v9.0.1

Release to activate Zenodo integration. No code changes.

Full Changelog: v9.0.0...v9.0.1

v9.0.0

What's Changed

• Authenticate the user if accessing GCS by @alimanfoo in #513
• Add support for Python 3.12, drop support for Python 3.8 by @alimanfoo in #514
• Detect permission error by @alimanfoo in #517
• Update support mailing address by @ahernank in #520

Full Changelog: v8.8.0...v9.0.0

v8.8.0

What's Changed

• Implement diplotype clustering, refactor haplotype clustering, and fix random_region_str() by @sanjaynagi in #507

Full Changelog: v8.7.0...v8.8.0

v8.7.0

What's Changed

• Docs improvements by @alimanfoo in #502
• Refactor H12 and H1X by @alimanfoo in #503
• Add ENA run accessions function by @ahernank in #496
• Add new discordant read calls version by @ahernank in #506
• Access cohort group data by @ahernank in #436

Full Changelog: v8.6.0...v8.7.0

v8.6.0

What's Changed

• Refactor Fst functions by @alimanfoo in #497
• Reduce memory usage when accessing SNP calls with site_class parameter by @alimanfoo in #501
• Add the correct nomenclature for genes in anopheles.py to enable CNVs for Af by @jonbrenas in #500

Full Changelog: v8.5.0...v8.6.0

v8.5.0

What's Changed

• Maintenance 2024-01-08 by @alimanfoo in #494
• Refactor G123 by @alimanfoo in #495

Full Changelog: v8.4.0...v8.5.0

v8.4.0

What's Changed

• Improve G123 and H12 performance by @alimanfoo in #493

Full Changelog: v8.3.0...v8.4.0

v8.3.0

What's Changed

• Refactor Anopheles IGV by @alimanfoo in #483
• Misc maintenance 2023-12-19 by @alimanfoo in #487
• Refactor handling of virtual contigs by @alimanfoo in #489
• Refactor SNP frequencies by @alimanfoo in #490

Full Changelog: v8.2.0...v8.3.0

v8.2.0

What's Changed

• Anopheles refactor PCA functions by @alimanfoo in #481

Full Changelog: v8.1.0...v8.2.0

v8.1.0

What's Changed

• Misc bug fixes by @alimanfoo in #480

Full Changelog: v8.0.1...v8.1.0