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allCounts.txt
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chr4 18728547 18730748 ENSMUSG00000088500.1|ENSMUST00000157875.1|Gm24419 0.033823 0.096684 0.113048 0.11097 0.024294 0.080294 0.122397 0.208083 0.063284 0.1008 0.110919 0.109829
chr4 115563448 115565698 ENSMUSG00000028712.7|ENSMUST00000141033.2|Cyp4a31;ENSMUSG00000028712.7|ENSMUST00000030486.9|Cyp4a31;ENSMUSG00000028712.7|ENSMUST00000126645.2|Cyp4a31;ENSMUSG00000028712.7|ENSMUST00000030480.3|Cyp4a31 0.06934 0 0.122921 0.0472 0.074663 0.080326 0.1292 0.197681 0.0822 0 0 0.166806
chr7 88447229 88449430 ENSMUSG00000080748.1|ENSMUST00000117390.1|Gm15661 0.095389 0.09867 0.138741 0.119616 0.070314 0.080337 0.088774 0.180736 0.020891 0.0354 0.288548 0.170273
chr13 116153580 116155781 ENSMUSG00000061669.6|ENSMUST00000081679.6|Gm6404 0.092079 0.138589 0.097309 0.21854 0.067396 0.080347 0.111388 0.215674 0.088968 0.206842 0.083095 0.14046
chrX 78906639 78908840 ENSMUSG00000088446.1|ENSMUST00000157821.1|Gm23556 0.01857 0.118727 0 0 0.040222 0.080382 0.193931 0.0477 0.080297 0 0.0879 0.109185
chr9 124121342 124123581 ENSMUSG00000079227.4|ENSMUST00000111442.1|Ccr5;ENSMUSG00000079227.4|ENSMUST00000169553.2|Ccr5;ENSMUSG00000079227.4|ENSMUST00000168179.2|Ccr5;ENSMUSG00000079227.4|ENSMUST00000171499.2|Ccr5 0.059224 0.07709 0.063155 0.1329 0.086016 0.080497 0.107772 0.146097 0.088361 0.100923 0.172535 0.138991
chr9 119148062 119150263 ENSMUSG00000010651.4|ENSMUST00000127952.1|Acaa1b 0.143781 0.284066 0.139168 0.157378 0.110661 0.0805 0.263657 0.286325 0.149907 0.185686 0.0879 0.207222
chr14 32214198 32216399 ENSMUSG00000021911.10|ENSMUST00000167699.1|Parg 0.143892 0.135694 0.093956 0.074002 0.063605 0.08051 0.159649 0.238552 0.10736 0.072435 0.232753 0.225411
chr17 19279121 19281322 ENSMUSG00000093776.1|ENSMUST00000176341.1|Vmn2r-ps120 0 0.1629 0.074776 0.035538 0.054335 0.080529 0.085374 0.0477 0.039583 0.084431 0 0.0482
chr19 13364429 13366630 ENSMUSG00000049015.2|ENSMUST00000054687.2|Olfr1467 0.020151 0.135187 0.088801 0.148998 0.090834 0.080579 0.13244 0.168864 0.090894 0.115808 0 0.240003
chr6 149003714 149005915 ENSMUSG00000082633.1|ENSMUST00000117470.1|Gm15779 0.223897 0.239024 0.190075 0.204867 0.057663 0.0806 0.088125 0.258615 0.1523 0.144402 0.0879 0.204553
chr11 74264235 74266436 ENSMUSG00000081864.2|ENSMUST00000127098.1|Olfr405-ps1 0.064434 0 0.1071 0 0.081466 0.111878 0.066227 0.168 0.075119 0 0 0
chr2 46306135 46308336 ENSMUSG00000088868.1|ENSMUST00000158243.1|Gm23072 0.150226 0.106494 0.090252 0.135755 0.111828 0.111884 0.134562 0.237512 0.033626 0.1008 0 0.192798
chrX 20391508 20393709 ENSMUSG00000082855.1|ENSMUST00000117464.1|Gm14537 0.101995 0.152969 0.199794 0.08761 0.076242 0.111894 0.151479 0.168 0.047747 0.1579 0 0
