From f8860d8fa1fec7da0632bb4827fa0e3fa5cd6504 Mon Sep 17 00:00:00 2001 From: Diwank Tomer Date: Mon, 26 Aug 2024 19:52:18 -0400 Subject: [PATCH] feat(memory-store): Add backup cronjob Signed-off-by: Diwank Tomer --- memory-store/Dockerfile | 15 +-- memory-store/backup.sh | 37 ++++++ memory-store/backup/backup.py | 49 ------- memory-store/backup/poetry.lock | 203 ----------------------------- memory-store/backup/pyproject.toml | 16 --- memory-store/deploy.sh | 8 -- memory-store/docker-compose.yml | 17 ++- memory-store/run.sh | 5 +- 8 files changed, 62 insertions(+), 288 deletions(-) create mode 100644 memory-store/backup.sh delete mode 100644 memory-store/backup/backup.py delete mode 100644 memory-store/backup/poetry.lock delete mode 100644 memory-store/backup/pyproject.toml delete mode 100755 memory-store/deploy.sh diff --git a/memory-store/Dockerfile b/memory-store/Dockerfile index c23730edd..e131116f8 100644 --- a/memory-store/Dockerfile +++ b/memory-store/Dockerfile @@ -4,7 +4,7 @@ # Then copy the run.sh script to the ./run.sh file # First stage: Build the Rust project -FROM rust:1.80.1-bookworm as builder +FROM rust:1.80.1-bookworm AS builder # Install liburing-dev RUN apt-get update && apt-get install -y liburing-dev @@ -32,26 +32,25 @@ FROM debian:bookworm-slim # Install dependencies RUN \ apt-get update -yqq && \ - apt-get install -y ca-certificates tini nfs-common nfs-kernel-server procps netbase && \ + apt-get install -y liburing-dev curl ca-certificates tini nfs-common nfs-kernel-server procps netbase && \ apt-get clean && \ rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/* # Set fallback mount directory -ENV MNT_DIR /data - -ENV APP_HOME /app +ENV MNT_DIR=/data APP_HOME=/app BACKUP_DIR=/backup WORKDIR $APP_HOME # Copy the cozo binary -COPY --from=builder /usr/local/bin/cozo $APP_HOME/bin/cozo-bin +COPY --from=builder /usr/local/bin/cozo $APP_HOME/bin/cozo # Copy local code to the container image. COPY ./run.sh ./run.sh +COPY ./backup.sh ./backup.sh # Ensure the script is executable RUN \ - mkdir -p $MNT_DIR && \ - chmod +x $APP_HOME/bin/cozo-bin && \ + mkdir -p $MNT_DIR $BACKUP_DIR && \ + chmod +x $APP_HOME/bin/cozo && \ chmod +x $APP_HOME/run.sh # Use tini to manage zombie processes and signal forwarding diff --git a/memory-store/backup.sh b/memory-store/backup.sh new file mode 100644 index 000000000..1e9e12e5c --- /dev/null +++ b/memory-store/backup.sh @@ -0,0 +1,37 @@ +#!/usr/bin/env bash + +set -eo pipefail # Exit on error +set -u # Exit on undefined variable + +# Ensure environment variables are set +if [ -z "$COZO_PORT" ] || [ -z "$COZO_AUTH_TOKEN" ]; then + echo "COZO_PORT or COZO_AUTH_TOKEN is not set" + exit 1 +fi + +COZO_BACKUP_DIR=${COZO_BACKUP_DIR:-/backup} +TIMESTAMP=$(date +%Y-%m-%d_%H-%M-%S) +MAX_BACKUPS=${MAX_BACKUPS:-10} + +curl -X POST \ + http://0.0.0.0:$COZO_PORT/backup \ + -H 'Content-Type: application/json' \ + -H "X-Cozo-Auth: ${COZO_AUTH_TOKEN}" \ + -d "{\"path\": \"${COZO_BACKUP_DIR}/cozo-backup-${TIMESTAMP}.bk\"}" \ + -w "\nStatus: %{http_code}\nResponse:\n" \ + -o /dev/stdout + +# Print the number of backups +echo "Number of backups: $(ls -l ${COZO_BACKUP_DIR} | grep -c "cozo-backup-")" + +# If the backup is successful, remove the oldest backup if the number of backups exceeds MAX_BACKUPS +if [ $(ls -l ${COZO_BACKUP_DIR} | grep -c "cozo-backup-") -gt $MAX_BACKUPS ]; then + oldest_backup=$(ls -t ${COZO_BACKUP_DIR}/cozo-backup-*.bk | tail -n 1) + + if [ -n "$oldest_backup" ]; then + rm "$oldest_backup" + echo "Removed oldest backup: $oldest_backup" + else + echo "No backups found to remove" + fi +fi \ No newline at end of file diff --git a/memory-store/backup/backup.py b/memory-store/backup/backup.py deleted file mode 100644 index 0f0ce3da9..000000000 --- a/memory-store/backup/backup.py +++ /dev/null @@ -1,49 +0,0 @@ -import os -import time -import fire -import requests -from datetime import datetime, timezone - - -TWO_DAYS = 60 * 60 * 24 * 2 - - -def cleanup(ext, path, keep): - for f in os.listdir(path): - if not f.endswith(ext): - continue - - fn = os.path.join(path, f) - try: - stats = os.stat(fn) - if datetime.now(timezone.utc).timestamp() - stats.st_ctime >= keep: - os.remove(fn) - except FileNotFoundError: - print(f"file not found {fn}") - continue - - -def main(backup_dir, keep=TWO_DAYS, timeout=30 * 60, url="http://0.0.0.0:9070/backup", file_prefix="cozo-backup"): - while True: - cleanup(".bk", backup_dir, keep) - - for _ in range(5): - backup_fn = f"{file_prefix}-{datetime.now(timezone.utc).strftime('%Y-%m-%d_%H:%M:%S.