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<li><a href="#setup" id="toc-setup" class="nav-link" data-scroll-target="#setup">Setup</a></li>
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<li><a href="#superlinearity-vs-perplexity" id="toc-superlinearity-vs-perplexity" class="nav-link" data-scroll-target="#superlinearity-vs-perplexity">Superlinearity vs perplexity</a></li>
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<li><a href="#sampling-analysis" id="toc-sampling-analysis" class="nav-link" data-scroll-target="#sampling-analysis">Sampling analysis</a></li>
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For <em>The plausibility of sampling as an algorithmic theory of sentence processing</em>, Open Mind, 2023
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<div>
<div class="quarto-title-meta-heading">Author</div>
<div class="quarto-title-meta-contents">
<p>Jacob Louis Hoover </p>
</div>
</div>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">May 15, 2023</p>
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<section id="gam-plots" class="level1">
<h1>GAM plots</h1>
<div class="callout callout-style-default callout-important no-icon callout-titled">
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Dependencies
</div>
<div class="callout-btn-toggle d-inline-block border-0 py-1 ps-1 pe-0 float-end"><i class="callout-toggle"></i></div>
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<ul>
<li><p>external dependencies (R files, will be sourced)</p>
<pre><code>./utils/prepare_data.R
./utils/my_pacf_plot.R</code></pre></li>
<li><p>data files</p>
<pre><code>./data/surprisal_densities.csv
./data/surprisal_means.csv
./data/GAM_predictions/data_to_plot_NEW_var0_gauss_wprev_N200.csv
./data/GAM_predictions/data_to_plot_NEW_var0_gauss_w3prev_N200.csv
./data/GAM_predictions/data_to_plot_NEW_lin0var_wprev_N200.csv
./data/GAM_predictions/data_to_plot_NEW_linear_wprevm_N200.csv
./data/GAM_predictions/data_to_plot_NEW_wprevm_N200.csv
./data/GAM_predictions/data_to_plot_NEW_datasubsetless6_wprevm_N200.csv
./data/GAM_predictions/data_to_plot_NEW_datasubsetless12_wprevm_N200.csv
./data/model-summaries-NEW-linear-wprevm.rds</code></pre></li>
<li><p>model training data</p>
<pre><code>./data/surps_lms.RTs.perword.rds
./data/surps_lms.RTs.rds</code></pre></li>
<li><p>model file</p>
<pre><code>./data/GAM_models/GPT3-davinci.rds</code></pre></li>
</ul>
</div>
</div>
</div>
<div class="cell">
<details open="">
<summary>options</summary>
<div class="sourceCode cell-code" id="cb5"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb5-1"><a href="#cb5-1" aria-hidden="true" tabindex="-1"></a><span class="co"># Where data lives (plot data from GAM fits, etc)</span></span>
<span id="cb5-2"><a href="#cb5-2" aria-hidden="true" tabindex="-1"></a>datadir <span class="ot"><-</span> <span class="st">"./data/"</span></span>
<span id="cb5-3"><a href="#cb5-3" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb5-4"><a href="#cb5-4" aria-hidden="true" tabindex="-1"></a><span class="co"># Where to put generated plots</span></span>
<span id="cb5-5"><a href="#cb5-5" aria-hidden="true" tabindex="-1"></a>figsdir <span class="ot"><-</span> <span class="st">"./figures/"</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<section id="setup" class="level2">
<h2 class="anchored" data-anchor-id="setup">Setup</h2>
<div class="cell">
<details>
<summary>Setup</summary>
<div class="sourceCode cell-code" id="cb6"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb6-1"><a href="#cb6-1" aria-hidden="true" tabindex="-1"></a><span class="co"># knitr::opts_knit$set(root.dir = rprojroot::find_rstudio_root_file())</span></span>
<span id="cb6-2"><a href="#cb6-2" aria-hidden="true" tabindex="-1"></a><span class="fu">library</span>(dplyr)</span>
<span id="cb6-3"><a href="#cb6-3" aria-hidden="true" tabindex="-1"></a><span class="fu">library</span>(magrittr)</span>
<span id="cb6-4"><a href="#cb6-4" aria-hidden="true" tabindex="-1"></a><span class="fu">library</span>(stringr)</span>
<span id="cb6-5"><a href="#cb6-5" aria-hidden="true" tabindex="-1"></a><span class="fu">library</span>(ggplot2)</span>
<span id="cb6-6"><a href="#cb6-6" aria-hidden="true" tabindex="-1"></a><span class="fu">library</span>(patchwork)</span>
<span id="cb6-7"><a href="#cb6-7" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb6-8"><a href="#cb6-8" aria-hidden="true" tabindex="-1"></a><span class="fu">theme_set</span>(<span class="fu">theme_minimal</span>())</span>
<span id="cb6-9"><a href="#cb6-9" aria-hidden="true" tabindex="-1"></a><span class="fu">theme_update</span>(<span class="at">plot.title.position =</span> <span class="st">"plot"</span>)</span>
<span id="cb6-10"><a href="#cb6-10" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb6-11"><a href="#cb6-11" aria-hidden="true" tabindex="-1"></a><span class="do">## Names</span></span>
<span id="cb6-12"><a href="#cb6-12" aria-hidden="true" tabindex="-1"></a>context_len_labs <span class="ot"><-</span> <span class="fu">c</span>(</span>
<span id="cb6-13"><a href="#cb6-13" aria-hidden="true" tabindex="-1"></a> <span class="at">max =</span> <span class="st">"maximum"</span>,</span>
<span id="cb6-14"><a href="#cb6-14" aria-hidden="true" tabindex="-1"></a> <span class="st">`</span><span class="at">80</span><span class="st">`</span> <span class="ot">=</span> <span class="st">"80 words"</span>,</span>
<span id="cb6-15"><a href="#cb6-15" aria-hidden="true" tabindex="-1"></a> <span class="at">bysent =</span> <span class="st">"within sent."</span></span>
<span id="cb6-16"><a href="#cb6-16" aria-hidden="true" tabindex="-1"></a>)</span>
<span id="cb6-17"><a href="#cb6-17" aria-hidden="true" tabindex="-1"></a>est_type_labs <span class="ot"><-</span> <span class="fu">c</span>(</span>
<span id="cb6-18"><a href="#cb6-18" aria-hidden="true" tabindex="-1"></a> <span class="at">mean =</span> <span class="st">"mean"</span>,</span>
<span id="cb6-19"><a href="#cb6-19" aria-hidden="true" tabindex="-1"></a> <span class="at">var =</span> <span class="st">"variance"</span></span>
<span id="cb6-20"><a href="#cb6-20" aria-hidden="true" tabindex="-1"></a>)</span>
<span id="cb6-21"><a href="#cb6-21" aria-hidden="true" tabindex="-1"></a>term_labs <span class="ot"><-</span> <span class="fu">c</span>(</span>
<span id="cb6-22"><a href="#cb6-22" aria-hidden="true" tabindex="-1"></a> <span class="at">surprisal =</span> <span class="st">"surprisal (on mean)"</span>,</span>
<span id="cb6-23"><a href="#cb6-23" aria-hidden="true" tabindex="-1"></a> <span class="st">`</span><span class="at">surprisal.1</span><span class="st">`</span> <span class="ot">=</span> <span class="st">"surprisal (on log sd)"</span></span>
<span id="cb6-24"><a href="#cb6-24" aria-hidden="true" tabindex="-1"></a>)</span>
<span id="cb6-25"><a href="#cb6-25" aria-hidden="true" tabindex="-1"></a>model_labs <span class="ot"><-</span> <span class="fu">c</span>(</span>
<span id="cb6-26"><a href="#cb6-26" aria-hidden="true" tabindex="-1"></a> <span class="at">boyce_ngram =</span> <span class="st">"n-gram"</span>,</span>
<span id="cb6-27"><a href="#cb6-27" aria-hidden="true" tabindex="-1"></a> <span class="at">boyce_grnn =</span> <span class="st">"LSTM"</span>,</span>
<span id="cb6-28"><a href="#cb6-28" aria-hidden="true" tabindex="-1"></a> <span class="st">"TXL"</span> <span class="ot">=</span> <span class="st">"TXL"</span>,</span>
<span id="cb6-29"><a href="#cb6-29" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT2"</span> <span class="ot">=</span> <span class="st">"GPT2"</span>,</span>
<span id="cb6-30"><a href="#cb6-30" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT2-large"</span> <span class="ot">=</span> <span class="st">"GPT2-large"</span>,</span>
<span id="cb6-31"><a href="#cb6-31" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT2-xl"</span> <span class="ot">=</span> <span class="st">"GPT2-xl"</span>,</span>
<span id="cb6-32"><a href="#cb6-32" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT-Neo"</span> <span class="ot">=</span> <span class="st">"GPT-Neo"</span>,</span>
<span id="cb6-33"><a href="#cb6-33" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT-J"</span> <span class="ot">=</span> <span class="st">"GPT-J"</span>,</span>
<span id="cb6-34"><a href="#cb6-34" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT3-ada"</span> <span class="ot">=</span> <span class="st">"GPT3-ada"</span>,</span>
<span id="cb6-35"><a href="#cb6-35" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT3-curie"</span> <span class="ot">=</span> <span class="st">"GPT3-curie"</span>,</span>
<span id="cb6-36"><a href="#cb6-36" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT3-davinci"</span> <span class="ot">=</span> <span class="st">"GPT3-davinci"</span></span>
<span id="cb6-37"><a href="#cb6-37" aria-hidden="true" tabindex="-1"></a>)</span>
<span id="cb6-38"><a href="#cb6-38" aria-hidden="true" tabindex="-1"></a>lm_names <span class="ot"><-</span> <span class="fu">list</span>(</span>
<span id="cb6-39"><a href="#cb6-39" aria-hidden="true" tabindex="-1"></a> <span class="st">"boyce_ngram"</span>, <span class="st">"boyce_grnn"</span>,</span>
<span id="cb6-40"><a href="#cb6-40" aria-hidden="true" tabindex="-1"></a> <span class="st">"TXL"</span>,</span>
<span id="cb6-41"><a href="#cb6-41" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT2"</span>,</span>
<span id="cb6-42"><a href="#cb6-42" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT2-large"</span>,</span>
<span id="cb6-43"><a href="#cb6-43" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT2-xl"</span>,</span>
<span id="cb6-44"><a href="#cb6-44" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT-Neo"</span>,</span>
<span id="cb6-45"><a href="#cb6-45" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT-J"</span>,</span>
<span id="cb6-46"><a href="#cb6-46" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT3-ada"</span>,</span>
<span id="cb6-47"><a href="#cb6-47" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT3-curie"</span>,</span>
<span id="cb6-48"><a href="#cb6-48" aria-hidden="true" tabindex="-1"></a> <span class="st">"GPT3-davinci"</span></span>
<span id="cb6-49"><a href="#cb6-49" aria-hidden="true" tabindex="-1"></a>) <span class="sc">%>%</span> <span class="fu">set_names</span>(., .)</span>
<span id="cb6-50"><a href="#cb6-50" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb6-51"><a href="#cb6-51" aria-hidden="true" tabindex="-1"></a><span class="do">## Utils</span></span>
<span id="cb6-52"><a href="#cb6-52" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb6-53"><a href="#cb6-53" aria-hidden="true" tabindex="-1"></a>separate_modelnames <span class="ot"><-</span> <span class="cf">function</span>(df, <span class="at">modelnames_colname =</span> model, <span class="at">names =</span> lm_names) {</span>
<span id="cb6-54"><a href="#cb6-54" aria-hidden="true" tabindex="-1"></a> df <span class="sc">%>%</span></span>
<span id="cb6-55"><a href="#cb6-55" aria-hidden="true" tabindex="-1"></a> tidyr<span class="sc">::</span><span class="fu">separate</span>({{modelnames_colname}},</span>
<span id="cb6-56"><a href="#cb6-56" aria-hidden="true" tabindex="-1"></a> <span class="at">into =</span> <span class="fu">c</span>(<span class="st">"model"</span>, <span class="st">"by"</span>), <span class="at">sep =</span> <span class="st">"_"</span>, <span class="at">extra =</span> <span class="st">"merge"</span>) <span class="sc">%>%</span></span>
<span id="cb6-57"><a href="#cb6-57" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">model =</span> <span class="fu">ifelse</span>(model <span class="sc">==</span> <span class="st">"boyce"</span>, <span class="fu">paste0</span>(<span class="st">"boyce_"</span>, by), model)) <span class="sc">%>%</span></span>
<span id="cb6-58"><a href="#cb6-58" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">context_len =</span> <span class="fu">ifelse</span>(</span>
<span id="cb6-59"><a href="#cb6-59" aria-hidden="true" tabindex="-1"></a> <span class="fu">is.na</span>(by), <span class="st">"max"</span>, <span class="fu">ifelse</span>(stringr<span class="sc">::</span><span class="fu">str_starts</span>(model, <span class="st">"boyce"</span>), <span class="st">"bysent"</span>, by))</span>
<span id="cb6-60"><a href="#cb6-60" aria-hidden="true" tabindex="-1"></a> ) <span class="sc">%>%</span> <span class="fu">select</span>(<span class="sc">-</span>by) <span class="sc">%>%</span></span>
<span id="cb6-61"><a href="#cb6-61" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">context_len =</span> forcats<span class="sc">::</span><span class="fu">fct_relevel</span>(context_len, <span class="fu">c</span>(<span class="st">"max"</span>)),</span>
<span id="cb6-62"><a href="#cb6-62" aria-hidden="true" tabindex="-1"></a> <span class="at">model =</span> forcats<span class="sc">::</span><span class="fu">fct_relevel</span>(model, lm_names))</span>
<span id="cb6-63"><a href="#cb6-63" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb6-64"><a href="#cb6-64" aria-hidden="true" tabindex="-1"></a><span class="co"># for nicer plot labels</span></span>
<span id="cb6-65"><a href="#cb6-65" aria-hidden="true" tabindex="-1"></a>my_labeller <span class="ot"><-</span> <span class="fu">labeller</span>(</span>
<span id="cb6-66"><a href="#cb6-66" aria-hidden="true" tabindex="-1"></a> <span class="at">context_len =</span> context_len_labs,</span>
<span id="cb6-67"><a href="#cb6-67" aria-hidden="true" tabindex="-1"></a> <span class="at">term =</span> term_labs,</span>
<span id="cb6-68"><a href="#cb6-68" aria-hidden="true" tabindex="-1"></a> <span class="at">model =</span> model_labs,</span>
<span id="cb6-69"><a href="#cb6-69" aria-hidden="true" tabindex="-1"></a> <span class="at">est_type=</span><span class="fu">c</span>(<span class="at">mean=</span><span class="st">"mean RT"</span>, <span class="at">var=</span>glue<span class="sc">::</span><span class="fu">glue</span>(<span class="st">"log(sd RT)"</span>)))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<div class="cell">
<details open="">
<summary>Options#|</summary>
<div class="sourceCode cell-code" id="cb7"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb7-1"><a href="#cb7-1" aria-hidden="true" tabindex="-1"></a><span class="co"># Whether to only plot two context lengths or all three</span></span>
<span id="cb7-2"><a href="#cb7-2" aria-hidden="true" tabindex="-1"></a>twocontexts <span class="ot"><-</span> <span class="cn">TRUE</span> <span class="co"># (re-run notebook after modifying)</span></span>
<span id="cb7-3"><a href="#cb7-3" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb7-4"><a href="#cb7-4" aria-hidden="true" tabindex="-1"></a><span class="cf">if</span> (twocontexts) {</span>
<span id="cb7-5"><a href="#cb7-5" aria-hidden="true" tabindex="-1"></a> context_lens <span class="ot"><-</span> <span class="fu">c</span>(<span class="st">"max"</span>, <span class="st">"bysent"</span>)</span>
<span id="cb7-6"><a href="#cb7-6" aria-hidden="true" tabindex="-1"></a> context_pref <span class="ot"><-</span> <span class="st">"2"</span></span>
