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Implement seq2seq model for gene clusters #14

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jgoodson opened this issue Jun 5, 2021 · 0 comments
Open

Implement seq2seq model for gene clusters #14

jgoodson opened this issue Jun 5, 2021 · 0 comments

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@jgoodson
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jgoodson commented Jun 5, 2021

https://github.com/FIRE-CB/TraGeC/blob/b7fde9ea3c9b38154533289aa3b68de45613eaf3/tragec/tasks/task_seq2seqclass.py#L69-L69

Our end goal is to do gene-level prediction of gene cluster membership. We do not currently have this feature. We should implement a sequence to sequence classification model to enable us to train and predict at an individual gene level on whole genomes or contigs.

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