chr3 57920186 57922387 ENSMUSG00000088570.1|ENSMUST00000157945.1|Gm24531 0.108178 0.204592 0.18967 0.147726 0.156177 0.111912 0.231356 0.183256 0.060187 0.133275 0.147927 0.222845
chr17 63094999 63097200 ENSMUSG00000089586.1|ENSMUST00000158961.1|Gm25348 0.18564 0.186956 0.195375 0.253796 0.09654 0.111923 0.094176 0.219402 0.063514 0.097036 0.178758 0.207342
chr12 72128317 72130518 ENSMUSG00000095382.1|ENSMUST00000179978.1|Gm24466 0.089409 0.264294 0.097262 0.143983 0.08836 0.111927 0.193025 0.184622 0.085789 0.145081 0.165576 0.140845
chr17 37562217 37564418 ENSMUSG00000051611.7|ENSMUST00000173676.1|Olfr112 0.056339 0 0.1383 0.033708 0.062282 0.11194 0.164058 0.127909 0.109848 0.046469 0.142334 0.130972
chr4 99021389 99023663 ENSMUSG00000028556.10|ENSMUST00000124466.2|Dock7;ENSMUSG00000028556.10|ENSMUST00000131386.1|Dock7 0.244674 0.221231 0.129132 0.226023 0.169618 0.11194 0.156738 0.260175 0.120522 0.193469 0.164612 0.212977
chr2 97947678 97949879 ENSMUSG00000082820.3|ENSMUST00000117547.1|Gm13803 0.069827 0.0404 0 0 0.090056 0.111947 0.097869 0.075835 0.064861 0 0 0.061229
chr8 109858247 109860448 ENSMUSG00000031731.11|ENSMUST00000173476.1|Ap1g1 0.183628 0.277457 0.2071 0.17223 0.062822 0.111963 0.148508 0.239929 0.075829 0.098762 0.214624 0.249232
chr1 162935224 162937425 ENSMUSG00000095576.1|ENSMUST00000178465.1|Fmo6 0.101364 0.209284 0.141338 0.113583 0.136127 0.162946 0.132405 0.15544 0 0.237468 0.136509 0.075898
chr8 89185559 89187760 ENSMUSG00000069962.3|ENSMUST00000093326.3|Gm5356 0.225989 0.283855 0.213206 0.247665 0.078795 0.162947 0.155359 0.168612 0.092423 0.103911 0.201912 0.090078
chr11 88972456 88975935 ENSMUSG00000081766.3|ENSMUST00000122062.1|2210409E12Rik;ENSMUSG00000033983.8|ENSMUST00000036649.5|Coil;ENSMUSG00000033983.8|ENSMUST00000107898.3|Coil 1.458518 1.467759 1.1123 1.094517 0.072398 0.162948 0.168668 0.242239 4.107237 6.725885 6.683453 3.769429
chr9 21611575 21613776 ENSMUSG00000088478.1|ENSMUST00000157853.1|Mir1946b 0.354126 0.307698 0.249526 0.254708 0.108079 0.162949 0.156436 0.217534 0.083143 0.164758 0.184616 0.204506
chrX 162940973 162943555 ENSMUSG00000031360.9|ENSMUST00000135094.2|Ctps2;ENSMUSG00000031360.9|ENSMUST00000148199.1|Ctps2 0.117617 0.21738 0.08874 0.116989 0.050848 0.162953 0.157777 0.195467 0.04662 0.097132 0.144784 0.191277
chr1 98549250 98551451 ENSMUSG00000096193.1|ENSMUST00000178484.1|Gm26134 0.105827 0.154733 0.083151 0.02695 0.082095 0.167169 0.128563 0.08245 0.061271 0.212024 0.150504 0.098964
chr8 110938313 110940514 ENSMUSG00000097380.1|ENSMUST00000180679.1|Gm26816 0.381678 0.406026 0.312371 0.209197 0.10465 0.16717 0.107314 0.159347 0.109264 0.121798 0.193827 0.206891