<span id="cb7-7"><a href="#cb7-7" aria-hidden="true" tabindex="-1"></a>} <span class="cf">else</span> {</span>
<span id="cb7-8"><a href="#cb7-8" aria-hidden="true" tabindex="-1"></a> context_lens <span class="ot"><-</span> <span class="fu">c</span>(<span class="st">"max"</span>, <span class="st">"80"</span>, <span class="st">"bysent"</span>)</span>
<span id="cb7-9"><a href="#cb7-9" aria-hidden="true" tabindex="-1"></a> context_pref <span class="ot"><-</span> <span class="st">""</span></span>
<span id="cb7-10"><a href="#cb7-10" aria-hidden="true" tabindex="-1"></a>}</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
</section>
<section id="gam-smooths" class="level2">
<h2 class="anchored" data-anchor-id="gam-smooths">GAM smooths</h2>
<p>Plotting the fits of GAM smooths for effect of surprisal on mean and variance in RT.</p>
<section id="load-data" class="level3">
<h3 class="anchored" data-anchor-id="load-data">Load data</h3>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb8"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb8-1"><a href="#cb8-1" aria-hidden="true" tabindex="-1"></a>load_in_data<span class="ot"><-</span> <span class="cf">function</span>(f, <span class="at">with_est_types =</span> <span class="cn">TRUE</span>) {</span>
<span id="cb8-2"><a href="#cb8-2" aria-hidden="true" tabindex="-1"></a> d <span class="ot"><-</span> readr<span class="sc">::</span><span class="fu">read_csv</span>(f,</span>
<span id="cb8-3"><a href="#cb8-3" aria-hidden="true" tabindex="-1"></a> <span class="at">col_names =</span> <span class="cn">TRUE</span>, <span class="at">show_col_types =</span> <span class="cn">FALSE</span>) <span class="sc">%>%</span></span>
<span id="cb8-4"><a href="#cb8-4" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">context_len =</span> forcats<span class="sc">::</span><span class="fu">fct_relevel</span>(context_len, <span class="fu">c</span>(<span class="st">"max"</span>)),</span>
<span id="cb8-5"><a href="#cb8-5" aria-hidden="true" tabindex="-1"></a> <span class="at">model =</span> forcats<span class="sc">::</span><span class="fu">fct_relevel</span>(model, lm_names))</span>
<span id="cb8-6"><a href="#cb8-6" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (with_est_types) d <span class="ot"><-</span> d <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">est_type =</span> <span class="fu">factor</span>(est_type))</span>
<span id="cb8-7"><a href="#cb8-7" aria-hidden="true" tabindex="-1"></a> <span class="fu">return</span>(d)</span>
<span id="cb8-8"><a href="#cb8-8" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb8-9"><a href="#cb8-9" aria-hidden="true" tabindex="-1"></a><span class="co"># get surprisal means and densities </span></span>
<span id="cb8-10"><a href="#cb8-10" aria-hidden="true" tabindex="-1"></a><span class="co"># (from natural-stories-surprisals/EDA_surps_SPRT.Rmd)</span></span>
<span id="cb8-11"><a href="#cb8-11" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-12"><a href="#cb8-12" aria-hidden="true" tabindex="-1"></a>surprisal_densities <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-13"><a href="#cb8-13" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"surprisal_densities.csv"</span>), <span class="at">with_est_types =</span> F) <span class="sc">%>%</span></span>
<span id="cb8-14"><a href="#cb8-14" aria-hidden="true" tabindex="-1"></a> <span class="co"># there is some odd point at ~37 this makes an unnecessarily long tail</span></span>
<span id="cb8-15"><a href="#cb8-15" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(model <span class="sc">%in%</span> lm_names, surprisal <span class="sc"><</span> <span class="dv">25</span>) </span>
<span id="cb8-16"><a href="#cb8-16" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-17"><a href="#cb8-17" aria-hidden="true" tabindex="-1"></a>surprisal_means <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-18"><a href="#cb8-18" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"surprisal_means.csv"</span>), <span class="at">with_est_types =</span> F) <span class="sc">%>%</span> </span>
<span id="cb8-19"><a href="#cb8-19" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(model <span class="sc">%in%</span> lm_names)</span>
<span id="cb8-20"><a href="#cb8-20" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-21"><a href="#cb8-21" aria-hidden="true" tabindex="-1"></a>models_in_desc_PPL_order <span class="ot"><-</span> surprisal_means <span class="sc">%>%</span> </span>
<span id="cb8-22"><a href="#cb8-22" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">==</span> <span class="st">"max"</span> <span class="sc">|</span> model <span class="sc">%>%</span> stringr<span class="sc">::</span><span class="fu">str_starts</span>(<span class="st">"boyce"</span>)) <span class="sc">%>%</span> </span>
<span id="cb8-23"><a href="#cb8-23" aria-hidden="true" tabindex="-1"></a> <span class="fu">arrange</span>(<span class="fu">desc</span>(mean_surprisal)) <span class="sc">%>%</span> <span class="fu">pull</span>(model) <span class="sc">%>%</span> as.vector</span>
<span id="cb8-24"><a href="#cb8-24" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-25"><a href="#cb8-25" aria-hidden="true" tabindex="-1"></a><span class="co"># GAMs fit for paper (using fitdata=surps_lms.RTs.rds, and correct lagging)</span></span>
<span id="cb8-26"><a href="#cb8-26" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-27"><a href="#cb8-27" aria-hidden="true" tabindex="-1"></a><span class="co"># smooth0var: nonlinear gaussian models with constant variance</span></span>
<span id="cb8-28"><a href="#cb8-28" aria-hidden="true" tabindex="-1"></a>data_to_plot_var0_gauss_wprev <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-29"><a href="#cb8-29" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_var0_gauss_wprev_N200.csv"</span>))</span>
<span id="cb8-30"><a href="#cb8-30" aria-hidden="true" tabindex="-1"></a>data_to_plot_var0_gauss_w3prev <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-31"><a href="#cb8-31" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_var0_gauss_w3prev_N200.csv"</span>))</span>
<span id="cb8-32"><a href="#cb8-32" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-33"><a href="#cb8-33" aria-hidden="true" tabindex="-1"></a><span class="do">##### Linear control with constant variance, with previous, with family=gaulss()</span></span>
<span id="cb8-34"><a href="#cb8-34" aria-hidden="true" tabindex="-1"></a>data_to_plot_lin0var_wprev <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-35"><a href="#cb8-35" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_lin0var_wprev_N200.csv"</span>))</span>
<span id="cb8-36"><a href="#cb8-36" aria-hidden="true" tabindex="-1"></a><span class="do">##### Linear control with constant variance, with previous, with family=gaulss()</span></span>
<span id="cb8-37"><a href="#cb8-37" aria-hidden="true" tabindex="-1"></a>data_to_plot_linear_wprevm <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-38"><a href="#cb8-38" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_linear_wprevm_N200.csv"</span>))</span>
<span id="cb8-39"><a href="#cb8-39" aria-hidden="true" tabindex="-1"></a><span class="do">##### Main models: Smooth GAMs with previous surprisal predictors for mean only</span></span>
<span id="cb8-40"><a href="#cb8-40" aria-hidden="true" tabindex="-1"></a>data_to_plot_smooth_wprevm <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-41"><a href="#cb8-41" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_wprevm_N200.csv"</span>))</span>
<span id="cb8-42"><a href="#cb8-42" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-43"><a href="#cb8-43" aria-hidden="true" tabindex="-1"></a><span class="do">#### As above (Smooth GAMs with previous surprisal for mean), </span></span>
<span id="cb8-44"><a href="#cb8-44" aria-hidden="true" tabindex="-1"></a><span class="do">#### but removing most surprising items</span></span>
<span id="cb8-45"><a href="#cb8-45" aria-hidden="true" tabindex="-1"></a><span class="co"># Note, only for GPT-3 Davinci full-context.</span></span>
<span id="cb8-46"><a href="#cb8-46" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb8-47"><a href="#cb8-47" aria-hidden="true" tabindex="-1"></a>data_to_plot_datasubsetless6_smooth_wprevm <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-48"><a href="#cb8-48" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_datasubsetless6_wprevm_N200.csv"</span>)) <span class="sc">%>%</span></span>
<span id="cb8-49"><a href="#cb8-49" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">cutoff =</span> <span class="dv">6</span>)</span>
<span id="cb8-50"><a href="#cb8-50" aria-hidden="true" tabindex="-1"></a>data_to_plot_datasubsetless12_smooth_wprevm <span class="ot"><-</span> <span class="fu">load_in_data</span>(</span>
<span id="cb8-51"><a href="#cb8-51" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"GAM_predictions/data_to_plot_NEW_datasubsetless12_wprevm_N200.csv"</span>)) <span class="sc">%>%</span></span>
<span id="cb8-52"><a href="#cb8-52" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">cutoff =</span> <span class="dv">12</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
</section>
<section id="plot-smooths" class="level3">
<h3 class="anchored" data-anchor-id="plot-smooths">Plot smooths</h3>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb9"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb9-1"><a href="#cb9-1" aria-hidden="true" tabindex="-1"></a>plot_data <span class="ot"><-</span> <span class="cf">function</span>(</span>
<span id="cb9-2"><a href="#cb9-2" aria-hidden="true" tabindex="-1"></a> data_to_plot, <span class="at">use_shifted_est=</span><span class="cn">TRUE</span>,</span>
<span id="cb9-3"><a href="#cb9-3" aria-hidden="true" tabindex="-1"></a> <span class="at">se.mult=</span><span class="fl">1.96</span>, <span class="co"># use approx qnorm(1 - 0.05/2)</span></span>
<span id="cb9-4"><a href="#cb9-4" aria-hidden="true" tabindex="-1"></a> <span class="at">trans =</span> I, <span class="co">#transform function to apply to the yvalues</span></span>
<span id="cb9-5"><a href="#cb9-5" aria-hidden="true" tabindex="-1"></a> <span class="at">controls =</span> <span class="cn">NULL</span>,</span>
<span id="cb9-6"><a href="#cb9-6" aria-hidden="true" tabindex="-1"></a> <span class="at">surp_units =</span> <span class="st">"nats"</span>,</span>
<span id="cb9-7"><a href="#cb9-7" aria-hidden="true" tabindex="-1"></a> <span class="at">density_df =</span> surprisal_densities,</span>
<span id="cb9-8"><a href="#cb9-8" aria-hidden="true" tabindex="-1"></a> <span class="at">static_lty =</span> <span class="cn">NULL</span>,</span>
<span id="cb9-9"><a href="#cb9-9" aria-hidden="true" tabindex="-1"></a> <span class="at">additional_controls =</span> <span class="cn">NULL</span>,</span>
<span id="cb9-10"><a href="#cb9-10" aria-hidden="true" tabindex="-1"></a> <span class="at">ylab =</span> <span class="st">"fitted effect</span><span class="sc">\n</span><span class="st">estimate (+ intercept) ±2*SE"</span>,</span>
<span id="cb9-11"><a href="#cb9-11" aria-hidden="true" tabindex="-1"></a> ...) {</span>
<span id="cb9-12"><a href="#cb9-12" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (surp_units <span class="sc">==</span> <span class="st">"bits"</span>) {</span>
<span id="cb9-13"><a href="#cb9-13" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="ot"><-</span> data_to_plot <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">surprisal =</span> surprisal <span class="sc">/</span> <span class="fu">log</span>(<span class="dv">2</span>))</span>
<span id="cb9-14"><a href="#cb9-14" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (<span class="sc">!</span><span class="fu">is.null</span>(controls)) {</span>
<span id="cb9-15"><a href="#cb9-15" aria-hidden="true" tabindex="-1"></a> controls <span class="ot"><-</span> controls <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">surprisal =</span> surprisal <span class="sc">/</span> <span class="fu">log</span>(<span class="dv">2</span>))</span>
<span id="cb9-16"><a href="#cb9-16" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-17"><a href="#cb9-17" aria-hidden="true" tabindex="-1"></a> xlab <span class="ot"><-</span> <span class="st">"surprisal (bits)"</span>; xbreaks <span class="ot"><-</span> <span class="fu">seq</span>(<span class="dv">0</span>, <span class="dv">50</span>, <span class="dv">15</span>)</span>
<span id="cb9-18"><a href="#cb9-18" aria-hidden="true" tabindex="-1"></a> } <span class="cf">else</span> <span class="cf">if</span> (surp_units <span class="sc">==</span> <span class="st">"nats"</span>) {</span>
<span id="cb9-19"><a href="#cb9-19" aria-hidden="true" tabindex="-1"></a> xlab <span class="ot"><-</span> <span class="st">"surprisal (nats)"</span>; xbreaks <span class="ot"><-</span> <span class="fu">seq</span>(<span class="dv">0</span>, <span class="dv">30</span>, <span class="dv">10</span>)</span>
<span id="cb9-20"><a href="#cb9-20" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-21"><a href="#cb9-21" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (use_shifted_est) data_to_plot <span class="ot"><-</span> <span class="fu">mutate</span>(data_to_plot, <span class="at">est =</span> est_shifted)</span>
<span id="cb9-22"><a href="#cb9-22" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> data_to_plot <span class="sc">%>%</span></span>
<span id="cb9-23"><a href="#cb9-23" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> surprisal, <span class="at">y =</span> <span class="fu">trans</span>(est),</span>
<span id="cb9-24"><a href="#cb9-24" aria-hidden="true" tabindex="-1"></a> <span class="at">ymin =</span> <span class="fu">trans</span>(est <span class="sc">-</span> se.mult<span class="sc">*</span>se), <span class="at">ymax =</span> <span class="fu">trans</span>(est <span class="sc">+</span> se.mult<span class="sc">*</span>se),</span>
<span id="cb9-25"><a href="#cb9-25" aria-hidden="true" tabindex="-1"></a> <span class="at">fill =</span> context_len))</span>
<span id="cb9-26"><a href="#cb9-26" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (<span class="sc">!</span><span class="fu">is.null</span>(controls)) {</span>
<span id="cb9-27"><a href="#cb9-27" aria-hidden="true" tabindex="-1"></a> <span class="co"># Add in linear data</span></span>
<span id="cb9-28"><a href="#cb9-28" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (use_shifted_est) controls <span class="ot"><-</span> <span class="fu">mutate</span>(controls, <span class="at">est =</span> est_shifted)</span>
<span id="cb9-29"><a href="#cb9-29" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb9-30"><a href="#cb9-30" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_ribbon</span>(<span class="at">data =</span> controls, <span class="fu">aes</span>(<span class="at">y=</span><span class="cn">NULL</span>), </span>
<span id="cb9-31"><a href="#cb9-31" aria-hidden="true" tabindex="-1"></a> <span class="at">fill =</span> linear_control_color, <span class="at">size =</span> <span class="dv">0</span>, <span class="at">alpha =</span> <span class="fl">0.1</span>) <span class="sc">+</span></span>
<span id="cb9-32"><a href="#cb9-32" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_line</span>(<span class="at">data =</span> controls, </span>
<span id="cb9-33"><a href="#cb9-33" aria-hidden="true" tabindex="-1"></a> <span class="at">lty=</span> linear_control_lty, <span class="at">color =</span> linear_control_color, </span>
<span id="cb9-34"><a href="#cb9-34" aria-hidden="true" tabindex="-1"></a> <span class="at">size =</span> linear_control_lsize, <span class="at">alpha=</span> <span class="fl">1.0</span>)</span>
<span id="cb9-35"><a href="#cb9-35" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-36"><a href="#cb9-36" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (<span class="sc">!</span><span class="fu">is.null</span>(additional_controls)) {</span>
<span id="cb9-37"><a href="#cb9-37" aria-hidden="true" tabindex="-1"></a> <span class="co"># Add in other data</span></span>
<span id="cb9-38"><a href="#cb9-38" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (use_shifted_est) additional_controls <span class="ot"><-</span> <span class="fu">mutate</span>(</span>
<span id="cb9-39"><a href="#cb9-39" aria-hidden="true" tabindex="-1"></a> additional_controls, <span class="at">est =</span> est_shifted)</span>
<span id="cb9-40"><a href="#cb9-40" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb9-41"><a href="#cb9-41" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_ribbon</span>(<span class="at">data =</span> additional_controls, <span class="fu">aes</span>(<span class="at">y=</span><span class="cn">NULL</span>), </span>
<span id="cb9-42"><a href="#cb9-42" aria-hidden="true" tabindex="-1"></a> <span class="co"># fill = additional_control_color, </span></span>
<span id="cb9-43"><a href="#cb9-43" aria-hidden="true" tabindex="-1"></a> <span class="at">size =</span> <span class="dv">0</span>, <span class="at">alpha =</span> <span class="fl">0.1</span>) <span class="sc">+</span></span>
<span id="cb9-44"><a href="#cb9-44" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_line</span>(<span class="at">data =</span> additional_controls, <span class="fu">aes</span>(<span class="at">color =</span> context_len),</span>
<span id="cb9-45"><a href="#cb9-45" aria-hidden="true" tabindex="-1"></a> <span class="at">lty =</span> additional_control_lty, <span class="co">#color = additional_control_color, </span></span>
<span id="cb9-46"><a href="#cb9-46" aria-hidden="true" tabindex="-1"></a> <span class="at">size =</span> additional_control_lsize, <span class="at">alpha=</span> <span class="fl">1.0</span>)</span>
<span id="cb9-47"><a href="#cb9-47" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-48"><a href="#cb9-48" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (<span class="sc">!</span><span class="fu">is.null</span>(density_df)) {</span>
<span id="cb9-49"><a href="#cb9-49" aria-hidden="true" tabindex="-1"></a> max_surps <span class="ot">=</span> data_to_plot <span class="sc">%>%</span> <span class="fu">group_by</span>(model, context_len) <span class="sc">%>%</span></span>
<span id="cb9-50"><a href="#cb9-50" aria-hidden="true" tabindex="-1"></a> <span class="fu">summarise</span>(<span class="at">max_surp=</span><span class="fu">max</span>(surprisal), <span class="at">.groups=</span><span class="st">"drop"</span>)</span>
<span id="cb9-51"><a href="#cb9-51" aria-hidden="true" tabindex="-1"></a> density_df <span class="ot"><-</span> density_df <span class="sc">%>%</span> </span>
<span id="cb9-52"><a href="#cb9-52" aria-hidden="true" tabindex="-1"></a> <span class="fu">full_join</span>(max_surps, <span class="at">by =</span> <span class="fu">c</span>(<span class="st">"model"</span>, <span class="st">"context_len"</span>)) <span class="sc">%>%</span></span>
<span id="cb9-53"><a href="#cb9-53" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(surprisal <span class="sc"><=</span> max_surp)</span>
<span id="cb9-54"><a href="#cb9-54" aria-hidden="true" tabindex="-1"></a> density_ymin <span class="ot"><-</span> <span class="cf">if</span> (use_shifted_est) <span class="dv">312</span> <span class="cf">else</span> <span class="sc">-</span><span class="dv">10</span></span>
<span id="cb9-55"><a href="#cb9-55" aria-hidden="true" tabindex="-1"></a> density_df <span class="ot"><-</span> <span class="fu">mutate</span>(density_df, <span class="at">density =</span> <span class="dv">120</span> <span class="sc">*</span> density <span class="sc">+</span> density_ymin)</span>
<span id="cb9-56"><a href="#cb9-56" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb9-57"><a href="#cb9-57" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_line</span>(</span>
<span id="cb9-58"><a href="#cb9-58" aria-hidden="true" tabindex="-1"></a> <span class="at">data =</span> density_df <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">est_type =</span> <span class="st">"mean"</span>), </span>
<span id="cb9-59"><a href="#cb9-59" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">ymin =</span> <span class="cn">NULL</span>, <span class="at">ymax =</span> <span class="cn">NULL</span>, <span class="at">y =</span> density, <span class="at">x =</span> surprisal, <span class="at">linetype =</span> <span class="cn">NULL</span>), </span>
<span id="cb9-60"><a href="#cb9-60" aria-hidden="true" tabindex="-1"></a> <span class="at">linetype =</span> <span class="st">"solid"</span>,</span>
<span id="cb9-61"><a href="#cb9-61" aria-hidden="true" tabindex="-1"></a> <span class="at">color =</span> density_color, <span class="at">alpha=</span>.<span class="dv">35</span>)</span>
<span id="cb9-62"><a href="#cb9-62" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb9-63"><a href="#cb9-63" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_ribbon</span>(<span class="at">data =</span> density_df <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">est_type =</span> <span class="st">"mean"</span>),</span>
<span id="cb9-64"><a href="#cb9-64" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">x =</span> surprisal, <span class="at">y =</span> <span class="cn">NULL</span>, <span class="co"># forget the y aesthetic</span></span>
<span id="cb9-65"><a href="#cb9-65" aria-hidden="true" tabindex="-1"></a> <span class="at">ymin =</span> density_ymin, <span class="at">ymax =</span> density),</span>
<span id="cb9-66"><a href="#cb9-66" aria-hidden="true" tabindex="-1"></a> <span class="at">fill =</span> density_color, <span class="at">alpha =</span> <span class="fl">0.2</span>)</span>
<span id="cb9-67"><a href="#cb9-67" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-68"><a href="#cb9-68" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span> <span class="fu">geom_ribbon</span>(<span class="fu">aes</span>(<span class="at">y=</span><span class="cn">NULL</span>), <span class="at">alpha =</span> <span class="fl">0.2</span>, <span class="at">size=</span><span class="dv">0</span>)</span>
<span id="cb9-69"><a href="#cb9-69" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> <span class="cf">if</span> (<span class="sc">!</span><span class="fu">is.null</span>(static_lty)) {</span>
<span id="cb9-70"><a href="#cb9-70" aria-hidden="true" tabindex="-1"></a> p <span class="sc">+</span> <span class="fu">geom_line</span>(<span class="fu">aes</span>(<span class="at">color=</span>context_len), <span class="at">linetype =</span> static_lty)</span>
<span id="cb9-71"><a href="#cb9-71" aria-hidden="true" tabindex="-1"></a> } <span class="cf">else</span> {</span>
<span id="cb9-72"><a href="#cb9-72" aria-hidden="true" tabindex="-1"></a> p <span class="sc">+</span> <span class="fu">geom_line</span>(<span class="fu">aes</span>(<span class="at">color=</span>context_len, <span class="at">linetype =</span> est_type))</span>
<span id="cb9-73"><a href="#cb9-73" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-74"><a href="#cb9-74" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb9-75"><a href="#cb9-75" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_fill_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb9-76"><a href="#cb9-76" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb9-77"><a href="#cb9-77" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_linetype_discrete</span>(<span class="at">name =</span> <span class="st">"effect"</span>, <span class="at">labels =</span> est_type_labs) <span class="sc">+</span></span>
<span id="cb9-78"><a href="#cb9-78" aria-hidden="true" tabindex="-1"></a> <span class="fu">facet_grid</span>(..., <span class="at">labeller =</span> my_labeller) <span class="sc">+</span></span>
<span id="cb9-79"><a href="#cb9-79" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_x_continuous</span>(<span class="at">breaks =</span> xbreaks) <span class="sc">+</span></span>
<span id="cb9-80"><a href="#cb9-80" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="at">x =</span> xlab, <span class="at">y=</span>ylab)</span>
<span id="cb9-81"><a href="#cb9-81" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb9-82"><a href="#cb9-82" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb9-83"><a href="#cb9-83" aria-hidden="true" tabindex="-1"></a>plot_easy_mean_patch <span class="ot"><-</span> <span class="cf">function</span>(</span>
<span id="cb9-84"><a href="#cb9-84" aria-hidden="true" tabindex="-1"></a> data_to_plot, data_to_plot_control,</span>
<span id="cb9-85"><a href="#cb9-85" aria-hidden="true" tabindex="-1"></a> <span class="at">order_models_by_PPL =</span> <span class="cn">TRUE</span>,</span>
<span id="cb9-86"><a href="#cb9-86" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> context_lens, <span class="at">density_df =</span> surprisal_densities, </span>
<span id="cb9-87"><a href="#cb9-87" aria-hidden="true" tabindex="-1"></a> <span class="at">meanbreaks =</span> <span class="fu">seq</span>(<span class="sc">-</span><span class="dv">25</span>, <span class="dv">500</span>, <span class="dv">25</span>), ...){</span>
<span id="cb9-88"><a href="#cb9-88" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (order_models_by_PPL) {</span>
<span id="cb9-89"><a href="#cb9-89" aria-hidden="true" tabindex="-1"></a> data_to_plot<span class="sc">$</span>model <span class="ot"><-</span> <span class="fu">factor</span>(</span>
<span id="cb9-90"><a href="#cb9-90" aria-hidden="true" tabindex="-1"></a> data_to_plot<span class="sc">$</span>model, <span class="at">levels =</span> models_in_desc_PPL_order)</span>
<span id="cb9-91"><a href="#cb9-91" aria-hidden="true" tabindex="-1"></a> data_to_plot_control<span class="sc">$</span>model <span class="ot"><-</span> <span class="fu">factor</span>(data_to_plot_control<span class="sc">$</span>model, <span class="at">levels =</span> models_in_desc_PPL_order)</span>
<span id="cb9-92"><a href="#cb9-92" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-93"><a href="#cb9-93" aria-hidden="true" tabindex="-1"></a> </span>
<span id="cb9-94"><a href="#cb9-94" aria-hidden="true" tabindex="-1"></a> which_descr <span class="ot"><-</span> <span class="st">"mean RT"</span></span>
<span id="cb9-95"><a href="#cb9-95" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="ot"><-</span> data_to_plot <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"mean"</span>)</span>
<span id="cb9-96"><a href="#cb9-96" aria-hidden="true" tabindex="-1"></a> data_to_plot_control <span class="ot"><-</span> data_to_plot_control <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"mean"</span>)</span>
<span id="cb9-97"><a href="#cb9-97" aria-hidden="true" tabindex="-1"></a> space <span class="ot"><-</span> <span class="st">"free"</span>; ybreaks <span class="ot"><-</span> meanbreaks</span>
<span id="cb9-98"><a href="#cb9-98" aria-hidden="true" tabindex="-1"></a> static_lty <span class="ot">=</span> <span class="st">"solid"</span>; ltyguide <span class="ot"><-</span> <span class="st">"none"</span></span>
<span id="cb9-99"><a href="#cb9-99" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="sc">%>%</span> </span>
<span id="cb9-100"><a href="#cb9-100" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens) <span class="sc">%>%</span></span>
<span id="cb9-101"><a href="#cb9-101" aria-hidden="true" tabindex="-1"></a> <span class="fu">plot_data</span>(<span class="at">controls =</span> data_to_plot_control <span class="sc">%>%</span></span>
<span id="cb9-102"><a href="#cb9-102" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens),</span>
<span id="cb9-103"><a href="#cb9-103" aria-hidden="true" tabindex="-1"></a> <span class="at">density_df =</span> density_df <span class="sc">%>%</span> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens),</span>
<span id="cb9-104"><a href="#cb9-104" aria-hidden="true" tabindex="-1"></a> <span class="at">static_lty =</span> static_lty,</span>
<span id="cb9-105"><a href="#cb9-105" aria-hidden="true" tabindex="-1"></a> <span class="at">rows =</span></span>
<span id="cb9-106"><a href="#cb9-106" aria-hidden="true" tabindex="-1"></a> context_len <span class="co">#+ est_type</span></span>
<span id="cb9-107"><a href="#cb9-107" aria-hidden="true" tabindex="-1"></a> <span class="sc">~</span> model,</span>
<span id="cb9-108"><a href="#cb9-108" aria-hidden="true" tabindex="-1"></a> <span class="at">scales=</span><span class="st">"free"</span>, <span class="at">space=</span>space,</span>
<span id="cb9-109"><a href="#cb9-109" aria-hidden="true" tabindex="-1"></a> <span class="at">switch=</span><span class="st">"y"</span>,</span>
<span id="cb9-110"><a href="#cb9-110" aria-hidden="true" tabindex="-1"></a> <span class="at">ylab =</span> <span class="st">"mean RT ±2*SE"</span>,</span>
<span id="cb9-111"><a href="#cb9-111" aria-hidden="true" tabindex="-1"></a> ...) <span class="sc">+</span></span>
<span id="cb9-112"><a href="#cb9-112" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="co">#title = "GAM fits of the effect of surprisal on reading time",</span></span>
<span id="cb9-113"><a href="#cb9-113" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> glue<span class="sc">::</span><span class="fu">glue</span>(<span class="st">"Partial effect of surprisal on {which_descr}"</span>)) <span class="sc">+</span></span>
<span id="cb9-114"><a href="#cb9-114" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(</span>
<span id="cb9-115"><a href="#cb9-115" aria-hidden="true" tabindex="-1"></a> <span class="at">strip.placement=</span><span class="st">'outside'</span>,</span>
<span id="cb9-116"><a href="#cb9-116" aria-hidden="true" tabindex="-1"></a> <span class="co"># axis.title.x = element_blank(), axis.text.x = element_blank(),</span></span>
<span id="cb9-117"><a href="#cb9-117" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.position =</span> <span class="fu">c</span>(.<span class="dv">08</span>,.<span class="dv">7</span>),</span>
<span id="cb9-118"><a href="#cb9-118" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.background =</span> <span class="fu">element_rect</span>(<span class="at">size =</span> <span class="dv">0</span>, <span class="at">color =</span> <span class="st">"white"</span>)) <span class="sc">+</span></span>
<span id="cb9-119"><a href="#cb9-119" aria-hidden="true" tabindex="-1"></a> <span class="co"># guides(linetype = ltyguide) +</span></span>
