diff --git a/cli/src/cli/generate/markdown.rs b/cli/src/cli/generate/markdown.rs
index 8fa4090..70a2952 100644
--- a/cli/src/cli/generate/markdown.rs
+++ b/cli/src/cli/generate/markdown.rs
@@ -86,9 +86,9 @@ const COMMANDS_INDEX_TEMPLATE: &str = r#"
 
 {% for cmd in commands -%}
 {% if multi_dir -%}
-* [`{{ cmd.full_cmd | join(sep=" ") }}`]({{ multi_dir }}/{% for c in cmd.full_cmd %}{{ c | slugify }}{% if not loop.last %}/{% endif %}{% endfor %}.md)
+* [`{{ bin }} {{ cmd.full_cmd | join(sep=" ") }}`]({{ multi_dir }}/{% for c in cmd.full_cmd %}{{ c | slugify }}{% if not loop.last %}/{% endif %}{% endfor %}.md)
 {% else -%}
-* [`{{ cmd.full_cmd | join(sep=" ") }}`](#{{ cmd.full_cmd | join(sep=" ") | slugify }})
+* [`{{ bin }} {{ cmd.full_cmd | join(sep=" ") }}`](#{{ bin | slugify }}-{{ cmd.full_cmd | join(sep=" ") | slugify }})
 {% endif -%}
 {% endfor -%}
 "#;
diff --git a/examples/docs/MISE_INLINE.md b/examples/docs/MISE_INLINE.md
index a89e576..4dff86d 100644
--- a/examples/docs/MISE_INLINE.md
+++ b/examples/docs/MISE_INLINE.md
@@ -54,70 +54,70 @@ foooooooo
 