chr10 99420321 99422522 ENSMUSG00000044633.3|ENSMUST00000060657.2|B530045E10Rik 0.124984 0.245291 0.277362 0.249009 0.121546 0.167176 0.107153 0.309255 0.100888 0.069183 0.082291 0.2041
chr19 11228539 11230740 ENSMUSG00000101031.1|ENSMUST00000186228.1|Ms4a12 0.09648 0.120408 0.102343 0.081442 0.140805 0.167178 0.184137 0.208237 0.062624 0.184986 0.071948 0.099422
chrX 51799143 51801433 ENSMUSG00000055780.5|ENSMUST00000069509.3|Usp26;ENSMUSG00000055780.5|ENSMUST00000114869.2|Usp26 1.031952 0.763242 0.493359 0.234438 0.071508 0.167182 0.230826 0.206005 2.525725 2.852504 1.553076 0.591192
chr4 58497402 58499603 ENSMUSG00000038668.9|ENSMUST00000107570.1|Lpar1 0.180215 0.267266 0.165659 0.152602 0.107419 0.167191 0.224125 0.258956 0.045545 0.090562 0 0.28372
chr2 156849755 156852836 ENSMUSG00000062175.8|ENSMUST00000175634.1|Tgif2;ENSMUSG00000062175.8|ENSMUST00000176281.1|Tgif2 0.470849 0.363407 0.219693 0.217087 0.085399 0.167194 0.149862 0.191335 0.087026 0.185131 0.180178 0.195093
chr10 68276725 68278926 ENSMUSG00000019947.9|ENSMUST00000020106.7|Arid5b 0.717709 1.009105 0.92988 0.958405 0.028248 0.167195 0.238958 0.106638 4.769563 7.757263 9.773622 3.656155
chr3 92316504 92318705 ENSMUSG00000050092.2|ENSMUST00000061038.2|Sprr2b 0.155946 0.233834 0.123836 0.211581 0.065629 0.167201 0.117423 0.121855 0.045237 0 0 0.15115
chr6 128934180 128936405 ENSMUSG00000000248.11|ENSMUST00000000254.8|Clec2g;ENSMUSG00000000248.11|ENSMUST00000146925.1|Clec2g 0.072147 0.131725 0.084303 0 0.085648 0.167202 0 0 0.085423 0 0.150707 0
chr6 90589149 90591350 ENSMUSG00000030088.10|ENSMUST00000137669.1|Aldh1l1 0.226293 0.268602 0.189594 0.245733 0.12375 0.167204 0.193443 0.199901 0.068034 0.179767 0.200824 0.167615
chr6 17854783 17856984 ENSMUSG00000029534.12|ENSMUST00000144743.2|St7 0.113632 0.056206 0.229277 0.083656 0.110675 0.167229 0.18776 0.182961 0.091194 0.170816 0.191036 0.186855
chr15 11964075 11969062 ENSMUSG00000099349.1|ENSMUST00000191278.1|RP24-105K16.1;ENSMUSG00000099349.1|ENSMUST00000188888.1|RP24-105K16.1;ENSMUSG00000099349.1|ENSMUST00000186347.1|RP24-105K16.1;ENSMUSG00000088803.1|ENSMUST00000158178.1|Gm24074;ENSMUSG00000099349.1|ENSMUST00000190000.1|RP24-105K16.1 0.152237 0.251877 0.218538 0.226262 0.231937 0.167231 0.227785 0.236559 0.138826 0.117517 0.14893 0.187155
chr4 120920023 120922224 ENSMUSG00000028629.4|ENSMUST00000144114.1|Exo5 0.185852 0.15984 0.156863 0.18517 0.102742 0.167232 0.157268 0.185453 0.060088 0.173562 0.189342 0.229841
chr9 91215814 91218015 ENSMUSG00000100568.1|ENSMUST00000186887.1|RP23-186M2.2 0.083204 0.251466 0.12025 0.121866 0.132609 0.167237 0.150656 0.210235 0.103081 0.0354 0.200752 0.180298
chr19 13026326 13028527 ENSMUSG00000094755.1|ENSMUST00000087773.1|Olfr1453 0 0 0.027094 0 0.033929 0.167239 0.075435 0.19911 0.031912 0 0 0.100423
