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Release date: NEXT
Release tag: NEXT
Changes:
- put changes here
- Redesign tomato genome project and data pages, splitting the tomato clone sequencing status report into its own page.
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Release date: Mon May 2 11:35:00 2011 -0800
Release tag: sgn-96.0
Changes:
- Fix marker detail page crashing bug (mueller).
- Integrated SecreTary results to secretion prediction search (tomfy).
- Updated SignalP results at http://solgenomics.net/secretom/detail/prediction for TAIR10 and ITAG2 releases of arabidopsis and tomato, respectively (tomfy).
---
Release date: Mon Apr 25 17:14:00 2011 -0800
Release tag: sgn-95.0
Changes:
- Major improvements to SecreTary calculation code (tomfy).
- ITAG2.3 tomato genome browser released (rob).
- Improvements to cross-linking between loci, gene models, and the quick search (rob).
- Improved quick search, now includes results from the genome browser and the feature detail pages (rob).
- Add BLAST buttons to many displayed sequences on feature pages and in the BLAST highlighted-sequence viewer, which allow users to BLAST these sequences with one click (rob).
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Release date: Wed Apr 13 10:12:00 2011 -0800
Release tag: sgn-93.0
Changes:
- New QTL effects section on population details pages (isaak).
- Bug fixes to Ontology tree AJAX browser on ontology term detail pages (naama).
- 'Polishing and bug fixes to feature detail pages: calculate the concept of "length" differently for some features. (rbuels)'
- Fixed bug in adding images on Stock detail pages (naama).
- Improved detail pages for polypeptide and mRNA features (rob).
- Layout improvements to "compare entire maps" tool (rob).
- TODO naama please add a note about 41178691fb9092daaf715f864b5f2cf053fa2b8e
- Improvements to BLAST report linking dialog box, better layout, now has a link to see the hit region in the genome browser if possible (rob).
- Performance improvements in BLAST highlighted-sequence viewer tool.
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Release date: Mon Mar 28 11:52:00 2011 -0800
Release tag: sgn-92.0
Changes:
- improved integration of solQTL with phenotypes and traits
- Behind-the-scenes cleanups to map viewer code.
- New search functions for tracking stock lines.
- Fix bug with ITAG2 annotation download registration, required 8 characters for Name field, and some people actually have first and last names that are shorter than this. Now requires 5.
- New stock page for accessions, individuals, and populations. Using Chado stock and NaturalDiversity modules for representing accession data and its phenotypes and genotypes.
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Release date: Mon Feb 7 11:30:00 2011 -0800
Release tag: sgn-88.0
Changes:
- Editorial improvements to solQTL pages, added link to solQTL publication.
- Many code cleanups behind the scenes.
---
Release date: Fri Jan 14 13:43:21 2011 -0800
Release tag: sgn-87.0
Changes:
- 'Improvements to Genomic details (i.e. feature) pages: add "Ontology terms" section, plus more.'
- Redesigned 'Contact Us' page.
- Simplified interstitial 'job running' page.
- International Tomato Annotation Group (ITAG) annotation bulk files now available for download, with newly rewritten download routines to record user information for each downloaded file.
- Fixed performance problems of International Tomato Sequencing project page.
---
Release date: Thu Dec 09 12:58:00 2010 -0800
Release tag: sgn-84.1
Changes:
- New easy-to-use trait search, linked from the breeders' toolbox.
- New features for tracking organism stocks using the Chado natural diversity module.
- "Fixed bug with BLAST tool: simple BLASTs were not filtering low-complexity sequence by default."
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Release date: Tue Nov 30 00:15:14 2010 -0800
Release tag: sgn-83.0
Changes:
- "Big new feature: gene model pages, integrated with locus pages and GBrowse."
- "New correlation heatmap on QTL pages."