 ## CLI Command Reference
 
-* [`activate`](#activate)
-* [`alias`](#alias)
-* [`alias get`](#alias-get)
-* [`alias ls`](#alias-ls)
-* [`alias set`](#alias-set)
-* [`alias unset`](#alias-unset)
-* [`bin-paths`](#bin-paths)
-* [`cache`](#cache)
-* [`cache clear`](#cache-clear)
-* [`completion`](#completion)
-* [`config`](#config)
-* [`config ls`](#config-ls)
-* [`config generate`](#config-generate)
-* [`current`](#current)
-* [`deactivate`](#deactivate)
-* [`direnv`](#direnv)
-* [`direnv activate`](#direnv-activate)
-* [`doctor`](#doctor)
-* [`env`](#env)
-* [`exec`](#exec)
-* [`implode`](#implode)
-* [`install`](#install)
-* [`latest`](#latest)
-* [`link`](#link)
-* [`ls`](#ls)
-* [`ls-remote`](#ls-remote)
-* [`outdated`](#outdated)
-* [`plugins`](#plugins)
-* [`plugins install`](#plugins-install)
-* [`plugins link`](#plugins-link)
-* [`plugins ls`](#plugins-ls)
-* [`plugins ls-remote`](#plugins-ls-remote)
-* [`plugins uninstall`](#plugins-uninstall)
-* [`plugins update`](#plugins-update)
-* [`prune`](#prune)
-* [`reshim`](#reshim)
-* [`run`](#run)
-* [`self-update`](#self-update)
-* [`set`](#set)
-* [`settings`](#settings)
-* [`settings get`](#settings-get)
-* [`settings ls`](#settings-ls)
-* [`settings set`](#settings-set)
-* [`settings unset`](#settings-unset)
-* [`shell`](#shell)
-* [`sync`](#sync)
-* [`sync node`](#sync-node)
-* [`sync python`](#sync-python)
-* [`tasks`](#tasks)
-* [`tasks deps`](#tasks-deps)
-* [`tasks edit`](#tasks-edit)
-* [`tasks ls`](#tasks-ls)
-* [`tasks run`](#tasks-run)
-* [`trust`](#trust)
-* [`uninstall`](#uninstall)
-* [`unset`](#unset)
-* [`upgrade`](#upgrade)
-* [`usage`](#usage)
-* [`use`](#use)
-* [`version`](#version)
-* [`watch`](#watch)
-* [`where`](#where)
-* [`which`](#which)
-* [`zzz`](#zzz)
+* [`mise activate`](#mise-activate)
+* [`mise alias`](#mise-alias)
+* [`mise alias get`](#mise-alias-get)
+* [`mise alias ls`](#mise-alias-ls)
+* [`mise alias set`](#mise-alias-set)
+* [`mise alias unset`](#mise-alias-unset)
+* [`mise bin-paths`](#mise-bin-paths)
+* [`mise cache`](#mise-cache)
+* [`mise cache clear`](#mise-cache-clear)
+* [`mise completion`](#mise-completion)
+* [`mise config`](#mise-config)
+* [`mise config ls`](#mise-config-ls)
+* [`mise config generate`](#mise-config-generate)
+* [`mise current`](#mise-current)
+* [`mise deactivate`](#mise-deactivate)
+* [`mise direnv`](#mise-direnv)
+* [`mise direnv activate`](#mise-direnv-activate)
+* [`mise doctor`](#mise-doctor)
+* [`mise env`](#mise-env)
+* [`mise exec`](#mise-exec)
+* [`mise implode`](#mise-implode)
+* [`mise install`](#mise-install)
+* [`mise latest`](#mise-latest)
+* [`mise link`](#mise-link)
+* [`mise ls`](#mise-ls)
+* [`mise ls-remote`](#mise-ls-remote)
+* [`mise outdated`](#mise-outdated)
+* [`mise plugins`](#mise-plugins)
+* [`mise plugins install`](#mise-plugins-install)
+* [`mise plugins link`](#mise-plugins-link)
+* [`mise plugins ls`](#mise-plugins-ls)
+* [`mise plugins ls-remote`](#mise-plugins-ls-remote)
+* [`mise plugins uninstall`](#mise-plugins-uninstall)
+* [`mise plugins update`](#mise-plugins-update)
+* [`mise prune`](#mise-prune)
+* [`mise reshim`](#mise-reshim)
+* [`mise run`](#mise-run)
+* [`mise self-update`](#mise-self-update)
+* [`mise set`](#mise-set)
+* [`mise settings`](#mise-settings)
+* [`mise settings get`](#mise-settings-get)
+* [`mise settings ls`](#mise-settings-ls)
+* [`mise settings set`](#mise-settings-set)
+* [`mise settings unset`](#mise-settings-unset)
+* [`mise shell`](#mise-shell)
+* [`mise sync`](#mise-sync)
+* [`mise sync node`](#mise-sync-node)
+* [`mise sync python`](#mise-sync-python)
+* [`mise tasks`](#mise-tasks)
+* [`mise tasks deps`](#mise-tasks-deps)
+* [`mise tasks edit`](#mise-tasks-edit)
+* [`mise tasks ls`](#mise-tasks-ls)
+* [`mise tasks run`](#mise-tasks-run)
+* [`mise trust`](#mise-trust)
+* [`mise uninstall`](#mise-uninstall)
+* [`mise unset`](#mise-unset)
+* [`mise upgrade`](#mise-upgrade)
+* [`mise usage`](#mise-usage)
+* [`mise use`](#mise-use)
+* [`mise version`](#mise-version)
+* [`mise watch`](#mise-watch)
+* [`mise where`](#mise-where)
+* [`mise which`](#mise-which)
+* [`mise zzz`](#mise-zzz)
 
 ## `mise activate`
 
diff --git a/examples/docs/MISE_MULTI.md b/examples/docs/MISE_MULTI.md
index 9b592b2..226086a 100644
--- a/examples/docs/MISE_MULTI.md
+++ b/examples/docs/MISE_MULTI.md
@@ -54,69 +54,69 @@ foooooooo
 
