copy snakemake entrypoint if it exists in all dockerfiles

Signed-off-by: Ayush Kamat <[email protected]>
latchbio · Oct 18, 2023 · 2191676 · 2191676
1 parent 7f1dddc
commit 2191676
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/latch_cli/docker_utils/__init__.py b/latch_cli/docker_utils/__init__.py
@@ -379,7 +379,9 @@ def generate_dockerfile(
             block.write_block(f)
 
         f.write("# Copy workflow data (use .dockerignore to skip files)\n")
-        f.write("copy . /root/\n\n")
+
+        # this will only copy the snakemake entrypoint (if it exists) due to .dockerignore
+        f.write("copy . .latch/* /root/\n\n")
 
         for block in commands:
             if block.order != DockerCmdBlockOrder.postcopy: