diff --git a/emmet-core/requirements/ubuntu-latest_py3.11.txt b/emmet-core/requirements/ubuntu-latest_py3.11.txt
index be9d51066..6b99cc4ec 100644
--- a/emmet-core/requirements/ubuntu-latest_py3.11.txt
+++ b/emmet-core/requirements/ubuntu-latest_py3.11.txt
@@ -44,7 +44,7 @@ numpy==1.26.4
     #   pymatgen
     #   scipy
     #   spglib
-packaging==24.1
+packaging==24.2
     # via
     #   matplotlib
     #   plotly
@@ -104,7 +104,7 @@ tabulate==0.9.0
     # via pymatgen
 tenacity==9.0.0
     # via plotly
-tqdm==4.66.6
+tqdm==4.67.0
     # via pymatgen
 typing-extensions==4.12.2
     # via
diff --git a/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt b/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt
index 03cdf7846..1d0302e06 100644
--- a/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt
+++ b/emmet-core/requirements/ubuntu-latest_py3.11_extras.txt
@@ -28,9 +28,9 @@ attrs==24.2.0
     #   referencing
 bcrypt==4.2.0
     # via paramiko
-boto3==1.35.54
+boto3==1.35.57
     # via maggma
-botocore==1.35.54
+botocore==1.35.57
     # via
     #   boto3
     #   s3transfer
@@ -110,7 +110,7 @@ h5py==3.12.1
     # via phonopy
 htmlmin2==0.1.13
     # via mkdocs-minify-plugin
-identify==2.6.1
+identify==2.6.2
     # via pre-commit
 idna==3.10
     # via
@@ -231,7 +231,7 @@ mkdocs-material-extensions==1.3.1
     #   mkdocs-material
 mkdocs-minify-plugin==0.8.0
     # via emmet-core (setup.py)
-mkdocstrings[python]==0.26.2
+mkdocstrings[python]==0.27.0
     # via
     #   emmet-core (setup.py)
     #   mkdocstrings-python
@@ -321,6 +321,7 @@ numpy==1.26.4
     #   solvation-analysis
     #   spglib
     #   statsmodels
+    #   symfc
     #   tifffile
     #   torchmetrics
 nvidia-cublas-cu12==12.4.5.8
@@ -359,7 +360,7 @@ nvidia-nvtx-cu12==12.4.127
     # via torch
 orjson==3.10.11
     # via maggma
-packaging==24.1
+packaging==24.2
     # via
     #   lazy-loader
     #   lightning
@@ -390,7 +391,7 @@ pathspec==0.12.1
     # via mkdocs
 patsy==0.5.6
     # via statsmodels
-phonopy==2.29.1
+phonopy==2.30.0
     # via matcalc
 pillow==11.0.0
     # via
@@ -523,7 +524,7 @@ pyyaml-env-tag==0.1
     # via mkdocs
 pyzmq==26.2.0
     # via maggma
-rdkit==2024.3.5
+rdkit==2024.3.6
     # via solvation-analysis
 referencing==0.35.1
     # via
@@ -538,7 +539,7 @@ requests==2.32.3
     #   torchdata
 robocrys==0.2.10
     # via emmet-core (setup.py)
-rpds-py==0.20.1
+rpds-py==0.21.0
     # via
     #   jsonschema
     #   referencing
@@ -570,6 +571,7 @@ scipy==1.14.1
     #   scikit-learn
     #   solvation-analysis
     #   statsmodels
+    #   symfc
 seaborn==0.13.2
     # via pymatgen-analysis-diffusion
 seekpath==2.1.0
@@ -595,10 +597,13 @@ spglib==2.5.0
     #   pymatgen
     #   robocrys
     #   seekpath
+    #   symfc
 sshtunnel==0.4.0
     # via maggma
 statsmodels==0.14.4
     # via solvation-analysis
+symfc==1.1.5
+    # via phonopy
 sympy==1.13.1
     # via
     #   matminer
@@ -626,13 +631,13 @@ torchdata==0.7.1
     # via
     #   dgl
     #   matgl
-torchmetrics==1.5.1
+torchmetrics==1.5.2
     # via
     #   lightning
     #   pytorch-lightning
 tornado==6.4.1
     # via livereload
-tqdm==4.66.6
+tqdm==4.67.0
     # via
     #   dgl
     #   lightning
@@ -647,7 +652,7 @@ typeguard==4.4.1
     # via inflect
 types-requests==2.32.0.20241016
     # via emmet-core (setup.py)
-types-setuptools==75.3.0.20241105
+types-setuptools==75.3.0.20241107
     # via emmet-core (setup.py)
 typing-extensions==4.12.2
     # via