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pulp_util.cpp
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pulp_util.cpp
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#include <assert.h>
#include <mpi.h>
#include <omp.h>
#include <stdint.h>
#include <stdio.h>
#include <stdlib.h>
#include <cstring>
#include <fstream>
#include "pulp_data.h"
#include "pulp_util.h"
#include "xtrapulp.h"
extern int procid, nprocs;
extern bool verbose, debug, verify;
int part_eval(dist_graph_t* g, pulp_data_t* pulp) {
for (int32_t i = 0; i < pulp->num_parts; ++i) {
pulp->part_sizes[i] = 0;
pulp->part_edge_sizes[i] = 0;
pulp->part_cut_sizes[i] = 0;
}
pulp->cut_size = 0;
pulp->max_cut = 0;
for (uint64_t i = 0; i < g->n_local; ++i) {
uint64_t vert_index = i;
int32_t part = pulp->local_parts[vert_index];
++pulp->part_sizes[part];
uint64_t out_degree = out_degree(g, vert_index);
uint64_t* outs = out_vertices(g, vert_index);
pulp->part_edge_sizes[part] += (int64_t)out_degree;
for (uint64_t j = 0; j < out_degree; ++j) {
uint64_t out_index = outs[j];
int32_t part_out = pulp->local_parts[out_index];
if (part_out != part) {
++pulp->part_cut_sizes[part];
++pulp->cut_size;
}
}
}
MPI_Allreduce(MPI_IN_PLACE, pulp->part_sizes, pulp->num_parts, MPI_INT64_T,
MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, pulp->part_edge_sizes, pulp->num_parts,
MPI_INT64_T, MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, pulp->part_cut_sizes, pulp->num_parts,
MPI_INT64_T, MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, &pulp->cut_size, 1, MPI_INT64_T, MPI_SUM,
MPI_COMM_WORLD);
pulp->cut_size /= 2;
uint64_t global_ghost = g->n_ghost;
uint64_t max_ghost = 0;
MPI_Allreduce(&global_ghost, &max_ghost, 1, MPI_UINT64_T, MPI_MAX,
MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, &global_ghost, 1, MPI_UINT64_T, MPI_SUM,
MPI_COMM_WORLD);
double ghost_balance =
(double)max_ghost / ((double)global_ghost / (double)pulp->num_parts);
int64_t max_v_size = 0;
int32_t max_v_part = -1;
int64_t max_e_size = 0;
int32_t max_e_part = -1;
int64_t max_c_size = 0;
int32_t max_c_part = -1;
for (int32_t i = 0; i < pulp->num_parts; ++i) {
if (max_v_size < pulp->part_sizes[i]) {
max_v_size = pulp->part_sizes[i];
max_v_part = i;
}
if (max_e_size < pulp->part_edge_sizes[i]) {
max_e_size = pulp->part_edge_sizes[i];
max_e_part = i;
}
if (max_c_size < pulp->part_cut_sizes[i]) {
max_c_size = pulp->part_cut_sizes[i];
max_c_part = i;
}
}
pulp->max_v = (double)max_v_size / ((double)g->n / (double)pulp->num_parts);
pulp->max_e =
(double)max_e_size / ((double)g->m * 2.0 / (double)pulp->num_parts);
pulp->max_c =
(double)max_c_size / ((double)pulp->cut_size / (double)pulp->num_parts);
pulp->max_cut = max_c_size;
if (procid == 0) {
printf("---------------------------------------------------------\n");
printf(
"EdgeCut: %li, MaxPartCut: %li\nVertexBalance: %2.3lf (%d, %li), "
"EdgeBalance: %2.3lf (%d, %li)\nCutBalance: %2.3lf (%d, %li), "
"GhostBalance: %2.3lf (%li)\n",
pulp->cut_size, pulp->max_cut, pulp->max_v, max_v_part, max_v_size,
pulp->max_e, max_e_part, max_e_size, pulp->max_c, max_c_part,
max_c_size, ghost_balance, max_ghost);
printf("---------------------------------------------------------\n");
for (int32_t i = 0; i < pulp->num_parts; ++i)