<span id="cb9-120"><a href="#cb9-120" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_y_continuous</span>(<span class="at">breaks =</span> ybreaks, <span class="at">position =</span> <span class="st">"right"</span>)</span>
<span id="cb9-121"><a href="#cb9-121" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb9-122"><a href="#cb9-122" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb9-123"><a href="#cb9-123" aria-hidden="true" tabindex="-1"></a>plot_easy_var_patch <span class="ot"><-</span> <span class="cf">function</span>(</span>
<span id="cb9-124"><a href="#cb9-124" aria-hidden="true" tabindex="-1"></a> data_to_plot, data_to_plot_control,</span>
<span id="cb9-125"><a href="#cb9-125" aria-hidden="true" tabindex="-1"></a> <span class="at">order_models_by_PPL =</span> <span class="cn">TRUE</span>,</span>
<span id="cb9-126"><a href="#cb9-126" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> context_lens, <span class="at">density_df =</span> surprisal_densities, ...){</span>
<span id="cb9-127"><a href="#cb9-127" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (order_models_by_PPL) {</span>
<span id="cb9-128"><a href="#cb9-128" aria-hidden="true" tabindex="-1"></a> data_to_plot<span class="sc">$</span>model <span class="ot"><-</span> <span class="fu">factor</span>(</span>
<span id="cb9-129"><a href="#cb9-129" aria-hidden="true" tabindex="-1"></a> data_to_plot<span class="sc">$</span>model, <span class="at">levels =</span> models_in_desc_PPL_order)</span>
<span id="cb9-130"><a href="#cb9-130" aria-hidden="true" tabindex="-1"></a> data_to_plot_control<span class="sc">$</span>model <span class="ot"><-</span> <span class="fu">factor</span>(</span>
<span id="cb9-131"><a href="#cb9-131" aria-hidden="true" tabindex="-1"></a> data_to_plot_control<span class="sc">$</span>model, <span class="at">levels =</span> models_in_desc_PPL_order)</span>
<span id="cb9-132"><a href="#cb9-132" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb9-133"><a href="#cb9-133" aria-hidden="true" tabindex="-1"></a> varbreaks <span class="ot"><-</span> <span class="cf">function</span>(x) {<span class="cf">if</span> (<span class="fu">max</span>(x)<span class="sc"><</span><span class="fl">5.3</span>) <span class="fu">seq</span>(<span class="dv">4</span>,<span class="dv">6</span>,.<span class="dv">2</span>) <span class="cf">else</span> <span class="fu">seq</span>(<span class="dv">3</span>,<span class="dv">7</span>, .<span class="dv">5</span>)}</span>
<span id="cb9-134"><a href="#cb9-134" aria-hidden="true" tabindex="-1"></a> which_descr <span class="ot"><-</span> <span class="st">"log standard deviation in RT"</span></span>
<span id="cb9-135"><a href="#cb9-135" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="ot"><-</span> data_to_plot <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"var"</span>)</span>
<span id="cb9-136"><a href="#cb9-136" aria-hidden="true" tabindex="-1"></a> data_to_plot_control <span class="ot"><-</span> data_to_plot_control <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"var"</span>)</span>
<span id="cb9-137"><a href="#cb9-137" aria-hidden="true" tabindex="-1"></a> space <span class="ot"><-</span> <span class="st">"free"</span>; ybreaks <span class="ot"><-</span> varbreaks</span>
<span id="cb9-138"><a href="#cb9-138" aria-hidden="true" tabindex="-1"></a> static_lty <span class="ot">=</span> variance_lty; ltyguide <span class="ot"><-</span> <span class="st">"none"</span></span>
<span id="cb9-139"><a href="#cb9-139" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="sc">%>%</span></span>
<span id="cb9-140"><a href="#cb9-140" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens) <span class="sc">%>%</span></span>
<span id="cb9-141"><a href="#cb9-141" aria-hidden="true" tabindex="-1"></a> <span class="fu">plot_data</span>(<span class="at">controls =</span> data_to_plot_control <span class="sc">%>%</span></span>
<span id="cb9-142"><a href="#cb9-142" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens),</span>
<span id="cb9-143"><a href="#cb9-143" aria-hidden="true" tabindex="-1"></a> <span class="at">density_df =</span> <span class="cn">NULL</span>,</span>
<span id="cb9-144"><a href="#cb9-144" aria-hidden="true" tabindex="-1"></a> <span class="at">ylab =</span> <span class="st">"log (sd RT) ±2*SE"</span>,</span>
<span id="cb9-145"><a href="#cb9-145" aria-hidden="true" tabindex="-1"></a> <span class="at">static_lty =</span> static_lty,</span>
<span id="cb9-146"><a href="#cb9-146" aria-hidden="true" tabindex="-1"></a> <span class="at">rows =</span></span>
<span id="cb9-147"><a href="#cb9-147" aria-hidden="true" tabindex="-1"></a> context_len <span class="co">#+ est_type</span></span>
<span id="cb9-148"><a href="#cb9-148" aria-hidden="true" tabindex="-1"></a> <span class="sc">~</span> model,</span>
<span id="cb9-149"><a href="#cb9-149" aria-hidden="true" tabindex="-1"></a> <span class="at">scales=</span><span class="st">"free"</span>, <span class="at">space=</span>space,</span>
<span id="cb9-150"><a href="#cb9-150" aria-hidden="true" tabindex="-1"></a> <span class="at">switch=</span><span class="st">"y"</span>,</span>
<span id="cb9-151"><a href="#cb9-151" aria-hidden="true" tabindex="-1"></a> <span class="co"># trans = \(x){exp(x)^2},</span></span>
<span id="cb9-152"><a href="#cb9-152" aria-hidden="true" tabindex="-1"></a> ...) <span class="sc">+</span></span>
<span id="cb9-153"><a href="#cb9-153" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="co">#title = "GAM fits of the effect of surprisal on reading time",</span></span>
<span id="cb9-154"><a href="#cb9-154" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> glue<span class="sc">::</span><span class="fu">glue</span>(<span class="st">"Partial effect of surprisal on {which_descr}"</span>)) <span class="sc">+</span></span>
<span id="cb9-155"><a href="#cb9-155" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(</span>
<span id="cb9-156"><a href="#cb9-156" aria-hidden="true" tabindex="-1"></a> <span class="at">strip.placement=</span><span class="st">'outside'</span>, <span class="at">strip.text.x =</span> <span class="fu">element_blank</span>(),</span>
<span id="cb9-157"><a href="#cb9-157" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.position =</span> <span class="fu">c</span>(.<span class="dv">08</span>,.<span class="dv">7</span>),</span>
<span id="cb9-158"><a href="#cb9-158" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.background =</span> <span class="fu">element_rect</span>(<span class="at">size =</span> <span class="dv">0</span>, <span class="at">color =</span> <span class="st">"white"</span>)) <span class="sc">+</span></span>
<span id="cb9-159"><a href="#cb9-159" aria-hidden="true" tabindex="-1"></a> <span class="co"># guides(linetype = ltyguide) +</span></span>
<span id="cb9-160"><a href="#cb9-160" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_y_continuous</span>(<span class="at">breaks =</span> ybreaks, <span class="at">position =</span> <span class="st">"right"</span>)</span>
<span id="cb9-161"><a href="#cb9-161" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb9-162"><a href="#cb9-162" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb9-163"><a href="#cb9-163" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb9-164"><a href="#cb9-164" aria-hidden="true" tabindex="-1"></a>plot_easy_both_patch <span class="ot"><-</span> <span class="cf">function</span>(</span>
<span id="cb9-165"><a href="#cb9-165" aria-hidden="true" tabindex="-1"></a> data_to_plot, data_to_plot_control,</span>
<span id="cb9-166"><a href="#cb9-166" aria-hidden="true" tabindex="-1"></a> <span class="at">order_models_by_PPL =</span> <span class="cn">TRUE</span>,</span>
<span id="cb9-167"><a href="#cb9-167" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> context_lens, <span class="at">density_df =</span> surprisal_densities, ...) {</span>
<span id="cb9-168"><a href="#cb9-168" aria-hidden="true" tabindex="-1"></a> p_mean <span class="ot"><-</span> <span class="fu">plot_easy_mean_patch</span>(data_to_plot, data_to_plot_control,</span>
<span id="cb9-169"><a href="#cb9-169" aria-hidden="true" tabindex="-1"></a> <span class="at">order_models_by_PPL =</span> order_models_by_PPL,</span>
<span id="cb9-170"><a href="#cb9-170" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> ctx_lens, <span class="at">density_df =</span> density_df, ...) <span class="sc">+</span> </span>
<span id="cb9-171"><a href="#cb9-171" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(<span class="at">axis.title.x =</span> <span class="fu">element_blank</span>(), <span class="at">axis.text.x =</span> <span class="fu">element_blank</span>())</span>
<span id="cb9-172"><a href="#cb9-172" aria-hidden="true" tabindex="-1"></a> p_var <span class="ot"><-</span> <span class="fu">plot_easy_var_patch</span>(data_to_plot, data_to_plot_control,</span>
<span id="cb9-173"><a href="#cb9-173" aria-hidden="true" tabindex="-1"></a> <span class="at">order_models_by_PPL =</span> order_models_by_PPL,</span>
<span id="cb9-174"><a href="#cb9-174" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> ctx_lens, <span class="at">density_df =</span> density_df, ...)</span>
<span id="cb9-175"><a href="#cb9-175" aria-hidden="true" tabindex="-1"></a> p_mean <span class="sc">+</span> p_var <span class="sc">+</span></span>
<span id="cb9-176"><a href="#cb9-176" aria-hidden="true" tabindex="-1"></a> patchwork<span class="sc">::</span><span class="fu">plot_layout</span>(<span class="at">ncol =</span> <span class="dv">1</span>, <span class="at">nrow =</span> <span class="dv">2</span>, <span class="at">heights =</span> <span class="fu">c</span>(<span class="dv">4</span>,<span class="dv">3</span>)) <span class="sc">+</span></span>
<span id="cb9-177"><a href="#cb9-177" aria-hidden="true" tabindex="-1"></a> patchwork<span class="sc">::</span><span class="fu">plot_annotation</span>(</span>
<span id="cb9-178"><a href="#cb9-178" aria-hidden="true" tabindex="-1"></a> <span class="at">title =</span> <span class="st">"GAM fits of the effect of surprisal on reading time"</span></span>
<span id="cb9-179"><a href="#cb9-179" aria-hidden="true" tabindex="-1"></a> )</span>
<span id="cb9-180"><a href="#cb9-180" aria-hidden="true" tabindex="-1"></a>}</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
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</div>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb10"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb10-1"><a href="#cb10-1" aria-hidden="true" tabindex="-1"></a>density_color <span class="ot"><-</span> <span class="st">"grey"</span></span>
<span id="cb10-2"><a href="#cb10-2" aria-hidden="true" tabindex="-1"></a>linear_control_color <span class="ot"><-</span> <span class="st">"black"</span></span>
<span id="cb10-3"><a href="#cb10-3" aria-hidden="true" tabindex="-1"></a>linear_control_lty <span class="ot"><-</span> <span class="st">"13"</span></span>
<span id="cb10-4"><a href="#cb10-4" aria-hidden="true" tabindex="-1"></a>linear_control_lsize <span class="ot"><-</span> .<span class="dv">25</span></span>
<span id="cb10-5"><a href="#cb10-5" aria-hidden="true" tabindex="-1"></a>variance_lty <span class="ot"><-</span> <span class="st">"31"</span></span>
<span id="cb10-6"><a href="#cb10-6" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb10-7"><a href="#cb10-7" aria-hidden="true" tabindex="-1"></a>additional_control_color <span class="ot"><-</span> <span class="st">"grey"</span></span>
<span id="cb10-8"><a href="#cb10-8" aria-hidden="true" tabindex="-1"></a>additional_control_lty <span class="ot"><-</span> <span class="st">"33"</span></span>
<span id="cb10-9"><a href="#cb10-9" aria-hidden="true" tabindex="-1"></a>additional_control_lsize <span class="ot"><-</span> .<span class="dv">25</span></span>
<span id="cb10-10"><a href="#cb10-10" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb10-11"><a href="#cb10-11" aria-hidden="true" tabindex="-1"></a><span class="fu">plot_easy_mean_patch</span>(data_to_plot_var0_gauss_wprev, data_to_plot_lin0var_wprev,</span>
<span id="cb10-12"><a href="#cb10-12" aria-hidden="true" tabindex="-1"></a> <span class="at">meanbreaks =</span> <span class="fu">seq</span>(<span class="sc">-</span><span class="dv">25</span>, <span class="dv">650</span>, <span class="dv">50</span>)) <span class="sc">+</span></span>
<span id="cb10-13"><a href="#cb10-13" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="at">y=</span><span class="st">"RT (ms) ±2*SE"</span>,</span>
<span id="cb10-14"><a href="#cb10-14" aria-hidden="true" tabindex="-1"></a> <span class="at">title =</span> <span class="st">"Effect of surprisal on mean RT"</span>,</span>
<span id="cb10-15"><a href="#cb10-15" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> <span class="st">"GAMs with constant variance assumption"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
<p><img src="make_figures_files/figure-html/unnamed-chunk-3-1.png" class="img-fluid" width="672"></p>
</div>
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb11"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb11-1"><a href="#cb11-1" aria-hidden="true" tabindex="-1"></a><span class="do">### FIG FOR PAPER (3 contexts)</span></span>
<span id="cb11-2"><a href="#cb11-2" aria-hidden="true" tabindex="-1"></a><span class="fu">ggsave</span>(</span>
<span id="cb11-3"><a href="#cb11-3" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(figsdir, <span class="st">"gauss0var"</span>, context_pref, <span class="st">"_wprev"</span>, <span class="st">"_wlinear0var_both_patch.pdf"</span>),</span>
<span id="cb11-4"><a href="#cb11-4" aria-hidden="true" tabindex="-1"></a> <span class="at">width =</span> <span class="fl">10.5</span>, <span class="at">height =</span> <span class="fu">ifelse</span>(twocontexts, <span class="fl">3.5</span>, <span class="fl">4.5</span>))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb12"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb12-1"><a href="#cb12-1" aria-hidden="true" tabindex="-1"></a>additional_control_color <span class="ot"><-</span> <span class="dv">3</span></span>
<span id="cb12-2"><a href="#cb12-2" aria-hidden="true" tabindex="-1"></a>additional_control_lty <span class="ot"><-</span> <span class="st">"33"</span></span>
<span id="cb12-3"><a href="#cb12-3" aria-hidden="true" tabindex="-1"></a>additional_control_lsize <span class="ot"><-</span> .<span class="dv">25</span></span>
<span id="cb12-4"><a href="#cb12-4" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb12-5"><a href="#cb12-5" aria-hidden="true" tabindex="-1"></a>plot_easy_mean_patch_3 <span class="ot"><-</span> <span class="cf">function</span>(</span>
<span id="cb12-6"><a href="#cb12-6" aria-hidden="true" tabindex="-1"></a> data_to_plot, data_to_plot_control, data_to_plot_control2,</span>
<span id="cb12-7"><a href="#cb12-7" aria-hidden="true" tabindex="-1"></a> <span class="at">order_models_by_PPL =</span> <span class="cn">TRUE</span>,</span>
<span id="cb12-8"><a href="#cb12-8" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> context_lens, <span class="at">density_df =</span> surprisal_densities,</span>
