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docs.yml
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---
name: Publish Catalog 📰
on:
workflow_call:
secrets:
REPO_GITHUB_TOKEN:
description: |
Github token with write access to the repository
required: false
GCHAT_WEBHOOK:
description: |
Google Chat webhook to send failure notifications
required: false
workflow_dispatch:
push:
branches:
- main
schedule:
- cron: "17 17 * * 3,6"
jobs:
cache-refresh:
name: Refresh Cache ♽
runs-on: ubuntu-latest
if: github.event_name == 'schedule'
steps:
- name: Refresh Cache ♽
run: |
gh extension install actions/gh-actions-cache
echo "Fetching list of cache keys..."
cacheKeysForPR=$(gh actions-cache list -R $REPO -B $BRANCH -L 100 | cut -f 1 )
## Setting this to not fail the workflow while deleting cache keys.
set +e
echo "Deleting caches..."
for cacheKey in $cacheKeysForPR
do {
gh actions-cache delete $cacheKey -R $REPO -B $BRANCH --confirm
}
done
echo "Cache refresh completed."
env:
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
REPO: ${{ github.repository }}
BRANCH: ${{ github.event.repository.default_branch }}
publish-dev:
name: Build & Deploy TLGC (dev) 📖
runs-on: ubuntu-latest
container:
image: ghcr.io/insightsengineering/rstudio:latest
needs: cache-refresh
if: ${{ always() }}
permissions:
contents: write
steps:
- name: Checkout repo 🛎
uses: actions/[email protected]
- name: Cache artifacts 📀
uses: actions/cache@v4
with:
path: |
book/_freeze
key: ${{ runner.os }}-tlg-catalog-dev
- name: Normalize variables 📏
run: |
echo "gchat_webhook=${{ secrets.GCHAT_WEBHOOK }}" >> $GITHUB_ENV
shell: bash
- name: Setup R dependencies 🎦
uses: insightsengineering/setup-r-dependencies@v1
env:
GITHUB_PAT: ${{ steps.github-token.outputs.token }}
with:
repository-path: "./package"
skip-desc-branch: true
skip-desc-dev: true
repository-list: "r-universe-dev=https://pharmaverse.r-universe.dev/, PPM=PPM@latest"
cache-version: "dev"
- name: Render catalog 🖨
run: |
quarto render --profile development
shell: bash
working-directory: book
- name: Create artifact 📂
if: startsWith(github.ref, 'refs/tags/v')
run: |
zip -r9 ../../site.zip *
shell: bash
working-directory: book/_site
- name: Upload docs ⬆
if: startsWith(github.ref, 'refs/tags/v')
uses: actions/upload-artifact@v4
with:
name: site-development
path: site.zip
- name: Remove large WebR assets 🧹
run: |
packages_path <- sprintf("./book/_site/site_libs/quarto-contrib/shinylive-%s/shinylive/webr/packages", shinylive::assets_version())
# remove the dirs with size > 100 MB
for (x in list.dirs(packages_path)) {
x_files <- file.info(list.files(x, full.names = TRUE))
if (any(x_files$size > 100 * 1024^2)) {
print(x)
print(x_files)
unlink(x, recursive = TRUE)
}
}
# refresh the `metadata.rds` file
metadata_path <- file.path(packages_path, "metadata.rds")
metadata <- readRDS(metadata_path)
new_metadata <- metadata[intersect(names(metadata), list.dirs(packages_path, full.names = FALSE))]
saveRDS(new_metadata, metadata_path)
shell: Rscript {0}
- name: Publish docs 📔
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: ./book/_site
destination_dir: development
- name: GChat notification 🔔
if: (failure() || cancelled()) && env.gchat_webhook != ''
uses: insightsengineering/google-chat-notification@master
with:
name: ${{ github.event.repository.name }} - development
url: ${{ secrets.GCHAT_WEBHOOK }}
status: ${{ job.status }}
publish-stable:
name: Build & Deploy TLGC (stable) 📖
runs-on: ubuntu-latest
container:
image: ghcr.io/insightsengineering/rstudio:latest
permissions:
contents: write
needs:
- cache-refresh
if: ${{ always() }}
steps:
- name: Checkout repo 🛎
uses: actions/[email protected]
- name: Cache artifacts 📀
uses: actions/cache@v4
with:
path: |
book/_freeze
key: ${{ runner.os }}-tlg-catalog-stable
- name: Normalize variables 📏
run: |
echo "gchat_webhook=${{ secrets.GCHAT_WEBHOOK }}" >> $GITHUB_ENV
shell: bash
- name: Setup R dependencies 🎦
uses: insightsengineering/setup-r-dependencies@v1
env:
GITHUB_PAT: ${{ steps.github-token.outputs.token }}
with:
repository-path: "./package"
skip-desc-branch: true
skip-desc-dev: true
repository-list: "r-universe-stable=https://insightsengineering.r-universe.dev/, PPM=PPM@latest"
cache-version: "stable"
- name: Render catalog 🖨
run: |
quarto render --profile stable
shell: bash
working-directory: book
- name: Create artifact 📂
if: startsWith(github.ref, 'refs/tags/v')
run: |
zip -r9 ../../site.zip *
shell: bash
working-directory: book/_site
- name: Remove large WebR assets 🧹
run: |
packages_path <- sprintf("./book/_site/site_libs/quarto-contrib/shinylive-%s/shinylive/webr/packages", shinylive::assets_version())
# remove the dirs with size > 100 MB
for (x in list.dirs(packages_path)) {
x_files <- file.info(list.files(x, full.names = TRUE))
if (any(x_files$size > 100 * 1024^2)) {
print(x)
print(x_files)
unlink(x, recursive = TRUE)
}
}
# refresh the `metadata.rds` file
metadata_path <- file.path(packages_path, "metadata.rds")
metadata <- readRDS(metadata_path)
new_metadata <- metadata[intersect(names(metadata), list.dirs(packages_path, full.names = FALSE))]
saveRDS(new_metadata, metadata_path)
shell: Rscript {0}
- name: Upload docs ⬆
if: startsWith(github.ref, 'refs/tags/v')
uses: actions/upload-artifact@v4
with:
name: site-stable
path: site.zip
- name: Publish docs 📔
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: ./book/_site
destination_dir: stable
- name: GChat notification 🔔
if: (failure() || cancelled()) && env.gchat_webhook != ''
uses: insightsengineering/google-chat-notification@master
with:
name: ${{ github.event.repository.name }} - stable
url: ${{ secrets.GCHAT_WEBHOOK }}
status: ${{ job.status }}
upload-release-assets:
name: Upload assets 🔼
needs: [publish-dev, publish-stable]
runs-on: ubuntu-latest
if: >
startsWith(github.ref, 'refs/tags/v')
&& !contains(github.event.commits[0].message, '[skip docs]')
steps:
- name: Checkout repo 🛎
uses: actions/[email protected]
- name: Download artifact ⏬
uses: actions/download-artifact@v4
with:
name: site-development
path: site-development
- name: Download artifact ⏬
uses: actions/download-artifact@v4
with:
name: site-stable
path: site-stable
- name: Upload binaries to release ⤴
uses: svenstaro/upload-release-action@v2
with:
repo_token: ${{ secrets.GITHUB_TOKEN }}
file: site-development/site.zip
asset_name: catalog-development.zip
tag: ${{ github.ref }}
overwrite: true
- name: Upload binaries to release ⤴
uses: svenstaro/upload-release-action@v2
with:
repo_token: ${{ secrets.GITHUB_TOKEN }}
file: site-stable/site.zip
asset_name: catalog-stable.zip
tag: ${{ github.ref }}
overwrite: true