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example_PPMT_6variate.m
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addpath(genpath('Quality Control'))
addpath(genpath('Third Party'))
%% %%%%% CLEAN WORKSPACE AND PREVIOUS SIMULATION FILES %%%%%
close all;
clc;clear;
if exist('Third Party/ppmt_le/par/','dir');rmdir('Third Party/ppmt_le/par/','s');mkdir('Third Party/ppmt_le/par/');else mkdir('Third Party/ppmt_le/par/');end
if exist('Third Party/ppmt_le/data/','dir');rmdir('Third Party/ppmt_le/data/','s');mkdir('Third Party/ppmt_le/data/');else mkdir('Third Party/ppmt_le/data/');end
if exist('sgsim.dbg');delete('sgsim.dbg');end
load('datasets/HardData_ReferenceModel_size100_range20.mat');
%load('datasets/HardData_ReferenceModel_size40_range20.mat');
n_cond_points = 200;
cond_value_ = cond_value(1:n_cond_points ,:);
cond_pos_ = cond_pos(1:n_cond_points ,:);
%% EXECUTION OF PROJECTION PERSUIT MULTIVARIATE TRANSFORMATION (PPMT)
% Connectionism and Cognitive Science Lab
%
%% DATA PREPARATION FOR PPMT
load('datasets/reference_data.mat');
reference_logs = [z1_analytic, z2_analytic, z3_analytic, z4_analytic, z5_analytic, z6_analytic];
I = size(reference_models,2);
J = size(reference_models,3);
simulation_ranges = [18 18];
dx_ref = 200;
dy_ref = 200;
n_vars = 6; %number of variables to simulate
index_variables_to_sim = 1:n_vars;
K = 10000; %make reference data positive
analytic_ref_logs = [z1_analytic, z2_analytic, z3_analytic, z4_analytic, z5_analytic, z6_analytic];
variable_names = {'z1','z2','z3','z4','z5','z6'};
variable_names = variable_names(index_variables_to_sim);
%CREATE GRID FOR REFERENCE DATA
y = repmat(1:dy_ref,[dx_ref 1]);x = repmat(1:dx_ref,[dy_ref 1])';z = ones(dx_ref,dy_ref);
grid_v = [reshape(x,[dy_ref*dx_ref 1]) reshape(y,[dy_ref*dx_ref 1]) reshape(z,[dy_ref*dx_ref 1])];
%[cond_pos_,ind_cond_unique] = unique(cond_pos_,'rows');
condtioning_indexes = zeros(size(grid_v,1),1);
for cp_id = 1:size(cond_pos_,1)
ind = logical(ismember(grid_v(:,1),cond_pos_(cp_id,1)))&...
logical(ismember(grid_v(:,2),cond_pos_(cp_id,2)));
analytic_ref_logs(ind,:) = cond_value_(cp_id,:);
condtioning_indexes = condtioning_indexes + double(ind);
end
analytic_ref_logs = analytic_ref_logs(:,index_variables_to_sim)+K;
%SAVE DATA
save_table_dat('Reference Values',['X','Y','Z',variable_names(1:end)],'Third Party/ppmt_le/data/data.dat', [grid_v analytic_ref_logs] );
%% %%%%% EXECUTE PPMT FORWARD %%%%%
ppmt_param.n_vars = n_vars;
ppmt_param.columns = 4:(n_vars+3);
ppmt_param.ppmt_par_file = 'Third Party/ppmt_le/par/ppmt_par_file.par';
ppmt_param.ref_file = 'Third Party/ppmt_le/data/data.dat';
ppmt_param.nscored_f = 'Third Party/ppmt_le/data/nscored_vars.dat';
ppmt_param.ppmt_out = 'Third Party/ppmt_le/data/ppmt.dat';
ppmt_param.ppmt_table_file = 'Third Party/ppmt_le/par/ppmt_table.trn';
generate_ppmt_par(ppmt_param);
tic
system(['"Third Party/ppmt_le/exe/ppmt.exe" "',ppmt_param.ppmt_par_file,'"']);
forward_transformation_time = toc;
%Prepare Conditioning Points table
ppmt_out_original = read_eas('Third Party/ppmt_le/data/ppmt.dat');
ppmt_logs = ppmt_out_original(logical(condtioning_indexes),[1 2 3 end-n_vars+1:end]);