 ## CLI Command Reference
 
-* [`activate`](./cli-reference/activate.md)
-* [`alias`](./cli-reference/alias.md)
-* [`alias get`](./cli-reference/alias/get.md)
-* [`alias ls`](./cli-reference/alias/ls.md)
-* [`alias set`](./cli-reference/alias/set.md)
-* [`alias unset`](./cli-reference/alias/unset.md)
-* [`bin-paths`](./cli-reference/bin-paths.md)
-* [`cache`](./cli-reference/cache.md)
-* [`cache clear`](./cli-reference/cache/clear.md)
-* [`completion`](./cli-reference/completion.md)
-* [`config`](./cli-reference/config.md)
-* [`config ls`](./cli-reference/config/ls.md)
-* [`config generate`](./cli-reference/config/generate.md)
-* [`current`](./cli-reference/current.md)
-* [`deactivate`](./cli-reference/deactivate.md)
-* [`direnv`](./cli-reference/direnv.md)
-* [`direnv activate`](./cli-reference/direnv/activate.md)
-* [`doctor`](./cli-reference/doctor.md)
-* [`env`](./cli-reference/env.md)
-* [`exec`](./cli-reference/exec.md)
-* [`implode`](./cli-reference/implode.md)
-* [`install`](./cli-reference/install.md)
-* [`latest`](./cli-reference/latest.md)
-* [`link`](./cli-reference/link.md)
-* [`ls`](./cli-reference/ls.md)
-* [`ls-remote`](./cli-reference/ls-remote.md)
-* [`outdated`](./cli-reference/outdated.md)
-* [`plugins`](./cli-reference/plugins.md)
-* [`plugins install`](./cli-reference/plugins/install.md)
-* [`plugins link`](./cli-reference/plugins/link.md)
-* [`plugins ls`](./cli-reference/plugins/ls.md)
-* [`plugins ls-remote`](./cli-reference/plugins/ls-remote.md)
-* [`plugins uninstall`](./cli-reference/plugins/uninstall.md)
-* [`plugins update`](./cli-reference/plugins/update.md)
-* [`prune`](./cli-reference/prune.md)
-* [`reshim`](./cli-reference/reshim.md)
-* [`run`](./cli-reference/run.md)
-* [`self-update`](./cli-reference/self-update.md)
-* [`set`](./cli-reference/set.md)
-* [`settings`](./cli-reference/settings.md)
-* [`settings get`](./cli-reference/settings/get.md)
-* [`settings ls`](./cli-reference/settings/ls.md)
-* [`settings set`](./cli-reference/settings/set.md)
-* [`settings unset`](./cli-reference/settings/unset.md)
-* [`shell`](./cli-reference/shell.md)
-* [`sync`](./cli-reference/sync.md)
-* [`sync node`](./cli-reference/sync/node.md)
-* [`sync python`](./cli-reference/sync/python.md)
-* [`tasks`](./cli-reference/tasks.md)
-* [`tasks deps`](./cli-reference/tasks/deps.md)
-* [`tasks edit`](./cli-reference/tasks/edit.md)
-* [`tasks ls`](./cli-reference/tasks/ls.md)
-* [`tasks run`](./cli-reference/tasks/run.md)
-* [`trust`](./cli-reference/trust.md)
-* [`uninstall`](./cli-reference/uninstall.md)
-* [`unset`](./cli-reference/unset.md)
-* [`upgrade`](./cli-reference/upgrade.md)
-* [`usage`](./cli-reference/usage.md)
-* [`use`](./cli-reference/use.md)
-* [`version`](./cli-reference/version.md)
-* [`watch`](./cli-reference/watch.md)
-* [`where`](./cli-reference/where.md)
-* [`which`](./cli-reference/which.md)
-* [`zzz`](./cli-reference/zzz.md)
+* [`mise activate`](./cli-reference/activate.md)
+* [`mise alias`](./cli-reference/alias.md)
+* [`mise alias get`](./cli-reference/alias/get.md)
