workshops.Rmd

# Workshops

These materials can be used for independent study, but they have also been used to support:

  * in-person workshops (see below)
  * [STAT 545](http://stat545.com) at UBC
  * [UBC Master of Data Science](http://masterdatascience.science.ubc.ca)

## Pre-workshop set-up

Optional reading on the big picture motivation: [Why Git? Why GitHub?](#big-picture)

**It is vital that you attempt to set up your system in advance. You cannot show up at the workshop with no preparation and keep up!**

Try this. Best case scenario is about 1 - 2 hours. If you hit a wall, we will help:

  * [Register a free GitHub account](#github-acct).
  * [Install or update R and RStudio](#install-r-rstudio).
  * [Install Git](#install-git).
  * [Introduce yourself to Git](#hello-git).
  * [Configure a personal access token](#https-pat) or [set up SSH keys](#ssh-keys).
  * [Prove local Git can talk to GitHub](#push-pull-github).
  * [Prove RStudio can find local Git](#rstudio-git-github) and, therefore, can talk to GitHub.
    - FYI: this is where our hands-on activities usually start. We walk through a similar activity together, with narrative, and build from there.
  * Contemplate if you'd like to [install an optional Git client](#git-client), now or in future.

Troubleshooting:

  * Sometimes RStudio [needs a little help finding Git](#rstudio-see-git).
  * General troubleshooting: [RStudio, Git, GitHub Hell](#troubleshooting).

These are battle-tested instructions, so most will succeed. We believe in you! If you have trouble, reach out for help and stick with it. Where to get help:

  * If you are enrolled in an upcoming workshop, find it below to get specifics on pre-workshop support.
  * We *might* be able to respond to a GitHub issue [here](https://github.com/jennybc/happy-git-with-r/issues).
  * If there is a clear R/RStudio angle, post on <https://forum.posit.co/>.
  * General advice: search with Google and on <https://stackoverflow.com>, see also <https://github.community>.

## posit::conf 2023

1-day workshop: What They Forgot to Teach You About R  
Will have half-day coverage of Git/GitHub
Sep 17, [`posit.co/conference`](https://posit.co/conference/) Workshop Day, Chicago

Registered workshop participants should use [this thread](https://forum.posit.co/t/what-they-forgot-to-teach-you-about-r-workshop-rstudio-conf-2022/138999) on forum.posit.co to discuss system prep woes.

## Previous workshops

  * rstudio::conf 2022
   - 2-day workshop: What They Forgot to Teach You About R  
   - ~25% of content was Git/GitHub
   - July 25-26, 2022, Washington, D.C.
  * RaukR: Advanced R for Bioinformatics Summer School
    - June 13, 2022, online
  * rstudio::conf 2020
    - 2-day workshop: What They Forgot to Teach You About R  
    - ~25% of content was Git/GitHub + R/Rmd/RStudio  
    - January 27-28, 2020, San Francisco, CA
  * UBC Master of Data Science Program
    - Guest lecture on daily Git/GitHub workflows
    - January 9, 2020
  * RaukR: Advanced R for Bioinformatics Summer School
    - June 10-20, 2019, Visby, Sweden
  * rstudio::conf 2019
    - 2-day workshop: What They Forgot to Teach You About R  
    - ~25% of content was Git/GitHub + R/Rmd/RStudio  
    - Jan 15-16, 2019, Austin, TX
  * Seattle October 2018
    - 2-day workshop: [What They Forgot to Teach You About R](https://whattheyforgot.org/index.html#seattle-2018-october-4-5)  
    - 3 of 8 units on Git/GitHub + R/Rmd/RStudio  
    - Oct 4-5, 2018, The Westin Seattle
  * rstudio::conf 2018
    - 2-day workshop: What They Forgot to Teach You About R  
    - ~25% of content was Git/GitHub + R/Rmd/RStudio  
    - Jan 31 & Feb 1, 2018, San Diego, CA
  * CSAMA 2017: Statistical Data Analysis for Genome Biology
    - <http://www.huber.embl.de/csama2017/>  
    - June 11-16, 2017, Bressanone-Brixen, Italy  
  * satRday Cape Town 2017
    - <http://capetown2017.satrdays.org>  
    - February 16 - 18, 2017, Cape Town, South Africa
  * rstudio::conf 2017
    - <https://www.rstudio.com/conference/>  
    - January 13 - 14, 2017, Orlando, FL  
    - Saturday January 14, 10:15am to 12:30pm
  * CSAMA 2016: Statistical Data Analysis for Genome Biology
    - <http://www.huber.embl.de/csama2016/>  
    - July 10 - 15, 2016, Bressanone-Brixen, Italy  
  * useR! 2016 Stanford
    - <http://user2016.r-project.org>  
    - Monday, June 27, 2016  
    - [Using Git and GitHub with R, RStudio, and R Markdown](http://user2016.r-project.org/tutorials/01.html)