<span id="cb12-9"><a href="#cb12-9" aria-hidden="true" tabindex="-1"></a> <span class="at">meanbreaks =</span> <span class="fu">seq</span>(<span class="sc">-</span><span class="dv">25</span>, <span class="dv">500</span>, <span class="dv">25</span>), ...){</span>
<span id="cb12-10"><a href="#cb12-10" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (order_models_by_PPL) {</span>
<span id="cb12-11"><a href="#cb12-11" aria-hidden="true" tabindex="-1"></a> data_to_plot<span class="sc">$</span>model <span class="ot"><-</span> <span class="fu">factor</span>(</span>
<span id="cb12-12"><a href="#cb12-12" aria-hidden="true" tabindex="-1"></a> data_to_plot<span class="sc">$</span>model, <span class="at">levels =</span> models_in_desc_PPL_order)</span>
<span id="cb12-13"><a href="#cb12-13" aria-hidden="true" tabindex="-1"></a> data_to_plot_control<span class="sc">$</span>model <span class="ot"><-</span> <span class="fu">factor</span>(</span>
<span id="cb12-14"><a href="#cb12-14" aria-hidden="true" tabindex="-1"></a> data_to_plot_control<span class="sc">$</span>model, <span class="at">levels =</span> models_in_desc_PPL_order)</span>
<span id="cb12-15"><a href="#cb12-15" aria-hidden="true" tabindex="-1"></a> }</span>
<span id="cb12-16"><a href="#cb12-16" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb12-17"><a href="#cb12-17" aria-hidden="true" tabindex="-1"></a> which_descr <span class="ot"><-</span> <span class="st">"mean RT"</span></span>
<span id="cb12-18"><a href="#cb12-18" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="ot"><-</span> data_to_plot <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"mean"</span>)</span>
<span id="cb12-19"><a href="#cb12-19" aria-hidden="true" tabindex="-1"></a> data_to_plot_control <span class="ot"><-</span> data_to_plot_control <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"mean"</span>)</span>
<span id="cb12-20"><a href="#cb12-20" aria-hidden="true" tabindex="-1"></a> data_to_plot_control2 <span class="ot"><-</span> data_to_plot_control2 <span class="sc">%>%</span> <span class="fu">filter</span>(est_type<span class="sc">==</span><span class="st">"mean"</span>)</span>
<span id="cb12-21"><a href="#cb12-21" aria-hidden="true" tabindex="-1"></a> space <span class="ot"><-</span> <span class="st">"free"</span>; ybreaks <span class="ot"><-</span> meanbreaks</span>
<span id="cb12-22"><a href="#cb12-22" aria-hidden="true" tabindex="-1"></a> static_lty <span class="ot">=</span> <span class="st">"solid"</span>; ltyguide <span class="ot"><-</span> <span class="st">"none"</span></span>
<span id="cb12-23"><a href="#cb12-23" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="sc">%>%</span></span>
<span id="cb12-24"><a href="#cb12-24" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens) <span class="sc">%>%</span></span>
<span id="cb12-25"><a href="#cb12-25" aria-hidden="true" tabindex="-1"></a> <span class="fu">plot_data</span>(<span class="at">controls =</span> data_to_plot_control <span class="sc">%>%</span></span>
<span id="cb12-26"><a href="#cb12-26" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens),</span>
<span id="cb12-27"><a href="#cb12-27" aria-hidden="true" tabindex="-1"></a> <span class="at">additional_controls =</span> data_to_plot_control2 <span class="sc">%>%</span></span>
<span id="cb12-28"><a href="#cb12-28" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens),</span>
<span id="cb12-29"><a href="#cb12-29" aria-hidden="true" tabindex="-1"></a> <span class="at">density_df =</span> density_df <span class="sc">%>%</span> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> ctx_lens),</span>
<span id="cb12-30"><a href="#cb12-30" aria-hidden="true" tabindex="-1"></a> <span class="at">static_lty =</span> static_lty,</span>
<span id="cb12-31"><a href="#cb12-31" aria-hidden="true" tabindex="-1"></a> <span class="at">rows =</span></span>
<span id="cb12-32"><a href="#cb12-32" aria-hidden="true" tabindex="-1"></a> context_len <span class="co">#+ est_type</span></span>
<span id="cb12-33"><a href="#cb12-33" aria-hidden="true" tabindex="-1"></a> <span class="sc">~</span> model,</span>
<span id="cb12-34"><a href="#cb12-34" aria-hidden="true" tabindex="-1"></a> <span class="at">scales=</span><span class="st">"free"</span>, <span class="at">space=</span>space,</span>
<span id="cb12-35"><a href="#cb12-35" aria-hidden="true" tabindex="-1"></a> <span class="at">switch=</span><span class="st">"y"</span>,</span>
<span id="cb12-36"><a href="#cb12-36" aria-hidden="true" tabindex="-1"></a> <span class="at">ylab =</span> <span class="st">"mean RT ±2*SE"</span>,</span>
<span id="cb12-37"><a href="#cb12-37" aria-hidden="true" tabindex="-1"></a> ...) <span class="sc">+</span></span>
<span id="cb12-38"><a href="#cb12-38" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="co">#title = "GAM fits of the effect of surprisal on reading time",</span></span>
<span id="cb12-39"><a href="#cb12-39" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> glue<span class="sc">::</span><span class="fu">glue</span>(<span class="st">"Partial effect of surprisal on {which_descr}"</span>)) <span class="sc">+</span></span>
<span id="cb12-40"><a href="#cb12-40" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(</span>
<span id="cb12-41"><a href="#cb12-41" aria-hidden="true" tabindex="-1"></a> <span class="at">strip.placement=</span><span class="st">'outside'</span>,</span>
<span id="cb12-42"><a href="#cb12-42" aria-hidden="true" tabindex="-1"></a> <span class="co"># axis.title.x = element_blank(), axis.text.x = element_blank(),</span></span>
<span id="cb12-43"><a href="#cb12-43" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.position =</span> <span class="fu">c</span>(.<span class="dv">08</span>,.<span class="dv">7</span>),</span>
<span id="cb12-44"><a href="#cb12-44" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.background =</span> <span class="fu">element_rect</span>(<span class="at">size =</span> <span class="dv">0</span>, <span class="at">color =</span> <span class="st">"white"</span>)) <span class="sc">+</span></span>
<span id="cb12-45"><a href="#cb12-45" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_y_continuous</span>(<span class="at">breaks =</span> ybreaks, <span class="at">position =</span> <span class="st">"right"</span>) <span class="sc">+</span></span>
<span id="cb12-46"><a href="#cb12-46" aria-hidden="true" tabindex="-1"></a> <span class="fu">guides</span>(<span class="at">linetype =</span> ltyguide)</span>
<span id="cb12-47"><a href="#cb12-47" aria-hidden="true" tabindex="-1"></a>}</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb13"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb13-1"><a href="#cb13-1" aria-hidden="true" tabindex="-1"></a><span class="fu">plot_easy_mean_patch_3</span>(</span>
<span id="cb13-2"><a href="#cb13-2" aria-hidden="true" tabindex="-1"></a> data_to_plot_var0_gauss_w3prev,</span>
<span id="cb13-3"><a href="#cb13-3" aria-hidden="true" tabindex="-1"></a> data_to_plot_lin0var_wprev,</span>
<span id="cb13-4"><a href="#cb13-4" aria-hidden="true" tabindex="-1"></a> data_to_plot_var0_gauss_wprev <span class="sc">%>%</span> <span class="fu">filter</span>(est_shifted <span class="sc"><=</span> <span class="dv">500</span>),</span>
<span id="cb13-5"><a href="#cb13-5" aria-hidden="true" tabindex="-1"></a> <span class="at">meanbreaks =</span> <span class="fu">seq</span>(<span class="sc">-</span><span class="dv">25</span>, <span class="dv">650</span>, <span class="dv">50</span>)) <span class="sc">+</span></span>
<span id="cb13-6"><a href="#cb13-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="at">y=</span><span class="st">"RT (ms) ±2*SE"</span>,</span>
<span id="cb13-7"><a href="#cb13-7" aria-hidden="true" tabindex="-1"></a> <span class="at">title =</span> <span class="st">"Effect of surprisal on mean RT, GAMs with constant variance"</span>,</span>
<span id="cb13-8"><a href="#cb13-8" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> <span class="st">"comparing using 3 words for spillover (solid) words to just 1 (dashed)"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
<p><img src="make_figures_files/figure-html/unnamed-chunk-5-1.png" class="img-fluid" width="672"></p>
</div>
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb14"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb14-1"><a href="#cb14-1" aria-hidden="true" tabindex="-1"></a><span class="do">### FIG FOR PAPER (3 contexts)</span></span>
<span id="cb14-2"><a href="#cb14-2" aria-hidden="true" tabindex="-1"></a><span class="fu">ggsave</span>(</span>
<span id="cb14-3"><a href="#cb14-3" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(figsdir, <span class="st">"gauss0var"</span>, context_pref, <span class="st">"_wprev_vs_wprev3_lin0var.pdf"</span>),</span>
<span id="cb14-4"><a href="#cb14-4" aria-hidden="true" tabindex="-1"></a> <span class="at">width =</span> <span class="fl">10.5</span>, <span class="at">height =</span> <span class="fu">ifelse</span>(twocontexts, <span class="fl">3.5</span>, <span class="fl">4.5</span>))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<p>Main plot figure for paper:</p>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb15"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb15-1"><a href="#cb15-1" aria-hidden="true" tabindex="-1"></a><span class="fu">plot_easy_both_patch</span>(data_to_plot_smooth_wprevm, data_to_plot_linear_wprevm)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
<p><img src="make_figures_files/figure-html/unnamed-chunk-6-1.png" class="img-fluid" width="672"></p>
</div>
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb16"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb16-1"><a href="#cb16-1" aria-hidden="true" tabindex="-1"></a><span class="do">### FIG FOR PAPER (2 and 3 contexts)</span></span>
<span id="cb16-2"><a href="#cb16-2" aria-hidden="true" tabindex="-1"></a><span class="fu">ggsave</span>(</span>
<span id="cb16-3"><a href="#cb16-3" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(figsdir, <span class="st">"gaulss"</span>, context_pref, <span class="st">"_wprevm"</span>, <span class="st">"_wlinear_both_patch.pdf"</span>),</span>
<span id="cb16-4"><a href="#cb16-4" aria-hidden="true" tabindex="-1"></a> <span class="at">width =</span> <span class="fl">10.5</span>, <span class="at">height =</span> <span class="fu">ifelse</span>(twocontexts, <span class="dv">6</span>, <span class="fl">7.5</span>))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
</section>
</section>
<section id="superlinearity" class="level2">
<h2 class="anchored" data-anchor-id="superlinearity">Superlinearity</h2>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb17"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb17-1"><a href="#cb17-1" aria-hidden="true" tabindex="-1"></a>make_half_linears_dataset <span class="ot"><-</span> <span class="cf">function</span>(data_to_plot, <span class="at">breakpoint=</span><span class="fl">0.5</span>, <span class="at">se.mult=</span><span class="fl">1.96</span>) {</span>
<span id="cb17-2"><a href="#cb17-2" aria-hidden="true" tabindex="-1"></a> <span class="co">#" fit simple linear models to the smooth fits before and after the breakpoint</span></span>
<span id="cb17-3"><a href="#cb17-3" aria-hidden="true" tabindex="-1"></a> <span class="co">#" breakpoint should be between 0 and 1 (proportion of max surprisal to break at)</span></span>
<span id="cb17-4"><a href="#cb17-4" aria-hidden="true" tabindex="-1"></a> data_to_plot <span class="sc">%>%</span> </span>
<span id="cb17-5"><a href="#cb17-5" aria-hidden="true" tabindex="-1"></a> <span class="fu">group_by</span>(model, context_len) <span class="sc">%>%</span> </span>
<span id="cb17-6"><a href="#cb17-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">secondhalf =</span> surprisal <span class="sc">></span> <span class="fu">max</span>(surprisal) <span class="sc">*</span> breakpoint) <span class="sc">%>%</span></span>
<span id="cb17-7"><a href="#cb17-7" aria-hidden="true" tabindex="-1"></a> <span class="fu">group_by</span>(secondhalf, est_type, <span class="at">.add =</span> <span class="cn">TRUE</span>) <span class="sc">%>%</span></span>
<span id="cb17-8"><a href="#cb17-8" aria-hidden="true" tabindex="-1"></a> <span class="fu">do</span>(<span class="at">f =</span> broom<span class="sc">::</span><span class="fu">tidy</span>(<span class="fu">lm</span>(est <span class="sc">~</span> surprisal, <span class="at">weights =</span> <span class="dv">1</span><span class="sc">/</span><span class="fu">sqrt</span>(se), <span class="at">data =</span> .))) <span class="sc">%>%</span></span>
<span id="cb17-9"><a href="#cb17-9" aria-hidden="true" tabindex="-1"></a> tidyr<span class="sc">::</span><span class="fu">unnest</span>(f) <span class="sc">%>%</span></span>
<span id="cb17-10"><a href="#cb17-10" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">lower =</span> estimate <span class="sc">-</span> se.mult <span class="sc">*</span> std.error,</span>
<span id="cb17-11"><a href="#cb17-11" aria-hidden="true" tabindex="-1"></a> <span class="at">upper =</span> estimate <span class="sc">+</span> se.mult <span class="sc">*</span> std.error) <span class="sc">%>%</span></span>
<span id="cb17-12"><a href="#cb17-12" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(term <span class="sc">==</span> <span class="st">"surprisal"</span>) </span>
<span id="cb17-13"><a href="#cb17-13" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb17-14"><a href="#cb17-14" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb17-15"><a href="#cb17-15" aria-hidden="true" tabindex="-1"></a><span class="co"># half_linears3 <- make_half_linears_dataset(data_to_plot_smooth_wprevm, breakpoint=1/3)</span></span>
<span id="cb17-16"><a href="#cb17-16" aria-hidden="true" tabindex="-1"></a>half_linears2 <span class="ot"><-</span> <span class="fu">make_half_linears_dataset</span>(data_to_plot_smooth_wprevm, <span class="at">breakpoint=</span><span class="dv">1</span><span class="sc">/</span><span class="dv">2</span>)</span>
<span id="cb17-17"><a href="#cb17-17" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb17-18"><a href="#cb17-18" aria-hidden="true" tabindex="-1"></a><span class="co"># For the datasubset_lessN versions (just GPT3d for now)</span></span>
<span id="cb17-19"><a href="#cb17-19" aria-hidden="true" tabindex="-1"></a>half_linears2_less6 <span class="ot"><-</span> <span class="fu">make_half_linears_dataset</span>(</span>
<span id="cb17-20"><a href="#cb17-20" aria-hidden="true" tabindex="-1"></a> data_to_plot_datasubsetless6_smooth_wprevm, <span class="at">breakpoint=</span><span class="dv">1</span><span class="sc">/</span><span class="dv">2</span>)</span>
<span id="cb17-21"><a href="#cb17-21" aria-hidden="true" tabindex="-1"></a>half_linears2_less12 <span class="ot"><-</span> <span class="fu">make_half_linears_dataset</span>(</span>
<span id="cb17-22"><a href="#cb17-22" aria-hidden="true" tabindex="-1"></a> data_to_plot_datasubsetless12_smooth_wprevm, <span class="at">breakpoint=</span><span class="dv">1</span><span class="sc">/</span><span class="dv">2</span>)</span>