printf("Part: %d, VertSize: %li, EdgeSize: %li, Cut: %li\n", i,
pulp->part_sizes[i], pulp->part_edge_sizes[i],
pulp->part_cut_sizes[i]);
printf("---------------------------------------------------------\n");
}
return 0;
}
int part_eval(dist_graph_t* g, int32_t* parts, int32_t num_parts) {
pulp_data_t pulp;
init_pulp_data(g, &pulp, num_parts);
memcpy(parts, pulp.local_parts, g->n_local * sizeof(int32_t));
for (int32_t i = 0; i < pulp.num_parts; ++i) {
pulp.part_sizes[i] = 0;
pulp.part_edge_sizes[i] = 0;
pulp.part_cut_sizes[i] = 0;
}
pulp.cut_size = 0;
pulp.max_cut = 0;
for (uint64_t i = 0; i < g->n_local; ++i) {
uint64_t vert_index = i;
int32_t part = pulp.local_parts[vert_index];
++pulp.part_sizes[part];
uint64_t out_degree = out_degree(g, vert_index);
uint64_t* outs = out_vertices(g, vert_index);
pulp.part_edge_sizes[part] += (int64_t)out_degree;
for (uint64_t j = 0; j < out_degree; ++j) {
uint64_t out_index = outs[j];
int32_t part_out = pulp.local_parts[out_index];
if (part_out != part) {
++pulp.part_cut_sizes[part];
++pulp.cut_size;
}
}
}
MPI_Allreduce(MPI_IN_PLACE, pulp.part_sizes, pulp.num_parts, MPI_INT64_T,
MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, pulp.part_edge_sizes, pulp.num_parts, MPI_INT64_T,
MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, pulp.part_cut_sizes, pulp.num_parts, MPI_INT64_T,
MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, &pulp.cut_size, 1, MPI_INT64_T, MPI_SUM,
MPI_COMM_WORLD);
pulp.cut_size /= 2;
uint64_t global_ghost = g->n_ghost;
uint64_t max_ghost = 0;
MPI_Allreduce(&global_ghost, &max_ghost, 1, MPI_UINT64_T, MPI_MAX,
MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, &global_ghost, 1, MPI_UINT64_T, MPI_SUM,
MPI_COMM_WORLD);
double ghost_balance =
(double)max_ghost / ((double)global_ghost / (double)pulp.num_parts);
int64_t max_v_size = 0;
int32_t max_v_part = -1;
int64_t max_e_size = 0;
int32_t max_e_part = -1;
int64_t max_c_size = 0;
int32_t max_c_part = -1;
for (int32_t i = 0; i < pulp.num_parts; ++i) {
if (max_v_size < pulp.part_sizes[i]) {
max_v_size = pulp.part_sizes[i];
max_v_part = i;
}
if (max_e_size < pulp.part_edge_sizes[i]) {
max_e_size = pulp.part_edge_sizes[i];
max_e_part = i;
}
if (max_c_size < pulp.part_cut_sizes[i]) {
max_c_size = pulp.part_cut_sizes[i];
max_c_part = i;
}
}
pulp.max_v = (double)max_v_size / ((double)g->n / (double)pulp.num_parts);
pulp.max_e =
(double)max_e_size / ((double)g->m * 2.0 / (double)pulp.num_parts);
pulp.max_c =
(double)max_c_size / ((double)pulp.cut_size / (double)pulp.num_parts);
pulp.max_cut = max_c_size;
if (procid == 0) {
printf(
"EVAL ec: %li, vb: %2.3lf (%d, %li), eb: %2.3lf (%d, %li), cb: %2.3lf "
"(%d, %li), gb: %2.3lf (%li)\n",
pulp.cut_size, pulp.max_v, max_v_part, max_v_size, pulp.max_e,
max_e_part, max_e_size, pulp.max_c, max_c_part, max_c_size,
ghost_balance, max_ghost);
for (int32_t i = 0; i < pulp.num_parts; ++i)
printf("p: %d, v: %li, e: %li, cut: %li\n", i, pulp.part_sizes[i],
pulp.part_edge_sizes[i], pulp.part_cut_sizes[i]);
}
clear_pulp_data(&pulp);
return 0;
}
int part_eval_weighted(dist_graph_t* g, pulp_data_t* pulp) {
bool has_vwgts = (g->vertex_weights != NULL);
bool has_ewgts = (g->edge_weights != NULL);
for (int32_t i = 0; i < pulp->num_parts; ++i) {