chr7 73445232 73447433 ENSMUSG00000078671.5|ENSMUST00000173785.1|Chd2 0.246624 0.279432 0.154426 0.197026 0.07687 0.167239 0.129337 0.166257 0.095614 0.203481 0.095238 0.165028
chr3 88642225 88645932 ENSMUSG00000028059.9|ENSMUST00000177099.1|Arhgef2;ENSMUSG00000028059.9|ENSMUST00000176272.1|Arhgef2 0.693055 0.615118 0.300744 0.255307 0.107568 0.167245 0.168441 0.212003 0.625861 0.220338 0.118407 0.219553
chr7 35119092 35121293 ENSMUSG00000034957.9|ENSMUST00000042985.9|Cebpa 0.393816 0.536344 0.308356 0.363906 0.822492 4.50912 6.050512 4.474802 3.369673 5.629809 4.023549 1.593522
chr1 74949441 74951872 ENSMUSG00000006538.10|ENSMUST00000189364.1|Ihh;ENSMUSG00000006538.10|ENSMUST00000164097.2|Ihh 0.52248 0.415587 0.24408 0.259817 0.991465 4.517638 7.855838 4.999674 1.425747 2.434821 1.787405 0.743526
chr17 39844873 39849027 ENSMUSG00000097971.2|ENSMUST00000182520.1|Gm26917;ENSMUSG00000098178.1|ENSMUST00000182010.1|Yam1;ENSMUSG00000045999.8|ENSMUST00000062783.8|AY036118 0.574284 1.905622 0.783482 0.345239 0.253031 4.525437 12.628251 12.696693 0.592316 1.564997 1.0139 0.721744
chr6 112487807 112490008 ENSMUSG00000049112.8|ENSMUST00000053306.6|Oxtr 0.371628 0.831391 0.389066 0.568231 1.049291 4.542772 6.908971 3.944355 1.462278 2.230777 1.537191 1.026395
chr15 98789656 98791857 ENSMUSG00000022997.9|ENSMUST00000023734.7|Wnt1 0.390574 0.418316 0.240852 0.281492 1.151347 4.60438 7.28978 4.868873 0.96022 0.863621 0.399329 0.260346
chr6 85511588 85513789 ENSMUSG00000071341.3|ENSMUST00000095759.3|Egr4 0.58033 0.557822 0.45589 0.39973 1.149301 4.626026 8.22798 5.719879 6.755615 7.882737 6.455548 2.132196
chr2 33638479 33640711 ENSMUSG00000038765.8|ENSMUST00000176067.1|Lmx1b;ENSMUSG00000038765.8|ENSMUST00000041730.5|Lmx1b 0.549616 0.542736 0.425534 0.219716 1.001885 4.641261 7.545247 4.419362 1.107902 1.234152 0.905757 0.404156
chr11 75166145 75169719 ENSMUSG00000043099.4|ENSMUST00000131720.1|Hic1;ENSMUSG00000043099.4|ENSMUST00000055619.4|Hic1 0.787287 0.618811 0.469823 0.437175 1.094497 4.674624 7.295654 4.484368 3.055753 2.935195 1.490812 0.799016
chr8 121115970 121118171 ENSMUSG00000046714.7|ENSMUST00000054691.7|Foxc2 0.421398 0.521633 0.33436 0.300068 1.077911 4.687578 6.977476 5.108148 2.420336 4.299376 3.596502 1.101053
chr14 79769311 79771512 ENSMUSG00000036422.5|ENSMUST00000039568.5|Pcdh8 0.516125 0.64149 0.742715 0.720019 1.165489 4.790998 7.638561 3.443416 3.288934 3.81134 8.58413 4.0575