+* [`mise alias ls`](./cli-reference/alias/ls.md)
+* [`mise alias set`](./cli-reference/alias/set.md)
+* [`mise alias unset`](./cli-reference/alias/unset.md)
+* [`mise bin-paths`](./cli-reference/bin-paths.md)
+* [`mise cache`](./cli-reference/cache.md)
+* [`mise cache clear`](./cli-reference/cache/clear.md)
+* [`mise completion`](./cli-reference/completion.md)
+* [`mise config`](./cli-reference/config.md)
+* [`mise config ls`](./cli-reference/config/ls.md)
+* [`mise config generate`](./cli-reference/config/generate.md)
+* [`mise current`](./cli-reference/current.md)
+* [`mise deactivate`](./cli-reference/deactivate.md)
+* [`mise direnv`](./cli-reference/direnv.md)
+* [`mise direnv activate`](./cli-reference/direnv/activate.md)
+* [`mise doctor`](./cli-reference/doctor.md)
+* [`mise env`](./cli-reference/env.md)
+* [`mise exec`](./cli-reference/exec.md)
+* [`mise implode`](./cli-reference/implode.md)
+* [`mise install`](./cli-reference/install.md)
+* [`mise latest`](./cli-reference/latest.md)
+* [`mise link`](./cli-reference/link.md)
+* [`mise ls`](./cli-reference/ls.md)
+* [`mise ls-remote`](./cli-reference/ls-remote.md)
+* [`mise outdated`](./cli-reference/outdated.md)
+* [`mise plugins`](./cli-reference/plugins.md)
+* [`mise plugins install`](./cli-reference/plugins/install.md)
+* [`mise plugins link`](./cli-reference/plugins/link.md)
+* [`mise plugins ls`](./cli-reference/plugins/ls.md)
+* [`mise plugins ls-remote`](./cli-reference/plugins/ls-remote.md)
+* [`mise plugins uninstall`](./cli-reference/plugins/uninstall.md)
+* [`mise plugins update`](./cli-reference/plugins/update.md)
+* [`mise prune`](./cli-reference/prune.md)
+* [`mise reshim`](./cli-reference/reshim.md)
+* [`mise run`](./cli-reference/run.md)
+* [`mise self-update`](./cli-reference/self-update.md)
+* [`mise set`](./cli-reference/set.md)
+* [`mise settings`](./cli-reference/settings.md)
+* [`mise settings get`](./cli-reference/settings/get.md)
+* [`mise settings ls`](./cli-reference/settings/ls.md)
+* [`mise settings set`](./cli-reference/settings/set.md)
+* [`mise settings unset`](./cli-reference/settings/unset.md)
+* [`mise shell`](./cli-reference/shell.md)
+* [`mise sync`](./cli-reference/sync.md)
+* [`mise sync node`](./cli-reference/sync/node.md)
+* [`mise sync python`](./cli-reference/sync/python.md)
+* [`mise tasks`](./cli-reference/tasks.md)
+* [`mise tasks deps`](./cli-reference/tasks/deps.md)
+* [`mise tasks edit`](./cli-reference/tasks/edit.md)
+* [`mise tasks ls`](./cli-reference/tasks/ls.md)
+* [`mise tasks run`](./cli-reference/tasks/run.md)
+* [`mise trust`](./cli-reference/trust.md)
+* [`mise uninstall`](./cli-reference/uninstall.md)
+* [`mise unset`](./cli-reference/unset.md)
+* [`mise upgrade`](./cli-reference/upgrade.md)
+* [`mise usage`](./cli-reference/usage.md)
+* [`mise use`](./cli-reference/use.md)
+* [`mise version`](./cli-reference/version.md)
+* [`mise watch`](./cli-reference/watch.md)
+* [`mise where`](./cli-reference/where.md)
+* [`mise which`](./cli-reference/which.md)
+* [`mise zzz`](./cli-reference/zzz.md)
 
 <!-- [USAGE] -->