pulp->part_sizes[i] = 0;
pulp->part_edge_sizes[i] = 0;
pulp->part_cut_sizes[i] = 0;
}
pulp->cut_size = 0;
pulp->max_cut = 0;
for (uint64_t i = 0; i < g->n_local; ++i) {
uint64_t vert_index = i;
int32_t part = pulp->local_parts[vert_index];
if (has_vwgts)
pulp->part_sizes[part] += g->vertex_weights[vert_index];
else
++pulp->part_sizes[part];
uint64_t out_degree = out_degree(g, vert_index);
uint64_t* outs = out_vertices(g, vert_index);
int32_t* weights = out_weights(g, vert_index);
pulp->part_edge_sizes[part] += (int64_t)out_degree;
for (uint64_t j = 0; j < out_degree; ++j) {
uint64_t out_index = outs[j];
int32_t part_out = pulp->local_parts[out_index];
if (part_out != part) {
if (has_ewgts) {
pulp->part_cut_sizes[part] += weights[j];
pulp->cut_size += weights[j];
} else {
++pulp->part_cut_sizes[part];
++pulp->cut_size;
}
}
}
}
MPI_Allreduce(MPI_IN_PLACE, pulp->part_sizes, pulp->num_parts, MPI_INT64_T,
MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, pulp->part_edge_sizes, pulp->num_parts,
MPI_INT64_T, MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, pulp->part_cut_sizes, pulp->num_parts,
MPI_INT64_T, MPI_SUM, MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, &pulp->cut_size, 1, MPI_INT64_T, MPI_SUM,
MPI_COMM_WORLD);
pulp->cut_size /= 2;
int64_t part_size_sum = 0;
int64_t part_edge_size_sum = 0;
int64_t part_cut_size_sum = 0;
for (int32_t i = 0; i < pulp->num_parts; ++i) {
part_size_sum += pulp->part_sizes[i];
part_edge_size_sum += pulp->part_edge_sizes[i];
part_cut_size_sum += pulp->part_cut_sizes[i];
if (pulp->part_cut_sizes[i] > pulp->max_cut)
pulp->max_cut = pulp->part_cut_sizes[i];
}
uint64_t global_ghost = g->n_ghost;
uint64_t max_ghost = 0;
MPI_Allreduce(&global_ghost, &max_ghost, 1, MPI_UINT64_T, MPI_MAX,
MPI_COMM_WORLD);
MPI_Allreduce(MPI_IN_PLACE, &global_ghost, 1, MPI_UINT64_T, MPI_SUM,
MPI_COMM_WORLD);
double ghost_balance =
(double)max_ghost / ((double)global_ghost / (double)pulp->num_parts);
int64_t max_v_size = 0;
int32_t max_v_part = -1;
int64_t max_e_size = 0;
int32_t max_e_part = -1;
int64_t max_c_size = 0;
int32_t max_c_part = -1;
for (int32_t i = 0; i < pulp->num_parts; ++i) {
if (max_v_size < pulp->part_sizes[i]) {
max_v_size = pulp->part_sizes[i];
max_v_part = i;
}
if (max_e_size < pulp->part_edge_sizes[i]) {
max_e_size = pulp->part_edge_sizes[i];
max_e_part = i;
}
if (max_c_size < pulp->part_cut_sizes[i]) {
max_c_size = pulp->part_cut_sizes[i];
max_c_part = i;
}
}
pulp->max_v =
(double)max_v_size / ((double)part_size_sum / (double)pulp->num_parts);
pulp->max_e =
(double)max_e_size / ((double)g->m * 2.0 / (double)pulp->num_parts);
pulp->max_c =
(double)max_c_size / ((double)pulp->cut_size / (double)pulp->num_parts);
pulp->max_cut = max_c_size;
if (procid == 0) {
printf(
"EVAL ec: %li, vb: %2.3lf (%d, %li), eb: %2.3lf (%d, %li), cb: %2.3lf "
"(%d, %li), gb: %2.3lf (%li)\n",
pulp->cut_size, pulp->max_v, max_v_part, max_v_size, pulp->max_e,
max_e_part, max_e_size, pulp->max_c, max_c_part, max_c_size,
ghost_balance, max_ghost);
for (int32_t i = 0; i < pulp->num_parts; ++i)
printf("p: %d, v: %li, e: %li, cut: %li\n", i, pulp->part_sizes[i],
pulp->part_edge_sizes[i], pulp->part_cut_sizes[i]);
}
return 0;
}
int output_parts(const char* filename, dist_graph_t* g, int32_t* parts) {
