Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

linux in untubu 20.04 ACR Phantoms analyse error #513

Open
djp82645 opened this issue Sep 3, 2024 · 5 comments
Open

linux in untubu 20.04 ACR Phantoms analyse error #513

djp82645 opened this issue Sep 3, 2024 · 5 comments

Comments

@djp82645
Copy link

djp82645 commented Sep 3, 2024

hi,i have some problem use by linux.

it's work well in windows.but in linux have some error and diff in windows so well.
error like this:
1 Could not determine the roll of the phantom. Ensure the 20mm top-left circle is visible on Slice 1
2 The physical scan extent does not cover the extent of module configuration. This means not all modules were included in the scan. Rescan the phantom to include all relevant modules, or change the offset values.

file and analyse results for example:
windows results:

  • ACR MRI Large Results -
    Geometric Distortions: {'horizontal': '19.53mm', 'vertical': '18.56mm', 'negative diagonal': '11.05mm',
    'positive diagonal': '12.43mm'}
    Slice Thickness: 5.19mm
    Slice 1 S/I Position shift: -0.49mm
    Slice 11 S/I Position shift: 0.00mm
    Uniformity PIU: 86.16
    Percent-signal ghosting: 0.02%
    Uniformity Center ROI standard deviation: 338.24
    Row-wise MTF 50% (lp/mm): 1.03
    Column-wise MTF 50% (lp/mm): 0.97

linux results:

  • ACR MRI Large Results -
    Geometric Distortions: {'horizontal': '189.46mm', 'vertical': '167.00mm', 'negative diagonal': '189.21mm',
    'positive diagonal': '186.38mm'}
    Slice Thickness: 2.12mm
    Slice 1 S/I Position shift: 0.00mm
    Slice 11 S/I Position shift: 0.00mm
    Uniformity PIU: 85.54
    Percent-signal ghosting: 0.01%
    Uniformity Center ROI standard deviation: 353.50
    Row-wise MTF 50% (lp/mm): 0.69
    Column-wise MTF 50% (lp/mm): 0.85

analyse file:
QA-2024028.zip
Looking forward to your reply.
Thank you!

@jrkerns
Copy link
Owner

jrkerns commented Sep 4, 2024

Haven't seen that one before. Can you share your numpy and scipy versions from each environment? That might also help narrow it down. Thanks.

@djp82645
Copy link
Author

Haven't seen that one before. Can you share your numpy and scipy versions from each environment? That might also help narrow it down. Thanks.
linux
scipy==1.11.3
numpy==1.26.1
pylinac==3.20.0
windows
scipy==1.11.3
numpy==1.26.1
pylinac==3.20.0
the environment of numpy and scipy versions is same.

@djp82645
Copy link
Author

Haven't seen that one before. Can you share your numpy and scipy versions from each environment? That might also help narrow it down. Thanks.
linux
scipy==1.11.3
numpy==1.26.1
pylinac==3.20.0
windows
scipy==1.11.3
numpy==1.26.1
pylinac==3.20.0
the environment of numpy and scipy versions is same.

or can you give me that pylinac docoumt's file.I will test it in windows and linux.
image

@jrkerns
Copy link
Owner

jrkerns commented Sep 26, 2024

That's just a made-up file name for demonstration purposes.

@djp82645
Copy link
Author

That's just a made-up file name for demonstration purposes.

well,but why have error analyse in liunx. that I test in two manchine in liunx and environment is same use the same file.but one analyse suceesful.but other is error,error is:Could not determine the roll of the phantom. Ensure the 20mm top-left circle is visible on Slice 1.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants