publish.yml

on:
  workflow_dispatch:
  push:
    branches: main

name: Quarto Publish

jobs:
  build-deploy:
    runs-on: ubuntu-latest
    permissions:
      contents: write
    steps:
      - name: Check out repository
        uses: actions/checkout@v4

      - name: Set up Quarto
        uses: quarto-dev/quarto-actions/setup@v2

      - name: Install R
        uses: r-lib/actions/setup-r@v2
        with:
          r-version: '4.4.1'
          use-public-rspm: true

      - name: Install R Dependencies
        uses: r-lib/actions/setup-r-dependencies@v2
        with:
          cache-version: 2
      
      - name: Additional Setup
        run: |
          # Install Python:
          sudo apt-get update
          sudo apt-get install python3
          sudo apt-get install python3-pip
          python3 -m pip install jupyter jupyter-cache

      - name: Render and Publish
        uses: quarto-dev/quarto-actions/publish@v2
        with:
          target: gh-pages
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}