<span id="cb17-23"><a href="#cb17-23" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb17-24"><a href="#cb17-24" aria-hidden="true" tabindex="-1"></a>make_halflinears_diffs_dataset <span class="ot"><-</span> <span class="cf">function</span>(half_linears_dataset) {</span>
<span id="cb17-25"><a href="#cb17-25" aria-hidden="true" tabindex="-1"></a> half_linears_dataset <span class="sc">%>%</span> <span class="fu">group_by</span>(model, context_len, est_type) <span class="sc">%>%</span></span>
<span id="cb17-26"><a href="#cb17-26" aria-hidden="true" tabindex="-1"></a> <span class="fu">do</span>(<span class="at">diff_slope_hi_v_low =</span> </span>
<span id="cb17-27"><a href="#cb17-27" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(., secondhalf<span class="sc">==</span><span class="cn">TRUE</span>)<span class="sc">$</span>estimate <span class="sc">-</span> <span class="fu">filter</span>(., secondhalf<span class="sc">==</span><span class="cn">FALSE</span>)<span class="sc">$</span>estimate,</span>
<span id="cb17-28"><a href="#cb17-28" aria-hidden="true" tabindex="-1"></a> <span class="at">sum_std.error =</span> </span>
<span id="cb17-29"><a href="#cb17-29" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(., secondhalf<span class="sc">==</span><span class="cn">TRUE</span>)<span class="sc">$</span>std.error <span class="sc">+</span> <span class="fu">filter</span>(., secondhalf<span class="sc">==</span><span class="cn">FALSE</span>)<span class="sc">$</span>std.error</span>
<span id="cb17-30"><a href="#cb17-30" aria-hidden="true" tabindex="-1"></a> ) <span class="sc">%>%</span></span>
<span id="cb17-31"><a href="#cb17-31" aria-hidden="true" tabindex="-1"></a> tidyr<span class="sc">::</span><span class="fu">unnest</span>(<span class="fu">c</span>(diff_slope_hi_v_low, sum_std.error)) <span class="sc">%>%</span></span>
<span id="cb17-32"><a href="#cb17-32" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">upper =</span> diff_slope_hi_v_low <span class="sc">+</span> <span class="fl">1.96</span> <span class="sc">*</span> sum_std.error,</span>
<span id="cb17-33"><a href="#cb17-33" aria-hidden="true" tabindex="-1"></a> <span class="at">lower =</span> diff_slope_hi_v_low <span class="sc">-</span> <span class="fl">1.96</span> <span class="sc">*</span> sum_std.error)</span>
<span id="cb17-34"><a href="#cb17-34" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb17-35"><a href="#cb17-35" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb17-36"><a href="#cb17-36" aria-hidden="true" tabindex="-1"></a>halflinear_diffs2 <span class="ot"><-</span> <span class="fu">make_halflinears_diffs_dataset</span>(half_linears2)</span>
<span id="cb17-37"><a href="#cb17-37" aria-hidden="true" tabindex="-1"></a><span class="co"># halflinear_diffs3 <- make_halflinears_diffs_dataset(half_linears3)</span></span>
<span id="cb17-38"><a href="#cb17-38" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb17-39"><a href="#cb17-39" aria-hidden="true" tabindex="-1"></a><span class="do">## Save halflinear data</span></span>
<span id="cb17-40"><a href="#cb17-40" aria-hidden="true" tabindex="-1"></a><span class="co"># halflinear_diffs2 %>% readr::write_csv("natural-stories-surprisals/gaulss_halflinear_diffs2.csv")</span></span>
<span id="cb17-41"><a href="#cb17-41" aria-hidden="true" tabindex="-1"></a><span class="co"># halflinear_diffs3 %>% readr::write_csv("natural-stories-surprisals/gaulss_halflinear_diffs3.csv")</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb18"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb18-1"><a href="#cb18-1" aria-hidden="true" tabindex="-1"></a><span class="do">## Read in halflinear data</span></span>
<span id="cb18-2"><a href="#cb18-2" aria-hidden="true" tabindex="-1"></a><span class="co"># halflinear_diffs2 <- load_in_data("natural-stories-surprisals/gaulss_halflinear_diffs2.csv")</span></span>
<span id="cb18-3"><a href="#cb18-3" aria-hidden="true" tabindex="-1"></a><span class="co"># halflinear_diffs3 <- load_in_data("natural-stories-surprisals/gaulss_halflinear_diffs3.csv")</span></span>
<span id="cb18-4"><a href="#cb18-4" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb18-5"><a href="#cb18-5" aria-hidden="true" tabindex="-1"></a>halflinear_diffs2 <span class="sc">%>%</span> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> context_lens) <span class="sc">%>%</span> </span>
<span id="cb18-6"><a href="#cb18-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> model, <span class="at">y =</span> diff_slope_hi_v_low, <span class="at">shape =</span> est_type,</span>
<span id="cb18-7"><a href="#cb18-7" aria-hidden="true" tabindex="-1"></a> <span class="at">ymin =</span> lower, <span class="at">ymax =</span> upper, <span class="at">color =</span> context_len)) <span class="sc">+</span></span>
<span id="cb18-8"><a href="#cb18-8" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_hline</span>(<span class="at">yintercept=</span><span class="dv">0</span>, <span class="at">color=</span><span class="st">"gray"</span>) <span class="sc">+</span></span>
<span id="cb18-9"><a href="#cb18-9" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_errorbar</span>(<span class="at">width =</span> .<span class="dv">25</span>) <span class="sc">+</span> <span class="fu">geom_point</span>(<span class="at">size=</span><span class="dv">3</span>, <span class="at">alpha =</span> .<span class="dv">4</span>) <span class="sc">+</span></span>
<span id="cb18-10"><a href="#cb18-10" aria-hidden="true" tabindex="-1"></a> <span class="fu">facet_grid</span>(context_len <span class="sc">+</span>est_type<span class="sc">~</span> model, <span class="at">labeller =</span> my_labeller, <span class="at">scales =</span> <span class="st">"free"</span>) <span class="sc">+</span></span>
<span id="cb18-11"><a href="#cb18-11" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_fill_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb18-12"><a href="#cb18-12" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb18-13"><a href="#cb18-13" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_shape_discrete</span>(<span class="at">name =</span> <span class="st">""</span>, <span class="at">labels =</span> est_type_labs) <span class="sc">+</span></span>
<span id="cb18-14"><a href="#cb18-14" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(</span>
<span id="cb18-15"><a href="#cb18-15" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.position =</span> <span class="fu">c</span>(<span class="fl">0.08</span>, <span class="fl">0.7</span>),</span>
<span id="cb18-16"><a href="#cb18-16" aria-hidden="true" tabindex="-1"></a> <span class="at">axis.text.x =</span> <span class="fu">element_blank</span>(),</span>
<span id="cb18-17"><a href="#cb18-17" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.background =</span> <span class="fu">element_rect</span>(<span class="at">size =</span> <span class="dv">0</span>, <span class="at">color =</span> <span class="st">"white"</span>)) <span class="sc">+</span></span>
<span id="cb18-18"><a href="#cb18-18" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(</span>
<span id="cb18-19"><a href="#cb18-19" aria-hidden="true" tabindex="-1"></a> <span class="at">x =</span> <span class="st">"model"</span>,</span>
<span id="cb18-20"><a href="#cb18-20" aria-hidden="true" tabindex="-1"></a> <span class="at">y =</span> <span class="st">"slope at high surprisal - slope at low surprisal"</span>,</span>
<span id="cb18-21"><a href="#cb18-21" aria-hidden="true" tabindex="-1"></a> <span class="at">title =</span> <span class="st">"Superlinearity by LM"</span>,</span>
<span id="cb18-22"><a href="#cb18-22" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> <span class="st">"Difference in slope of smooth predictions for high vs. low surprisal"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
<p><img src="make_figures_files/figure-html/unnamed-chunk-8-1.png" class="img-fluid" width="672"></p>
</div>
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb19"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb19-1"><a href="#cb19-1" aria-hidden="true" tabindex="-1"></a><span class="co"># ggsave(</span></span>
<span id="cb19-2"><a href="#cb19-2" aria-hidden="true" tabindex="-1"></a><span class="co"># paste0(</span></span>
<span id="cb19-3"><a href="#cb19-3" aria-hidden="true" tabindex="-1"></a><span class="co"># figsdir, "", context_pref, "gaulss_halflinear_diffs3.pdf"),</span></span>
<span id="cb19-4"><a href="#cb19-4" aria-hidden="true" tabindex="-1"></a><span class="co"># width = 5, height = 4)</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<section id="cutoffs-most-surprising-words" class="level4">
<h4 class="anchored" data-anchor-id="cutoffs-most-surprising-words">Cutoffs most surprising words</h4>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb20"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb20-1"><a href="#cb20-1" aria-hidden="true" tabindex="-1"></a>data_to_plot_multicutoffs <span class="ot"><-</span> <span class="fu">bind_rows</span>(</span>
<span id="cb20-2"><a href="#cb20-2" aria-hidden="true" tabindex="-1"></a> data_to_plot_smooth_wprevm, <span class="co"># cutoff=NA for these rows</span></span>
<span id="cb20-3"><a href="#cb20-3" aria-hidden="true" tabindex="-1"></a> data_to_plot_datasubsetless6_smooth_wprevm,</span>
<span id="cb20-4"><a href="#cb20-4" aria-hidden="true" tabindex="-1"></a> data_to_plot_datasubsetless12_smooth_wprevm</span>
<span id="cb20-5"><a href="#cb20-5" aria-hidden="true" tabindex="-1"></a> ) <span class="sc">%>%</span> </span>
<span id="cb20-6"><a href="#cb20-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">cutoff =</span> forcats<span class="sc">::</span><span class="fu">fct_rev</span>(forcats<span class="sc">::</span><span class="fu">as_factor</span>(cutoff)))</span>
<span id="cb20-7"><a href="#cb20-7" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb20-8"><a href="#cb20-8" aria-hidden="true" tabindex="-1"></a>compare_one_model_multi_cutoffs_surprisal<span class="ot"><-</span><span class="cf">function</span>(</span>
<span id="cb20-9"><a href="#cb20-9" aria-hidden="true" tabindex="-1"></a> data_to_plot_multicutoffs, </span>
<span id="cb20-10"><a href="#cb20-10" aria-hidden="true" tabindex="-1"></a> <span class="at">use_shifted_est =</span> T, <span class="at">trans =</span> I, <span class="at">se.mult =</span> <span class="fl">1.96</span>,</span>
<span id="cb20-11"><a href="#cb20-11" aria-hidden="true" tabindex="-1"></a> <span class="at">ctx_lens =</span> context_lens, <span class="at">density_df =</span> surprisal_densities, </span>
<span id="cb20-12"><a href="#cb20-12" aria-hidden="true" tabindex="-1"></a> <span class="at">ylab =</span> <span class="st">"fitted effect</span><span class="sc">\n</span><span class="st">estimate (+ intercept) ±2*SE"</span>,...) {</span>
<span id="cb20-13"><a href="#cb20-13" aria-hidden="true" tabindex="-1"></a> </span>
<span id="cb20-14"><a href="#cb20-14" aria-hidden="true" tabindex="-1"></a> d <span class="ot"><-</span> data_to_plot_multicutoffs <span class="sc">%>%</span> </span>
<span id="cb20-15"><a href="#cb20-15" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(model<span class="sc">==</span><span class="st">"GPT3-davinci"</span>, context_len<span class="sc">==</span><span class="st">"max"</span>, est_type <span class="sc">==</span> <span class="st">"mean"</span>)</span>
<span id="cb20-16"><a href="#cb20-16" aria-hidden="true" tabindex="-1"></a> l<span class="ot"><-</span> <span class="fu">levels</span>(d<span class="sc">$</span>cutoff) <span class="sc">%>%</span> <span class="fu">as.numeric</span>()</span>
<span id="cb20-17"><a href="#cb20-17" aria-hidden="true" tabindex="-1"></a> <span class="cf">if</span> (use_shifted_est) d <span class="ot"><-</span> <span class="fu">mutate</span>(d, <span class="at">est =</span> est_shifted)</span>
<span id="cb20-18"><a href="#cb20-18" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> d <span class="sc">%>%</span></span>
<span id="cb20-19"><a href="#cb20-19" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> surprisal, <span class="at">y =</span> <span class="fu">trans</span>(est),</span>
<span id="cb20-20"><a href="#cb20-20" aria-hidden="true" tabindex="-1"></a> <span class="at">color=</span>cutoff, <span class="co">#linetype = !is.na(cutoff),</span></span>
<span id="cb20-21"><a href="#cb20-21" aria-hidden="true" tabindex="-1"></a> <span class="at">ymin =</span> <span class="fu">trans</span>(est <span class="sc">-</span> se.mult<span class="sc">*</span>se), <span class="at">ymax =</span> <span class="fu">trans</span>(est <span class="sc">+</span> se.mult<span class="sc">*</span>se)))</span>
<span id="cb20-22"><a href="#cb20-22" aria-hidden="true" tabindex="-1"></a> </span>
<span id="cb20-23"><a href="#cb20-23" aria-hidden="true" tabindex="-1"></a> max_surps <span class="ot"><-</span> d <span class="sc">%>%</span> </span>
<span id="cb20-24"><a href="#cb20-24" aria-hidden="true" tabindex="-1"></a> <span class="fu">group_by</span>(model, context_len, cutoff) <span class="sc">%>%</span> </span>
<span id="cb20-25"><a href="#cb20-25" aria-hidden="true" tabindex="-1"></a> <span class="fu">summarise</span>(<span class="at">max_surp=</span><span class="fu">max</span>(surprisal), <span class="at">.groups=</span><span class="st">"drop"</span>)</span>
<span id="cb20-26"><a href="#cb20-26" aria-hidden="true" tabindex="-1"></a> density_df <span class="ot"><-</span> density_df <span class="sc">%>%</span> </span>
<span id="cb20-27"><a href="#cb20-27" aria-hidden="true" tabindex="-1"></a> <span class="fu">right_join</span>(max_surps, <span class="at">by =</span> <span class="fu">c</span>(<span class="st">"model"</span>, <span class="st">"context_len"</span>)) <span class="sc">%>%</span> </span>
<span id="cb20-28"><a href="#cb20-28" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(surprisal <span class="sc"><=</span> max_surp)</span>
<span id="cb20-29"><a href="#cb20-29" aria-hidden="true" tabindex="-1"></a> density_ymin <span class="ot"><-</span> <span class="cf">if</span> (use_shifted_est) <span class="dv">312</span> <span class="cf">else</span> <span class="sc">-</span><span class="dv">10</span></span>
<span id="cb20-30"><a href="#cb20-30" aria-hidden="true" tabindex="-1"></a> density_df <span class="ot"><-</span> <span class="fu">mutate</span>(density_df, <span class="at">density =</span> <span class="dv">120</span> <span class="sc">*</span> density <span class="sc">+</span> density_ymin)</span>
<span id="cb20-31"><a href="#cb20-31" aria-hidden="true" tabindex="-1"></a> </span>
<span id="cb20-32"><a href="#cb20-32" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb20-33"><a href="#cb20-33" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_line</span>(<span class="at">data =</span> density_df <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">est_type =</span> <span class="st">"mean"</span>),</span>
<span id="cb20-34"><a href="#cb20-34" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">ymin =</span> <span class="cn">NULL</span>, <span class="at">ymax =</span> <span class="cn">NULL</span>, <span class="at">color =</span> cutoff,</span>