chr11 3191406 3194463 ENSMUSG00000023764.13|ENSMUST00000081318.7|Sfi1;ENSMUSG00000023764.13|ENSMUST00000144359.2|Sfi1;ENSMUSG00000023764.13|ENSMUST00000138126.2|Sfi1;ENSMUSG00000023764.13|ENSMUST00000142315.2|Sfi1;ENSMUSG00000023764.13|ENSMUST00000118627.1|Sfi1;ENSMUSG00000023764.13|ENSMUST00000144778.2|Sfi1;ENSMUSG00000023764.13|ENSMUST00000132893.2|Sfi1;ENSMUSG00000023764.13|ENSMUST00000066391.8|Sfi1;ENSMUSG00000086049.1|ENSMUST00000146218.1|Gm12735 3.571869 10.650687 8.369513 8.328901 1.820002 4.808647 5.493115 2.655176 8.293934 23.580817 29.47095 17.193082
chr12 80758205 80760741 ENSMUSG00000097575.1|ENSMUST00000181092.1|Gm26796;ENSMUSG00000062961.6|ENSMUST00000073251.6|Ccdc177 0.744354 1.18037 1.621228 2.03937 1.175856 4.938117 6.240718 2.574262 4.171936 4.963459 5.239865 2.943708
chr17 34670334 34672535 ENSMUSG00000033327.11|ENSMUST00000168533.2|Tnxb;ENSMUSG00000033327.11|ENSMUST00000087399.4|Tnxb 0.324343 0.622829 0.548637 0.583748 1.080337 4.970768 7.297499 4.776237 1.527821 3.309405 3.119015 1.196714
chr2 118701962 118704163 ENSMUSG00000078137.1|ENSMUST00000104937.1|Ankrd63 0.553715 0.565988 0.326578 0.315756 1.563033 5.017758 9.23382 5.846849 3.573053 4.891596 2.624412 0.996238
chr6 115993004 115995205 ENSMUSG00000030123.10|ENSMUST00000015511.9|Plxnd1 0.430442 0.707099 0.50121 0.291487 1.129977 5.054439 7.695998 4.700076 3.103895 4.388345 3.908972 1.385307
chr11 59134374 59136602 ENSMUSG00000061462.10|ENSMUST00000047441.8|Obscn;ENSMUSG00000061462.10|ENSMUST00000052872.8|Obscn;ENSMUSG00000061462.10|ENSMUST00000020732.5|Obscn 0.726022 0.972814 0.525703 0.355835 1.368068 5.200176 8.428174 4.57941 2.493011 2.883537 2.359908 0.955143
chr5 75075263 75077601 ENSMUSG00000035946.6|ENSMUST00000160104.1|Gsx2;ENSMUSG00000035946.6|ENSMUST00000040477.3|Gsx2 0.406131 0.556991 0.341391 0.360041 1.107497 3.596624 6.172969 4.437975 1.559207 2.476388 1.888847 0.761166
chr6 88198463 88200664 ENSMUSG00000015053.9|ENSMUST00000015197.7|Gata2 0.424417 0.477932 0.389953 0.321265 1.013038 3.611448 5.972012 4.262166 1.706062 2.730473 2.03873 0.66594
chr15 85576069 85578270 ENSMUSG00000022382.9|ENSMUST00000109424.2|Wnt7b 0.353996 0.515654 0.258634 0.366757 0.968515 3.612563 6.099162 3.517756 1.624343 2.573243 1.757664 0.968663
chr19 44759714 44761915 ENSMUSG00000004231.10|ENSMUST00000173346.3|Pax2 0.382194 0.289389 0.254516 0.278757 0.845223 3.621856 6.591069 4.637326 0.648774 0.715012 0.614843 0.281996
chr11 35796883 35799084 ENSMUSG00000051062.6|ENSMUST00000160726.3|Fbll1 0.299985 0.479935 0.303493 0.489822 0.92036 3.624117 5.215429 2.217926 2.3235 3.671948 4.362503 2.920812
chr5 147305269 147307470 ENSMUSG00000029646.3|ENSMUST00000031650.3|Cdx2 0.665375 0.624869 0.3373 0.225217 0.895513 3.630637 6.999769 4.744953 2.856889 2.967539 1.80501 0.398571
chr5 111417161 111419442 ENSMUSG00000070576.4|ENSMUST00000138784.1|Mn1;ENSMUSG00000070576.4|ENSMUST00000094463.4|Mn1 0.687551 1.117668 0.887599 1.060051 1.090824 3.631866 5.292052 2.020924 3.635748 7.805484 8.758863 5.21724
