template_a4.tex

% This is the Reed College LaTeX thesis template. Most of the work
% for the document class was done by Sam Noble (SN), as well as this
% template. Later comments etc. by Ben Salzberg (BTS). Additional
% restructuring and APA support by Jess Youngberg (JY).
% Your comments and suggestions are more than welcome; please email
% them to cus@reed.edu
%

% \documentclass{<something>} must begin each LaTeX document
\documentclass[11pt, singlespacing, twoside]{reedthesis} %,headseplin

\usepackage{flipbook} % to create the flipbook
\usepackage{pdfpages}
\usepackage{pgf}
\usepackage{graphicx, latexsym}
\usepackage{lastpage}
\usepackage{amsmath}
\usepackage{amssymb, amsthm}
\usepackage{longtable, booktabs, setspace}
\usepackage{chemarr} %% Useful for one reaction arrow, useless if you're not a chem major
\usepackage[hyphens]{url}
\usepackage{hyperref}
\usepackage{lmodern}
\usepackage{float}
\usepackage{rotating}
\usepackage{enumitem}
\usepackage{tcolorbox} % text boxes
\usepackage{fancyhdr} % flipbook stuff
%\usepackage{fancy} % footer / header margins
\usepackage{pgf} % flipbook stuff
\usepackage{blindtext} % alternate chapter / section in header
\usepackage[font=small,labelfont=bf]{caption} % figure caption options

% geometry
%\usepackage[pass]{geometry}
%\usepackage[footskip=10mm+8pt]{geometry} % fix papersize geometry
%\renewcommand{\footruleskip}{10mm}

% footer
%\usepackage[bottom]{footmisc} % fix footer position https://mirror.hmc.edu/ctan/macros/latex/contrib/footmisc/footmisc.pdf

%\setlist{leftmargin=0.6em, topsep=-0.5mm, itemsep=-0.3em}

% Added by CII (Thanks, Hadley!), use ref for internal links
%\renewcommand{\hyperref}[2][???]{\autoref{#1}}
\def\chapterautorefname{Chapter}
\def\sectionautorefname{Section}
\def\subsectionautorefname{Subsection}
% End of CII addition

% Added by CII
\usepackage{caption}
\captionsetup{width = 5in}
% End of CII addition
% \usepackage{times} % other fonts are available like times, bookman, charter, palatino
% Syntax highlighting #22
$if(highlighting-macros)$
  $highlighting-macros$
$endif$

% To pass between YAML and LaTeX, use dollar signs
\title{$title$}
\author{$author$}
\date{$date$}
\division{$division$}
\advisor{$advisor$}
\institution{$institution$}
\degree{$degree$}
$if(altadvisor)$
  \altadvisor{$altadvisor$}
$endif$
\department{$department$}

% Added by CII
%% Copied from knitr
%% maxwidth is the original width if it's less than linewidth
%% otherwise use linewidth (to make sure the graphics do not exceed the margin)
\makeatletter
\def\maxwidth{ %
  \ifdim\Gin@nat@width>\linewidth
    \linewidth
  \else
    \Gin@nat@width
  \fi
}
\makeatother
\renewcommand{\contentsname}{Table of Contents}
% End of CII addition

\setlength{\parskip}{0pt}

% Added by CII
$if(space_between_paragraphs)$
  %\setlength{\parskip}{\baselineskip}
  \usepackage[parfill]{parskip}
$endif$

\providecommand{\tightlist}{%
  \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}

\Abstract{$abstract$}

$for(header-includes)$
	$header-includes$
$endfor$
% End of CII addition

% link coloring & url style

\hypersetup{
  colorlinks = true,
  citecolor = black,
  linkcolor = black,
  anchorcolor = black,
  filecolor = black,      
  urlcolor = black,
  bookmarks = true,
  linktocpage = true
}

% eletronic pdf
%\hypersetup{
%  colorlinks = true,
%  citecolor = blue,
%  linkcolor = blue,
%  anchorcolor = blue,
%  filecolor = blue,      
% urlcolor = blue,
%  bookmarks = true,
%  linktocpage = true
%}

\urlstyle{same}

% required addition for csl references
% found at https://github.com/mpark/wg21/issues/54#issuecomment-764026431

$if(csl-refs)$
  \newlength{\cslhangindent}
  \setlength{\cslhangindent}{.5in}
  \newlength{\csllabelwidth}
  \setlength{\csllabelwidth}{.2in}
  \setlength{\parindent}{0pt}
  \setlength{\oddsidemargin}{.2in}
  \setlength{\evensidemargin}{.2in}
  \setlength{\textwidth}{6.0in}
  \setlength{\textheight}{7.2in} 
  \newenvironment{CSLReferences}[3] % #1 hanging-ident, #2 entry spacing
  {% don't indent paragraphs
    \setlength{\parindent}{0pt}
    % turn on hanging indent if param 1 is 1
    \ifodd #1 \everypar{\setlength{\hangindent}{\cslhangindent}}\ignorespaces\fi
    % set entry spacing
    \ifnum #2 > 0
    \setlength{\parskip}{#2\baselineskip}
    \fi
  }%
  {}
  \usepackage{calc} % for \widthof, \maxof
  \newcommand{\CSLBlock}[1]{#1\hfill\break}
  \newcommand{\CSLLeftMargin}[1]{\parbox[t]{\maxof{\widthof{#1}}{\csllabelwidth}}{#1}}
  \newcommand{\CSLRightInline}[1]{\parbox[t]{\linewidth}{#1}}
  \newcommand{\CSLIndent}[1]{\hspace{\cslhangindent}#1}
$endif$

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%% Begin Document %%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\begin{document}

\pagenumbering{roman} % Make sure a page numbering scheme is explicitly set at the beginning.

$if(title)$
  \maketitle
$endif$

\frontmatter
\pagenumbering{roman} % this stuff will be roman-numbered
\pagestyle{empty} % this removes page numbers from the frontmatter

$if(toc)$
  %\hypersetup{linkcolor=$if(toccolor)$$toccolor$$else$black$endif$}
  \setcounter{tocdepth}{$toc-depth$}
  \tableofcontents
$endif$

$if(lot)$
  \listoftables
$endif$

$if(lof)$
  \listoffigures
  \vfill
  \begin{center}
    \textbf{Disclosure}\\
    {$disclosure$}
  \end{center}
$endif$

$if(abstract)$
  \begin{abstract}
    $abstract$
  \end{abstract}
$endif$

\mainmatter 
% here the regular arabic numbering starts
% Make sure a page numbering scheme is explicitly set at the beginning of Chap 1 (see Chap 1)
% \pagestyle{fancyplain} turns page numbering back on

$body$

\end{document}