)
macaddr (~> 1.0)
webmock (3.19.1)
addressable (>= 2.8.0)
crack (>= 0.3.2)
hashdiff (>= 0.4.0, < 2.0.0)
webrick (1.8.2)
PLATFORMS
x86_64-linux
DEPENDENCIES
activesupport (~> 5)
bcrypt_pbkdf (>= 1.0, < 2.0)
bigdecimal
capistrano (~> 3)
capistrano-bundler
capistrano-locally
capistrano-rbenv
crack (= 0.4.5)
cube-ruby
ed25519 (>= 1.2, < 2.0)
ffi (~> 1.16.3)
goo!
google-protobuf (= 3.25.3)
haml (~> 5.2.2)
json-ld
json-schema (~> 2.0)
minitest (~> 5.0)
minitest-hooks (~> 1.5)
minitest-stub_any_instance
multi_json
ncbo_annotator!
ncbo_cron!
ncbo_ontology_recommender!
newrelic_rpm
oj
ontologies_linked_data!
parallel
parseconfig
rack
rack-accept (~> 0.4)
rack-attack (~> 6.6.1)
rack-cache (~> 1.13.0)
rack-cors
rack-mini-profiler
rack-post-body-to-params!
rack-test
rack-timeout
rake (~> 10.0)
redcarpet
redis
redis-rack-cache (~> 2.0)
redis-store (~> 1.10)
request_store
rexml
rubocop
shotgun!
simplecov
simplecov-cobertura
sinatra (~> 1.0)
sinatra-advanced-routes
sinatra-contrib (~> 1.0)
sparql-client!
unicorn
unicorn-worker-killer
webmock (~> 3.19.1)
webrick
BUNDLED WITH
2.4.22