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cannot find in Anacodon #363

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alantsangmb opened this issue May 20, 2024 · 2 comments
Closed

cannot find in Anacodon #363

alantsangmb opened this issue May 20, 2024 · 2 comments

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@alantsangmb
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I was unable to find TBProfiler version 6.2.1 in anacodon.
Will it be available in anacodon at a later time?
Thank you.

@jodyphelan
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jodyphelan commented May 20, 2024

Hi @alantsangmb

There is currently an issue with bioconda CI which is blocking the uppdate being merged into bioconda. I'll update as soon as it is resolved.

In the mean time, if you would like access to the latest features, you can update to the latest version manually by installing into an existing evironment with tb-profiler installed using:

pip install --force-reinstall git+https://github.com/jodyphelan/TBProfiler.git
pip install --force-reinstall git+https://github.com/jodyphelan/pathogen-profiler.git

@alantsangmb
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Thank you @jodyphelan

The package is now available in Anacodon, and I am hereby closing this issue.

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