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Possibly implement "geometric" based jacobian calculation #6

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gdevenyi opened this issue Jun 27, 2019 · 2 comments
Open

Possibly implement "geometric" based jacobian calculation #6

gdevenyi opened this issue Jun 27, 2019 · 2 comments
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enhancement New feature or request

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@gdevenyi
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ANTs has a "geometric" jacobian implementation, which computes the jacobian based on the change in volume of a tetrahedra centered at each voxel.

https://github.com/ANTsX/ANTs/blob/master/Utilities/itkGeometricJacobianDeterminantImageFilter.hxx

https://github.com/ANTsX/ANTs/blob/master/Examples/CreateJacobianDeterminantImage.cxx

@gdevenyi
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@m-pilia
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m-pilia commented Jun 27, 2019

Thanks for the suggestion! I had not seen that paper before, and it seems an interesting approach. In this context it would take some additional effort to implement, however, because the tricky part is to get a good cost function for gradient descent. It is an interesting possibility, however I have little time budget for disptools nowadays, so I am not sure it is something I can tackle in the short term.

@m-pilia m-pilia added the enhancement New feature or request label Jun 27, 2019
@m-pilia m-pilia self-assigned this Oct 31, 2019
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