chr9 14750121 14752322 ENSMUSG00000049307.5|ENSMUST00000061498.5|Fut4 0.689082 1.047263 0.589807 0.61365 1.062898 3.636909 5.623451 2.909754 2.750185 4.841887 4.295321 2.231599
chr11 95119918 95122119 ENSMUSG00000001510.8|ENSMUST00000092768.6|Dlx3 0.50153 0.46347 0.313108 0.288969 1.002004 3.65664 6.284708 4.275491 1.55058 2.151332 1.592457 0.753892
chr15 102936556 102938757 ENSMUSG00000050328.2|ENSMUST00000055562.2|Hoxc12 0.33251 0.399956 0.214517 0.187785 1.004857 3.660932 6.014217 3.798456 1.254393 0.934175 0.451817 0.194149
chr17 56510482 56512683 ENSMUSG00000044526.2|ENSMUST00000052211.2|Znrf4 1.224921 3.22591 2.526669 1.320279 1.267749 3.661652 5.55425 3.125765 2.209149 2.801367 1.807471 0.540537
chr9 95404721 95406922 ENSMUSG00000033350.7|ENSMUST00000036267.7|Chst2 0.508435 0.888673 0.677753 0.601927 1.131948 3.661943 3.386879 0.911797 4.250138 8.054535 9.584648 4.783847
chr7 141291805 141294006 ENSMUSG00000025496.4|ENSMUST00000026569.4|Drd4 0.395625 0.751119 0.461849 0.454517 1.037792 3.664589 5.960097 3.642731 2.148445 3.311323 2.668015 1.029607
chr5 35278365 35280566 ENSMUSG00000045318.5|ENSMUST00000049545.5|Adra2c 0.387197 0.53375 0.380262 0.337818 0.806296 3.669284 4.726746 2.938959 3.306658 5.760481 4.518035 2.427614
chr3 87998355 88000556 ENSMUSG00000004892.8|ENSMUST00000090971.5|Bcan 0.500255 0.427243 0.312647 0.312737 0.988699 3.680705 6.315762 4.086818 3.838078 6.402791 6.27617 2.129408
chr6 67533821 67536022 ENSMUSG00000051397.4|ENSMUST00000058178.4|Tacstd2 0.363007 0.445643 0.255916 0.214048 1.073036 3.681869 6.256041 3.622653 2.365803 3.12603 2.6537 1.611743
chr8 124792818 124795092 ENSMUSG00000036913.9|ENSMUST00000167588.2|Trim67;ENSMUSG00000036913.9|ENSMUST00000041106.7|Trim67 0.644031 1.453135 0.974937 1.852141 1.256639 3.700376 5.585578 2.696447 5.54833 8.96859 8.737983 5.696743
chr7 4993339 4996358 ENSMUSG00000051550.10|ENSMUST00000162731.1|Zfp579;ENSMUSG00000051550.10|ENSMUST00000160808.1|Zfp579;ENSMUSG00000051550.10|ENSMUST00000159754.1|Zfp579;ENSMUSG00000051550.10|ENSMUST00000162502.1|Zfp579;ENSMUSG00000051550.10|ENSMUST00000108572.1|Zfp579;ENSMUSG00000051550.10|ENSMUST00000160225.1|Zfp579 0.439045 0.886824 0.583856 0.718237 1.073165 3.704378 5.188451 2.275294 3.095814 4.910327 5.135027 2.583728
chr11 119077372 119079573 ENSMUSG00000097614.1|ENSMUST00000181285.1|Gm26508 0.388898 0.439766 0.374113 0.352947 0.352081 1.208669 1.427583 0.674942 0.441431 0.55855 0.521775 0.268942
chr13 94172609 94175992 ENSMUSG00000045312.6|ENSMUST00000118195.1|Lhfpl2;ENSMUSG00000045312.6|ENSMUST00000131595.1|Lhfpl2;ENSMUSG00000045312.6|ENSMUST00000121618.1|Lhfpl2 0.427543 0.612832 0.532995 0.664261 0.527355 1.208724 1.578882 0.984455 2.228369 2.839451 2.631079 1.334326