%f')}.bk" - resp = requests.post( - url, - json={ - "path": os.path.join(backup_dir, backup_fn), - }, - ) - try: - resp.raise_for_status() - break - except: - time.sleep(10) - continue - - time.sleep(timeout) - - -if __name__ == "__main__": - fire.Fire(main) \ No newline at end of file diff --git a/memory-store/backup/poetry.lock b/memory-store/backup/poetry.lock deleted file mode 100644 index 5c47e4ed5..000000000 --- a/memory-store/backup/poetry.lock +++ /dev/null @@ -1,203 +0,0 @@ -# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. - -[[package]] -name = "certifi" -version = "2023.11.17" -description = "Python package for providing Mozilla's CA Bundle." -optional = false -python-versions = ">=3.6" -files = [ - {file = "certifi-2023.11.17-py3-none-any.whl", hash = "sha256:e036ab49d5b79556f99cfc2d9320b34cfbe5be05c5871b51de9329f0603b0474"}, - {file = "certifi-2023.11.17.tar.gz", hash = "sha256:9b469f3a900bf28dc19b8cfbf8019bf47f7fdd1a65a1d4ffb98fc14166beb4d1"}, -] - -[[package]] -name = "charset-normalizer" -version = "3.3.2" -description = "The Real First Universal Charset Detector. 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-[tool.poetry.dependencies] -python = "^3.11" -requests = "^2.31.0" -fire = "^0.5.0" - - -[build-system] -requires = ["poetry-core"] -build-backend = "poetry.core.masonry.api" diff --git a/memory-store/deploy.sh b/memory-store/deploy.sh deleted file mode 100755 index 37ea45bef..000000000 --- a/memory-store/deploy.sh +++ /dev/null @@ -1,8 +0,0 @@ -#!/usr/bin/env sh - -gcloud run deploy julep-cozo-server-1 --source . \ - --vpc-connector vpc-connector-1 \ - --execution-environment gen2 \ - --allow-unauthenticated \ - --service-account cozo-nfs-identity \ - --update-env-vars FILESTORE_IP_ADDRESS=`gcloud filestore instances describe julep-nfs-1 --format "value(networks.ipAddresses[0])"`,FILE_SHARE_NAME=cozo_data,COZO_ROCKSDB_FILE=september_19_2023.cozo.db diff --git a/memory-store/docker-compose.yml b/memory-store/docker-compose.yml index ebe6cd7a9..14872fae1 100644 --- a/memory-store/docker-compose.yml +++ b/memory-store/docker-compose.yml @@ -9,6 +9,7 @@ services: - COZO_AUTH_TOKEN=${COZO_AUTH_TOKEN} - COZO_PORT=${COZO_PORT} - MNT_DIR=/data + - COZO_BACKUP_DIR=/backup container_name: memory-store volumes: - cozo_data:/data @@ -17,5 +18,19 @@ services: ports: - "9070:9070" + labels: + ofelia.enabled: "true" + ofelia.job-exec.backupcron.schedule: "@every 1h" + ofelia.job-exec.backupcron.environment: '["COZO_PORT=${COZO_PORT}", "COZO_AUTH_TOKEN=${COZO_AUTH_TOKEN}", "COZO_BACKUP_DIR=${COZO_BACKUP_DIR}"]' + ofelia.job-exec.backupcron.command: bash /app/backup.sh + + memory-store-backup-cron: + image: mcuadros/ofelia:latest + depends_on: + - memory-store + command: daemon --docker -f label=com.docker.compose.project=${COMPOSE_PROJECT_NAME} + volumes: + - /var/run/docker.sock:/var/run/docker.sock:ro + volumes: - cozo_data: + cozo_data: \ No newline at end of file diff --git a/memory-store/run.sh b/memory-store/run.sh index ef9ca84cf..852350cda 100755 --- a/memory-store/run.sh +++ b/memory-store/run.sh @@ -12,9 +12,8 @@ export COZO_ROCKSDB_DIR=${COZO_ROCKSDB_DIR:-cozo.db} echo $COZO_AUTH_TOKEN > $MNT_DIR/${COZO_ROCKSDB_DIR}.rocksdb.cozo_auth # Start server -${APP_HOME:=.}/bin/cozo-bin server \ +${APP_HOME:=.}/bin/cozo server \ --engine rocksdb \ --path $MNT_DIR/${COZO_ROCKSDB_DIR} \ --bind 0.0.0.0 \ - --port ${COZO_PORT:=9070} \ - --token-table __tokens + --port ${COZO_PORT:=9070}