output_parts(filename, g, parts, false);
return 0;
}
int output_parts(const char* filename, dist_graph_t* g, int32_t* parts,
bool offset_vids) {
if (verbose) printf("Task %d writing parts to %s\n", procid, filename);
int32_t* global_parts = (int32_t*)malloc(g->n * sizeof(int32_t));
#pragma omp parallel for
for (uint64_t i = 0; i < g->n; ++i) global_parts[i] = -1;
#pragma omp parallel for
for (uint64_t i = 0; i < g->n_local; ++i)
if (offset_vids) {
uint64_t task_id = g->local_unmap[i] - g->n_offset;
uint64_t task = (uint64_t)procid;
uint64_t global_id = task_id * (uint64_t)nprocs + task;
if (global_id < g->n) global_parts[global_id] = parts[i];
} else
global_parts[g->local_unmap[i]] = parts[i];
if (procid == 0)
MPI_Reduce(MPI_IN_PLACE, global_parts, (int32_t)g->n, MPI_INT32_T, MPI_MAX,
0, MPI_COMM_WORLD);
else
MPI_Reduce(global_parts, global_parts, (int32_t)g->n, MPI_INT32_T, MPI_MAX,
0, MPI_COMM_WORLD);
if (procid == 0) {
if (debug)
for (uint64_t i = 0; i < g->n; ++i)
if (global_parts[i] == -1) {
printf("Part error: %lu not assigned\n", i);
global_parts[i] = 0;
}
std::ofstream outfile;
outfile.open(filename);
for (uint64_t i = 0; i < g->n; ++i) outfile << global_parts[i] << std::endl;
outfile.close();
}
free(global_parts);
if (verbose) printf("Task %d done writing parts\n", procid);
return 0;
}
int read_parts(const char* filename, dist_graph_t* g, pulp_data_t* pulp,
bool offset_vids) {
if (verbose) printf("Task %d reading in parts from %s\n", procid, filename);
int32_t* global_parts = (int32_t*)malloc(g->n * sizeof(int32_t));
#pragma omp parallel for
for (uint64_t i = 0; i < g->n; ++i) global_parts[i] = -1;
#pragma omp parallel for
for (uint64_t i = 0; i < g->n_total; ++i) pulp->local_parts[i] = -1;
if (procid == 0) {
std::ifstream outfile;
outfile.open(filename);
for (uint64_t i = 0; i < g->n; ++i) outfile >> global_parts[i];
outfile.close();
if (debug)
for (uint64_t i = 0; i < g->n; ++i)
if (global_parts[i] == -1) {
printf("Part error: %lu not assigned\n", i);
global_parts[i] = 0;
}
}
MPI_Bcast(global_parts, (int32_t)g->n, MPI_INT32_T, 0, MPI_COMM_WORLD);
if (offset_vids) {
#pragma omp parallel for
for (uint64_t i = 0; i < g->n_local; ++i) {
uint64_t task = (uint64_t)procid;
uint64_t task_id = g->local_unmap[i] - g->n_offset;
uint64_t global_id = task_id * (uint64_t)nprocs + task;
if (global_id < g->n) pulp->local_parts[i] = global_parts[global_id];
}
#pragma omp parallel for
for (uint64_t i = 0; i < g->n_ghost; ++i) {
uint64_t task = (uint64_t)g->ghost_tasks[i];
uint64_t task_id =
g->ghost_unmap[i] - task * (g->n / (uint64_t)nprocs + 1);
uint64_t global_id = task_id * (uint64_t)nprocs + task;
if (global_id < g->n)
pulp->local_parts[i + g->n_local] = global_parts[global_id];
}
if (debug)
for (uint64_t i = 0; i < g->n_total; ++i)
if (pulp->local_parts[i] == -1) {
printf("Part error: %lu not assigned\n", i);
pulp->local_parts[i] = 0;
}
} else {
#pragma omp parallel for
for (uint64_t i = 0; i < g->n_local; ++i)
pulp->local_parts[i] = global_parts[g->local_unmap[i]];
#pragma omp parallel for
for (uint64_t i = 0; i < g->n_ghost; ++i)
pulp->local_parts[i + g->n_local] = global_parts[g->ghost_unmap[i]];
}
free(global_parts);
if (verbose) printf("Task %d done reading in parts\n", procid);
return 0;
}