save_table_dat('Conditioning_Points',['X','Y', 'Z',variable_names],'Third Party/ppmt_le/data/ppmt.dat', ppmt_logs);
%%%
%% %%%%% EXECUTE SEQUENTIAL GAUSSIAN SIMULATION %%%%%
ppmt_out = read_eas(ppmt_param.ppmt_out);
ppmt_out = ppmt_out(:,end-n_vars+1:end);
for sim_id = 1:n_vars
sgs_param = [];
sgs_param.min = min(ppmt_out(:,sim_id));
sgs_param.max = max(ppmt_out(:,sim_id));
sgs_param.cellsx = I;
sgs_param.cellsy = J;
column_id = 3 + sim_id;
sgs_param.variogram_model = 1; %1.Sph; 2.Exp; 3.Gauss; 4.Power; 5.Cossine
sgs_param.range = simulation_ranges;
sgs_param.seed = [num2str(sim_id),'69069'];%2*(randi(9598)+randi(9598)+randi(9598))+1;
sgs_param.search_radius = sgs_param.range*4;
sgs_param.sgs_par_file = ['Third Party/ppmt_le/par/sgs',num2str(sim_id),'.par'];
sgs_param.input_file = 'Third Party/ppmt_le/data/ppmt.dat';
sgs_param.output_file = ['Third Party/ppmt_le/data/sgs',num2str(sim_id),'.dat'];
generate_sgs_par(sgs_param,column_id);
system(['"Third Party/ppmt_le/exe/sgsim.exe" "',sgs_param.sgs_par_file,'"']);
end
%PUT THE SIMULATIONS TOGETHER:
simulations = [];
for sim_id = 1:n_vars
simulations = [simulations,dlmread(['Third Party/ppmt_le/data/sgs',num2str(sim_id),'.dat'],'\t',3,0)];
% delete(['data/sgs',num2str(sim_id),'.dat']);
end
save_table_dat('Unconditional SGS Simulations',variable_names,'Third Party/ppmt_le/data/sgs.dat', simulations);
%% %%%%% EXECUTE PPMT BACK TRANSFORMATION %%%%%
ppmt_b_param.n_vars = n_vars;
ppmt_b_param.min_max = [min(min(analytic_ref_logs)),max(max(analytic_ref_logs))];
ppmt_b_param.columns = 1:n_vars;
ppmt_b_param.cellsx = I;
ppmt_b_param.cellsy = J;
ppmt_b_param.ppmtb_par_file = 'Third Party/ppmt_le/par/ppmtb_par_file.par';
ppmt_b_param.transf_table = ppmt_param.ppmt_table_file;
ppmt_b_param.input_file = 'Third Party/ppmt_le/data/sgs.dat';
ppmt_b_param.output_file = 'Third Party/ppmt_le/data/out_simulations.out';
generate_ppmtb_par(ppmt_b_param);
before_ppmtb_time = toc;
system(['"Third Party/ppmt_le/exe/ppmt_b.exe" "',ppmt_b_param.ppmtb_par_file,'"']);
total_simulation_time = toc;
simulation_ppmt = read_eas(ppmt_b_param.output_file)-K;
save_table_dat('PPMT Back Transform: Conditional SGS Simulations',...
variable_names,ppmt_b_param.output_file,simulation_ppmt);
disp(['Time for Total Simulation: ',num2str(total_simulation_time)]);
disp(['Time for PPMT Forward Transformation: ',num2str(forward_transformation_time)]);
disp(['Time for PPMT Back Transformation: ',num2str(total_simulation_time-before_ppmtb_time)]);
%% END OF SIMULATIONS AND DATA TRANSFORMATION
generate_2D(reference_models,cond_pos_)
set_caxis_6variate
generate_2D(reshape(simulation_ppmt',6,I,I),cond_pos_)
set_caxis_6variate
generate_histograms(reshape(reference_models,6,I*J)')
generate_histograms(simulation_ppmt)
load('datasets/reference_data.mat');
reference = [z1_analytic z2_analytic, z3_analytic, z4_analytic, z5_analytic, z6_analytic];
num_of_bins = 50;
aux_ppmt = [ simulation_ppmt(:,1) simulation_ppmt(:,2) simulation_ppmt(:,3) simulation_ppmt(:,4) simulation_ppmt(:,5) simulation_ppmt(:,6)];
chi2_ppmt = generate_chi2(reference,aux_ppmt, num_of_bins,0)