<span id="cb20-35"><a href="#cb20-35" aria-hidden="true" tabindex="-1"></a> <span class="at">y =</span> density, <span class="at">x =</span> surprisal),</span>
<span id="cb20-36"><a href="#cb20-36" aria-hidden="true" tabindex="-1"></a> <span class="at">linetype =</span> <span class="st">"solid"</span>, </span>
<span id="cb20-37"><a href="#cb20-37" aria-hidden="true" tabindex="-1"></a> <span class="at">alpha=</span>.<span class="dv">25</span></span>
<span id="cb20-38"><a href="#cb20-38" aria-hidden="true" tabindex="-1"></a> )</span>
<span id="cb20-39"><a href="#cb20-39" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span></span>
<span id="cb20-40"><a href="#cb20-40" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_ribbon</span>(<span class="at">data =</span> density_df <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">est_type =</span> <span class="st">"mean"</span>), <span class="at">inherit.aes =</span> F,</span>
<span id="cb20-41"><a href="#cb20-41" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">x =</span> surprisal, </span>
<span id="cb20-42"><a href="#cb20-42" aria-hidden="true" tabindex="-1"></a> <span class="at">lty =</span> <span class="cn">NULL</span>,</span>
<span id="cb20-43"><a href="#cb20-43" aria-hidden="true" tabindex="-1"></a> <span class="at">ymin =</span> density_ymin, <span class="at">ymax =</span> density),</span>
<span id="cb20-44"><a href="#cb20-44" aria-hidden="true" tabindex="-1"></a> <span class="at">fill =</span> density_color, <span class="at">size =</span> <span class="dv">2</span>,</span>
<span id="cb20-45"><a href="#cb20-45" aria-hidden="true" tabindex="-1"></a> <span class="at">alpha =</span> <span class="fl">0.35</span> <span class="sc">/</span> <span class="fu">length</span>(l))</span>
<span id="cb20-46"><a href="#cb20-46" aria-hidden="true" tabindex="-1"></a> </span>
<span id="cb20-47"><a href="#cb20-47" aria-hidden="true" tabindex="-1"></a> p <span class="ot"><-</span> p <span class="sc">+</span> </span>
<span id="cb20-48"><a href="#cb20-48" aria-hidden="true" tabindex="-1"></a> <span class="co"># ggplot2::annotate(</span></span>
<span id="cb20-49"><a href="#cb20-49" aria-hidden="true" tabindex="-1"></a> <span class="co"># geom="text", x=l+0.1, y=312+10, </span></span>
<span id="cb20-50"><a href="#cb20-50" aria-hidden="true" tabindex="-1"></a> <span class="co"># label=glue::glue("surprisal cutoff = {l}"), </span></span>
<span id="cb20-51"><a href="#cb20-51" aria-hidden="true" tabindex="-1"></a> <span class="co"># color= "grey", size=3, vjust=1, hjust=0) +</span></span>
<span id="cb20-52"><a href="#cb20-52" aria-hidden="true" tabindex="-1"></a> ggplot2<span class="sc">::</span><span class="fu">annotate</span>(</span>
<span id="cb20-53"><a href="#cb20-53" aria-hidden="true" tabindex="-1"></a> <span class="at">geom=</span><span class="st">"segment"</span>, <span class="at">x=</span>l, <span class="at">xend=</span>l, <span class="at">y=</span><span class="sc">-</span><span class="cn">Inf</span>, <span class="at">yend=</span><span class="dv">322</span>, <span class="at">color=</span><span class="st">"grey"</span>)</span>
<span id="cb20-54"><a href="#cb20-54" aria-hidden="true" tabindex="-1"></a> </span>
<span id="cb20-55"><a href="#cb20-55" aria-hidden="true" tabindex="-1"></a> p <span class="sc">+</span></span>
<span id="cb20-56"><a href="#cb20-56" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_line</span>(<span class="at">alpha =</span> <span class="fl">0.5</span>) <span class="sc">+</span></span>
<span id="cb20-57"><a href="#cb20-57" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_ribbon</span>(<span class="fu">aes</span>(<span class="at">y=</span><span class="cn">NULL</span>, <span class="at">color =</span> <span class="cn">NULL</span>, <span class="at">fill =</span> cutoff), <span class="at">alpha =</span> <span class="fl">0.2</span>, <span class="at">size =</span> <span class="dv">0</span>) <span class="sc">+</span></span>
<span id="cb20-58"><a href="#cb20-58" aria-hidden="true" tabindex="-1"></a> <span class="co"># scale_fill_discrete(name = "cutoff", breaks = c(NA, l), labels = c("none", l)) +</span></span>
<span id="cb20-59"><a href="#cb20-59" aria-hidden="true" tabindex="-1"></a> <span class="co"># scale_color_discrete(name = "cutoff", breaks = c(NA, l), labels = c("none", l)) +</span></span>
<span id="cb20-60"><a href="#cb20-60" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_fill_manual</span>(<span class="at">name =</span> <span class="st">"cutoff"</span>, <span class="at">values=</span><span class="fu">rev</span>(scales<span class="sc">::</span><span class="fu">hue_pal</span>()(<span class="dv">14</span>)), </span>
<span id="cb20-61"><a href="#cb20-61" aria-hidden="true" tabindex="-1"></a> <span class="at">breaks =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="cn">NA</span>), </span>
<span id="cb20-62"><a href="#cb20-62" aria-hidden="true" tabindex="-1"></a> <span class="at">labels =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="st">"none"</span>)) <span class="sc">+</span></span>
<span id="cb20-63"><a href="#cb20-63" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_manual</span>(<span class="at">name =</span> <span class="st">"cutoff"</span>, <span class="at">values=</span><span class="fu">rev</span>(scales<span class="sc">::</span><span class="fu">hue_pal</span>()(<span class="dv">14</span>)), </span>
<span id="cb20-64"><a href="#cb20-64" aria-hidden="true" tabindex="-1"></a> <span class="at">breaks =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="cn">NA</span>), </span>
<span id="cb20-65"><a href="#cb20-65" aria-hidden="true" tabindex="-1"></a> <span class="at">labels =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="st">"none"</span>)) <span class="sc">+</span></span>
<span id="cb20-66"><a href="#cb20-66" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_linetype_manual</span>(<span class="at">name =</span> <span class="st">"whether cutoff"</span>, <span class="at">values =</span> <span class="fu">c</span>(<span class="st">`</span><span class="at">TRUE</span><span class="st">`</span><span class="ot">=</span><span class="dv">1</span>, <span class="st">`</span><span class="at">FALSE</span><span class="st">`</span><span class="ot">=</span><span class="dv">3</span>)) <span class="sc">+</span></span>
<span id="cb20-67"><a href="#cb20-67" aria-hidden="true" tabindex="-1"></a> <span class="fu">guides</span>(<span class="at">linetype =</span> <span class="st">"none"</span>, <span class="at">size =</span> <span class="st">"none"</span>) <span class="sc">+</span></span>
<span id="cb20-68"><a href="#cb20-68" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(<span class="at">x =</span> <span class="st">"surprisal (nats)"</span>, <span class="at">y =</span> ylab)</span>
<span id="cb20-69"><a href="#cb20-69" aria-hidden="true" tabindex="-1"></a>}</span>
<span id="cb20-70"><a href="#cb20-70" aria-hidden="true" tabindex="-1"></a>p_gpt3_cutoffs_meaneffect <span class="ot"><-</span> <span class="fu">compare_one_model_multi_cutoffs_surprisal</span>(data_to_plot_multicutoffs) <span class="sc">+</span></span>
<span id="cb20-71"><a href="#cb20-71" aria-hidden="true" tabindex="-1"></a> <span class="fu">facet_grid</span>( <span class="sc">~</span> model, <span class="at">labeller =</span> my_labeller, <span class="at">scales =</span> <span class="st">"free_y"</span>) <span class="sc">+</span></span>
<span id="cb20-72"><a href="#cb20-72" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(</span>
<span id="cb20-73"><a href="#cb20-73" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.position =</span> <span class="fu">c</span>(.<span class="dv">24</span>,.<span class="dv">68</span>),</span>
<span id="cb20-74"><a href="#cb20-74" aria-hidden="true" tabindex="-1"></a> <span class="at">legend.background =</span> <span class="fu">element_rect</span>(<span class="at">size =</span> <span class="dv">0</span>, <span class="at">fill =</span> <span class="fu">alpha</span>(<span class="st">"white"</span>, <span class="fl">0.5</span>), <span class="at">color =</span> <span class="fu">alpha</span>(<span class="st">"white"</span>, <span class="fl">0.5</span>))</span>
<span id="cb20-75"><a href="#cb20-75" aria-hidden="true" tabindex="-1"></a> ) <span class="sc">+</span></span>
<span id="cb20-76"><a href="#cb20-76" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(</span>
<span id="cb20-77"><a href="#cb20-77" aria-hidden="true" tabindex="-1"></a> <span class="at">y =</span> <span class="st">"effect on mean RT ±2*SE"</span>,</span>
<span id="cb20-78"><a href="#cb20-78" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle=</span><span class="st">"Effect of surprisal on RT"</span>, </span>
<span id="cb20-79"><a href="#cb20-79" aria-hidden="true" tabindex="-1"></a> <span class="co"># title="GAMs refit without highest surprisal items"</span></span>
<span id="cb20-80"><a href="#cb20-80" aria-hidden="true" tabindex="-1"></a> )</span>
<span id="cb20-81"><a href="#cb20-81" aria-hidden="true" tabindex="-1"></a><span class="co"># ggsave(p_gpt3_cutoffs_meaneffect,</span></span>
<span id="cb20-82"><a href="#cb20-82" aria-hidden="true" tabindex="-1"></a><span class="co"># filename = paste0(figsdir, "gpt3d_surprisal_cutoffs_effect_on_mean", ".pdf"),</span></span>
<span id="cb20-83"><a href="#cb20-83" aria-hidden="true" tabindex="-1"></a><span class="co"># width = 3, height = 3.5)</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
</section>
<section id="superlinearity-vs-perplexity" class="level3">
<h3 class="anchored" data-anchor-id="superlinearity-vs-perplexity">Superlinearity vs perplexity</h3>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb21"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb21-1"><a href="#cb21-1" aria-hidden="true" tabindex="-1"></a>d <span class="ot"><-</span> <span class="fu">full_join</span>(halflinear_diffs2, surprisal_means, <span class="at">by =</span> <span class="fu">c</span>(<span class="st">"model"</span>, <span class="st">"context_len"</span>)) <span class="sc">%>%</span> </span>
<span id="cb21-2"><a href="#cb21-2" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> context_lens, est_type <span class="sc">==</span> <span class="st">"mean"</span>) <span class="sc">%>%</span> </span>
<span id="cb21-3"><a href="#cb21-3" aria-hidden="true" tabindex="-1"></a> <span class="fu">rename</span>(<span class="at">diff =</span> diff_slope_hi_v_low, <span class="at">sem =</span> sum_std.error)</span>
<span id="cb21-4"><a href="#cb21-4" aria-hidden="true" tabindex="-1"></a>d <span class="sc">%>%</span> </span>
<span id="cb21-5"><a href="#cb21-5" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(model <span class="sc">%>%</span> <span class="fu">str_starts</span>(<span class="st">"GPT"</span>)) <span class="sc">%>%</span> </span>
<span id="cb21-6"><a href="#cb21-6" aria-hidden="true" tabindex="-1"></a> <span class="co"># note: `weight` aesthetic will be passed on to lm's `weights`` in geom_smooth/geom_line</span></span>
<span id="cb21-7"><a href="#cb21-7" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> <span class="sc">-</span>mean_surprisal, <span class="at">y =</span> diff, <span class="at">color =</span> context_len,</span>
<span id="cb21-8"><a href="#cb21-8" aria-hidden="true" tabindex="-1"></a> <span class="at">ymax =</span> upper, <span class="at">ymin =</span> lower, <span class="at">shape =</span> context_len,</span>
<span id="cb21-9"><a href="#cb21-9" aria-hidden="true" tabindex="-1"></a> <span class="at">weight=</span> <span class="dv">1</span><span class="sc">/</span><span class="fu">sqrt</span>(sem))) <span class="sc">+</span></span>
<span id="cb21-10"><a href="#cb21-10" aria-hidden="true" tabindex="-1"></a> <span class="co"># facet_grid(est_type ~ ., labeller = my_labeller, scales = "free_y") +</span></span>
<span id="cb21-11"><a href="#cb21-11" aria-hidden="true" tabindex="-1"></a> <span class="co"># ggpubr::stat_regline_equation(label.x.npc = .8, label.y.npc = .8, </span></span>
<span id="cb21-12"><a href="#cb21-12" aria-hidden="true" tabindex="-1"></a> <span class="co"># aes(label = after_stat(eq.label))) +</span></span>
<span id="cb21-13"><a href="#cb21-13" aria-hidden="true" tabindex="-1"></a> ggpubr<span class="sc">::</span><span class="fu">stat_regline_equation</span>(</span>
<span id="cb21-14"><a href="#cb21-14" aria-hidden="true" tabindex="-1"></a> <span class="at">label.x.npc =</span> .<span class="dv">6</span>, <span class="at">label.y.npc =</span> .<span class="dv">95</span>, </span>
<span id="cb21-15"><a href="#cb21-15" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">color=</span><span class="cn">NULL</span>, <span class="at">shape =</span><span class="cn">NULL</span>, <span class="at">label =</span> <span class="fu">after_stat</span>(rr.label)), </span>
<span id="cb21-16"><a href="#cb21-16" aria-hidden="true" tabindex="-1"></a> <span class="at">color=</span><span class="st">"grey"</span>, <span class="at">size=</span><span class="dv">4</span>, <span class="at">show.legend =</span> <span class="cn">FALSE</span>) <span class="sc">+</span></span>
<span id="cb21-17"><a href="#cb21-17" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_smooth</span>(</span>
<span id="cb21-18"><a href="#cb21-18" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">color=</span><span class="cn">NULL</span>,<span class="at">shape =</span><span class="cn">NULL</span>), </span>
<span id="cb21-19"><a href="#cb21-19" aria-hidden="true" tabindex="-1"></a> <span class="at">method =</span> <span class="st">"lm"</span>, <span class="at">formula =</span> <span class="st">'y~x'</span>, <span class="at">size =</span> <span class="dv">0</span>, <span class="at">alpha =</span> .<span class="dv">1</span>, <span class="at">color=</span><span class="st">"#f1f1f1"</span>) <span class="sc">+</span> <span class="co"># SE ribbon, no line</span></span>
<span id="cb21-20"><a href="#cb21-20" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_line</span>(</span>
<span id="cb21-21"><a href="#cb21-21" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">color=</span><span class="cn">NULL</span>, <span class="at">shape =</span><span class="cn">NULL</span>), <span class="at">stat =</span> <span class="st">"smooth"</span>, </span>
<span id="cb21-22"><a href="#cb21-22" aria-hidden="true" tabindex="-1"></a> <span class="at">method =</span> <span class="st">"lm"</span>, <span class="at">formula =</span> <span class="st">'y~x'</span>, <span class="at">alpha =</span> .<span class="dv">66</span>, <span class="at">lty=</span><span class="st">"dotted"</span>, <span class="at">color=</span><span class="st">"grey"</span>) <span class="sc">+</span> <span class="co"># just line</span></span>
<span id="cb21-23"><a href="#cb21-23" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_errorbar</span>(<span class="at">data =</span> d, <span class="at">width =</span> .<span class="dv">03</span>) <span class="sc">+</span> </span>
