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C:\Users\username>baysor -v; but I got julia version 1.10.7? #154

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KunHHE opened this issue Jan 22, 2025 · 1 comment
Open

C:\Users\username>baysor -v; but I got julia version 1.10.7? #154

KunHHE opened this issue Jan 22, 2025 · 1 comment

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@KunHHE
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KunHHE commented Jan 22, 2025

Hi @VPetukhov, thanks fro your time on this issue.
I installed GCC and julia, then the BAYSOR dependencies for sopa usage.
using CLI:
juliaup add 1.10;
juliaup default 1.10;
julia -e "using Pkg; Pkg.add(PackageSpec(url="https://github.com/kharchenkolab/Baysor.git")); Pkg.build()"

Then in the CLI I test: 'baysor segfree -c C:/Users/hekun/sopa/workflow/config/merscope/merscope.toml C:/Users/hekun/Downloads/Slide1307/detected_transcripts.csv', looks it is working in the baysor itself?

But interesting and weird thing is when I used: (sopa)C:\Users\hekun>baysor -v; I got julia version 1.10.7..... Can you guide me why I get this thing?

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@VPetukhov
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Hi @KunHHE ,

Could you please clarify what is the problem exactly? So, you installed julia 1.10 and the version is 1.10.7, which is fine, as it's a subset of 1.10.

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