diff --git a/.github/workflows/parallel_test.yml b/.github/workflows/parallel_test.yml index 507233a71..64332832e 100644 --- a/.github/workflows/parallel_test.yml +++ b/.github/workflows/parallel_test.yml @@ -21,15 +21,15 @@ jobs: - uses: julia-actions/cache@v2 - run: | touch Project.toml - julia --project -O3 --check-bounds=no -e 'import Pkg; Pkg.add(["MPI", "MPIPreferences", "PackageCompiler"]); using MPIPreferences; MPIPreferences.use_jll_binary("OpenMPI_jll")' - julia --project -O3 --check-bounds=no -e 'using MPI; MPI.install_mpiexecjl(; destdir=".")' - julia --project -O3 --check-bounds=no -e 'import Pkg; Pkg.add(["NCDatasets", "Random", "SpecialFunctions", "StatsBase", "Test"]); Pkg.develop(path="moment_kinetics/")' - julia --project -O3 --check-bounds=no -e 'import Pkg; Pkg.precompile()' - julia --project -O3 --check-bounds=no precompile.jl + julia --project -O3 -e 'import Pkg; Pkg.add(["MPI", "MPIPreferences", "PackageCompiler"]); using MPIPreferences; MPIPreferences.use_jll_binary("OpenMPI_jll")' + julia --project -O3 -e 'using MPI; MPI.install_mpiexecjl(; destdir=".")' + julia --project -O3 -e 'import Pkg; Pkg.add(["NCDatasets", "Random", "SpecialFunctions", "StatsBase", "Test"]); Pkg.develop(path="moment_kinetics/")' + julia --project -O3 -e 'import Pkg; Pkg.precompile()' + julia --project -O3 precompile.jl # Need to use openmpi so that we can use `--oversubscribe` to allow using more MPI ranks than physical cores - ./mpiexecjl -np 3 --oversubscribe julia -J moment_kinetics.so --project -O3 --check-bounds=no moment_kinetics/test/runtests.jl --ci --debug 1 - ./mpiexecjl -np 4 --oversubscribe julia -J moment_kinetics.so --project -O3 --check-bounds=no moment_kinetics/test/runtests.jl --ci --debug 1 - ./mpiexecjl -np 2 --oversubscribe julia -J moment_kinetics.so --project -O3 --check-bounds=no moment_kinetics/test/runtests.jl --ci --debug 1 --long + ./mpiexecjl -np 3 --oversubscribe julia -J moment_kinetics.so --project -O3 moment_kinetics/test/runtests.jl --ci --debug 1 + ./mpiexecjl -np 4 --oversubscribe julia -J moment_kinetics.so --project -O3 moment_kinetics/test/runtests.jl --ci --debug 1 + ./mpiexecjl -np 2 --oversubscribe julia -J moment_kinetics.so --project -O3 moment_kinetics/test/runtests.jl --ci --debug 1 --long # Note: MPI.jl's default implementation is mpich, which has a similar option # `--with-device=ch3:sock`, but that needs to be set when compiling mpich. shell: bash @@ -47,13 +47,13 @@ jobs: - uses: julia-actions/cache@v2 - run: | touch Project.toml - julia --project -O3 --check-bounds=no -e 'import Pkg; Pkg.add(["MPI", "MPIPreferences", "PackageCompiler"]); using MPIPreferences; MPIPreferences.use_jll_binary("OpenMPI_jll")' - julia --project -O3 --check-bounds=no -e 'using MPI; MPI.install_mpiexecjl(; destdir=".")' - julia --project -O3 --check-bounds=no -e 'import Pkg; Pkg.add(["NCDatasets", "Random", "SpecialFunctions", "StatsBase", "Test"]); Pkg.develop(path="moment_kinetics/")' - julia --project -O3 --check-bounds=no -e 'import Pkg; Pkg.precompile()' - julia --project -O3 --check-bounds=no precompile.jl + julia --project -O3 -e 'import Pkg; Pkg.add(["MPI", "MPIPreferences", "PackageCompiler"]); using MPIPreferences; MPIPreferences.use_jll_binary("OpenMPI_jll")' + julia --project -O3 -e 'using MPI; MPI.install_mpiexecjl(; destdir=".")' + julia --project -O3 -e 'import Pkg; Pkg.add(["NCDatasets", "Random", "SpecialFunctions", "StatsBase", "Test"]); Pkg.develop(path="moment_kinetics/")' + julia --project -O3 -e 'import Pkg; Pkg.precompile()' + julia --project -O3 precompile.jl # Need to use openmpi so that we can use `--oversubscribe` to allow using more MPI ranks than physical cores - ./mpiexecjl -np 4 --oversubscribe julia -J moment_kinetics.so --project -O3 --check-bounds=no moment_kinetics/test/runtests.jl --ci --debug 1 + ./mpiexecjl -np 4 --oversubscribe julia -J moment_kinetics.so --project -O3 moment_kinetics/test/runtests.jl --ci --debug 1 # Note: MPI.jl's default implementation is mpich, which has a similar option # `--with-device=ch3:sock`, but that needs to be set when compiling mpich. shell: bash