You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When clustering VCF records (as used by minos) proper handling of heterozygous genotypes. Previously if GT was N/M, N!=M, and N and M both non-zero, then the record would not get used. Now both alleles are added to the output.
Fix to only use alleles that comprise A,C,G,T characters only. Other alleles now ignored, instead of making it to the output and breaking minos. This stops in particular alleles like <foo> getting used, which are allowed in the VCF spec.