<span id="cb21-24"><a href="#cb21-24" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_point</span>(<span class="at">data =</span> d, <span class="fu">aes</span>(<span class="at">fill =</span> <span class="fu">str_starts</span>(model,<span class="st">"GPT"</span>)), <span class="at">size=</span><span class="dv">3</span>, <span class="at">alpha =</span> .<span class="dv">6</span>) <span class="sc">+</span></span>
<span id="cb21-25"><a href="#cb21-25" aria-hidden="true" tabindex="-1"></a> ggrepel<span class="sc">::</span><span class="fu">geom_text_repel</span>(<span class="at">data =</span> d,</span>
<span id="cb21-26"><a href="#cb21-26" aria-hidden="true" tabindex="-1"></a> <span class="fu">aes</span>(<span class="at">label =</span> model_labs[model]),</span>
<span id="cb21-27"><a href="#cb21-27" aria-hidden="true" tabindex="-1"></a> <span class="at">max.overlaps =</span> <span class="cn">Inf</span>, <span class="at">min.segment.length =</span> <span class="fl">0.2</span>, <span class="at">size =</span> <span class="dv">3</span>, <span class="at">segment.alpha =</span> .<span class="dv">2</span>,</span>
<span id="cb21-28"><a href="#cb21-28" aria-hidden="true" tabindex="-1"></a> <span class="at">force_pull =</span> .<span class="dv">5</span>, <span class="at">hjust =</span> .<span class="dv">9</span>, <span class="at">box.padding =</span> .<span class="dv">5</span>, <span class="at">color =</span> <span class="st">"black"</span>, <span class="at">alpha =</span> <span class="fl">0.4</span>) <span class="sc">+</span></span>
<span id="cb21-29"><a href="#cb21-29" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(<span class="at">legend.position=</span><span class="st">"top"</span>) <span class="sc">+</span></span>
<span id="cb21-30"><a href="#cb21-30" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb21-31"><a href="#cb21-31" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_fill_manual</span>(<span class="at">name =</span> <span class="st">"GPT"</span>, <span class="at">values =</span> <span class="fu">c</span>(<span class="st">`</span><span class="at">TRUE</span><span class="st">`</span><span class="ot">=</span><span class="st">"grey"</span>, <span class="st">`</span><span class="at">FALSE</span><span class="st">`</span><span class="ot">=</span><span class="st">"white"</span>)) <span class="sc">+</span></span>
<span id="cb21-32"><a href="#cb21-32" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_shape_manual</span>(</span>
<span id="cb21-33"><a href="#cb21-33" aria-hidden="true" tabindex="-1"></a> <span class="at">values=</span><span class="cf">if</span> (twocontexts) <span class="fu">c</span>(<span class="dv">21</span>, <span class="dv">23</span>) <span class="cf">else</span> <span class="fu">c</span>(<span class="dv">21</span>,<span class="dv">22</span>,<span class="dv">23</span>), </span>
<span id="cb21-34"><a href="#cb21-34" aria-hidden="true" tabindex="-1"></a> <span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb21-35"><a href="#cb21-35" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(</span>
<span id="cb21-36"><a href="#cb21-36" aria-hidden="true" tabindex="-1"></a> <span class="at">x =</span> <span class="st">"LM quality (negative log perplexity)"</span>,</span>
<span id="cb21-37"><a href="#cb21-37" aria-hidden="true" tabindex="-1"></a> <span class="at">y =</span> <span class="st">"superlinearity"</span>,</span>
<span id="cb21-38"><a href="#cb21-38" aria-hidden="true" tabindex="-1"></a> <span class="at">title =</span> <span class="st">"Superlinearity vs. LM quality"</span>) <span class="sc">+</span></span>
<span id="cb21-39"><a href="#cb21-39" aria-hidden="true" tabindex="-1"></a> <span class="fu">guides</span>(<span class="at">fill =</span> <span class="st">"none"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
<p><img src="make_figures_files/figure-html/unnamed-chunk-10-1.png" class="img-fluid" width="672"></p>
</div>
</div>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb22"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb22-1"><a href="#cb22-1" aria-hidden="true" tabindex="-1"></a><span class="do">### FIG FOR PAPER</span></span>
<span id="cb22-2"><a href="#cb22-2" aria-hidden="true" tabindex="-1"></a><span class="fu">ggsave</span>(</span>
<span id="cb22-3"><a href="#cb22-3" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(</span>
<span id="cb22-4"><a href="#cb22-4" aria-hidden="true" tabindex="-1"></a> figsdir, context_pref,</span>
<span id="cb22-5"><a href="#cb22-5" aria-hidden="true" tabindex="-1"></a> <span class="st">"gaulss_halflinear_diffs2_justFitGPTs_mean_v_mean_surprisal_lengthstogether.pdf"</span>),</span>
<span id="cb22-6"><a href="#cb22-6" aria-hidden="true" tabindex="-1"></a> <span class="at">width =</span> <span class="dv">7</span>, <span class="at">height =</span> <span class="fl">4.25</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
<section id="cutoffs-superlinearity" class="level4">
<h4 class="anchored" data-anchor-id="cutoffs-superlinearity">Cutoffs superlinearity</h4>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb23"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb23-1"><a href="#cb23-1" aria-hidden="true" tabindex="-1"></a>halflinear_diffs2_less6 <span class="ot"><-</span> <span class="fu">make_halflinears_diffs_dataset</span>(half_linears2_less6)</span>
<span id="cb23-2"><a href="#cb23-2" aria-hidden="true" tabindex="-1"></a>halflinear_diffs2_less12 <span class="ot"><-</span> <span class="fu">make_halflinears_diffs_dataset</span>(half_linears2_less12)</span>
<span id="cb23-3"><a href="#cb23-3" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb23-4"><a href="#cb23-4" aria-hidden="true" tabindex="-1"></a>p_gpt3d_cutoffs_superlinearity <span class="ot"><-</span> <span class="fu">bind_rows</span>(</span>
<span id="cb23-5"><a href="#cb23-5" aria-hidden="true" tabindex="-1"></a> halflinear_diffs2 <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">cutoff =</span> <span class="cn">NA</span>) <span class="sc">%>%</span> </span>
<span id="cb23-6"><a href="#cb23-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(model <span class="sc">==</span> <span class="st">"GPT3-davinci"</span>, context_len <span class="sc">==</span> <span class="st">"max"</span>),</span>
<span id="cb23-7"><a href="#cb23-7" aria-hidden="true" tabindex="-1"></a> halflinear_diffs2_less6 <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">cutoff =</span> <span class="dv">6</span>),</span>
<span id="cb23-8"><a href="#cb23-8" aria-hidden="true" tabindex="-1"></a> halflinear_diffs2_less12 <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">cutoff =</span> <span class="dv">12</span>)</span>
<span id="cb23-9"><a href="#cb23-9" aria-hidden="true" tabindex="-1"></a> ) <span class="sc">%>%</span> </span>
<span id="cb23-10"><a href="#cb23-10" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(est_type <span class="sc">==</span> <span class="st">"mean"</span>) <span class="sc">%>%</span> </span>
<span id="cb23-11"><a href="#cb23-11" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">cutoff =</span> <span class="fu">factor</span>(cutoff)) <span class="sc">%>%</span> </span>
<span id="cb23-12"><a href="#cb23-12" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> context_lens) <span class="sc">%>%</span> </span>
<span id="cb23-13"><a href="#cb23-13" aria-hidden="true" tabindex="-1"></a> <span class="fu">rename</span>(<span class="at">diff =</span> diff_slope_hi_v_low, <span class="at">sem =</span> sum_std.error) <span class="sc">%>%</span></span>
<span id="cb23-14"><a href="#cb23-14" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> cutoff, <span class="at">y =</span> diff, <span class="at">color =</span> cutoff, </span>
<span id="cb23-15"><a href="#cb23-15" aria-hidden="true" tabindex="-1"></a> <span class="at">ymax =</span> upper, <span class="at">ymin =</span> lower)) <span class="sc">+</span></span>
<span id="cb23-16"><a href="#cb23-16" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_errorbar</span>(<span class="at">width =</span> .<span class="dv">03</span>) <span class="sc">+</span> <span class="fu">geom_point</span>(<span class="at">size=</span><span class="dv">3</span>, <span class="at">alpha =</span> .<span class="dv">6</span>) <span class="sc">+</span></span>
<span id="cb23-17"><a href="#cb23-17" aria-hidden="true" tabindex="-1"></a> <span class="fu">facet_grid</span>( <span class="sc">~</span> model, <span class="at">labeller =</span> my_labeller, <span class="at">scales =</span> <span class="st">"free_y"</span>) <span class="sc">+</span></span>
<span id="cb23-18"><a href="#cb23-18" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_manual</span>(<span class="at">name =</span> <span class="st">"cutoff"</span>, <span class="at">values=</span><span class="fu">rev</span>(scales<span class="sc">::</span><span class="fu">hue_pal</span>()(<span class="dv">14</span>)), </span>
<span id="cb23-19"><a href="#cb23-19" aria-hidden="true" tabindex="-1"></a> <span class="at">breaks =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="cn">NA</span>), </span>
<span id="cb23-20"><a href="#cb23-20" aria-hidden="true" tabindex="-1"></a> <span class="at">labels =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="st">"none"</span>)) <span class="sc">+</span></span>
<span id="cb23-21"><a href="#cb23-21" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_x_discrete</span>(<span class="at">name =</span> <span class="st">"cutoff"</span>, </span>
<span id="cb23-22"><a href="#cb23-22" aria-hidden="true" tabindex="-1"></a> <span class="at">breaks =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="cn">NA</span>), </span>
<span id="cb23-23"><a href="#cb23-23" aria-hidden="true" tabindex="-1"></a> <span class="at">labels =</span> <span class="fu">c</span>(<span class="dv">5</span><span class="sc">:</span><span class="dv">18</span>,<span class="st">"none"</span>)) <span class="sc">+</span></span>
<span id="cb23-24"><a href="#cb23-24" aria-hidden="true" tabindex="-1"></a> <span class="fu">expand_limits</span>(<span class="at">y=</span><span class="fu">c</span>(<span class="dv">0</span>, <span class="cn">NA</span>)) <span class="sc">+</span></span>
<span id="cb23-25"><a href="#cb23-25" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(<span class="at">legend.position =</span> <span class="st">"none"</span>) <span class="sc">+</span> </span>
<span id="cb23-26"><a href="#cb23-26" aria-hidden="true" tabindex="-1"></a> <span class="fu">labs</span>(</span>
<span id="cb23-27"><a href="#cb23-27" aria-hidden="true" tabindex="-1"></a> <span class="co"># x = "Cutoff",</span></span>
<span id="cb23-28"><a href="#cb23-28" aria-hidden="true" tabindex="-1"></a> <span class="at">y =</span> <span class="st">"superlinearity</span><span class="sc">\n</span><span class="st">of effect on mean RT"</span>,</span>
<span id="cb23-29"><a href="#cb23-29" aria-hidden="true" tabindex="-1"></a> <span class="at">subtitle =</span> <span class="st">"Superlinearity"</span></span>
<span id="cb23-30"><a href="#cb23-30" aria-hidden="true" tabindex="-1"></a> <span class="co"># title = "GAMs refit without highest surprisal items"</span></span>
<span id="cb23-31"><a href="#cb23-31" aria-hidden="true" tabindex="-1"></a> )</span>
<span id="cb23-32"><a href="#cb23-32" aria-hidden="true" tabindex="-1"></a><span class="co"># </span></span>
<span id="cb23-33"><a href="#cb23-33" aria-hidden="true" tabindex="-1"></a><span class="co"># ggsave(p_gpt3d_cutoffs_superlinearity,</span></span>
<span id="cb23-34"><a href="#cb23-34" aria-hidden="true" tabindex="-1"></a><span class="co"># filename = paste0(figsdir, "gpt3d_surprisal_cutoffs", ".pdf"),</span></span>
<span id="cb23-35"><a href="#cb23-35" aria-hidden="true" tabindex="-1"></a><span class="co"># width = 3, height = 3.5)</span></span>
<span id="cb23-36"><a href="#cb23-36" aria-hidden="true" tabindex="-1"></a><span class="fu">wrap_plots</span>(</span>
<span id="cb23-37"><a href="#cb23-37" aria-hidden="true" tabindex="-1"></a> p_gpt3_cutoffs_meaneffect, </span>
<span id="cb23-38"><a href="#cb23-38" aria-hidden="true" tabindex="-1"></a> p_gpt3d_cutoffs_superlinearity, <span class="at">guides =</span> <span class="st">"collect"</span>, <span class="at">widths =</span> <span class="fu">c</span>(<span class="fl">1.2</span>,<span class="dv">1</span>)) <span class="sc">+</span> </span>
<span id="cb23-39"><a href="#cb23-39" aria-hidden="true" tabindex="-1"></a> <span class="fu">plot_annotation</span>(</span>
<span id="cb23-40"><a href="#cb23-40" aria-hidden="true" tabindex="-1"></a> <span class="at">title=</span><span class="st">"GAMs refit without highest surprisal items"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
<p><img src="make_figures_files/figure-html/unnamed-chunk-12-1.png" class="img-fluid" width="672"></p>
</div>
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb24"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb24-1"><a href="#cb24-1" aria-hidden="true" tabindex="-1"></a><span class="do">### FIG FOR PAPER</span></span>
<span id="cb24-2"><a href="#cb24-2" aria-hidden="true" tabindex="-1"></a><span class="fu">ggsave</span>(</span>
<span id="cb24-3"><a href="#cb24-3" aria-hidden="true" tabindex="-1"></a> <span class="at">filename =</span> <span class="fu">paste0</span>(figsdir, <span class="st">"gpt3d_surprisal_cutoffs"</span>, <span class="st">".pdf"</span>),</span>
<span id="cb24-4"><a href="#cb24-4" aria-hidden="true" tabindex="-1"></a> <span class="at">width =</span> <span class="dv">6</span>, <span class="at">height =</span> <span class="fl">3.5</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
</div>
</section>
</section>
</section>
<section id="linear-model-coefficients" class="level2">
<h2 class="anchored" data-anchor-id="linear-model-coefficients">Linear model coefficients</h2>
<div class="cell">
<details>
<summary>Code</summary>
<div class="sourceCode cell-code" id="cb25"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb25-1"><a href="#cb25-1" aria-hidden="true" tabindex="-1"></a>summaries_linear <span class="ot"><-</span> readr<span class="sc">::</span><span class="fu">read_rds</span>(</span>
<span id="cb25-2"><a href="#cb25-2" aria-hidden="true" tabindex="-1"></a> <span class="fu">paste0</span>(datadir, <span class="st">"model-summaries-NEW-linear-wprevm.rds"</span>))</span>
<span id="cb25-3"><a href="#cb25-3" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb25-4"><a href="#cb25-4" aria-hidden="true" tabindex="-1"></a>linear_coefs<span class="ot"><-</span>purrr<span class="sc">::</span><span class="fu">map_df</span>(</span>
<span id="cb25-5"><a href="#cb25-5" aria-hidden="true" tabindex="-1"></a> summaries_linear, </span>
<span id="cb25-6"><a href="#cb25-6" aria-hidden="true" tabindex="-1"></a> \(s) {s<span class="sc">$</span>p.table <span class="sc">%>%</span> <span class="fu">as_tibble</span>() <span class="sc">%>%</span> <span class="fu">mutate</span>(<span class="at">term=</span><span class="fu">names</span>(s<span class="sc">$</span>p.pv))},</span>
<span id="cb25-7"><a href="#cb25-7" aria-hidden="true" tabindex="-1"></a> <span class="at">.id =</span> <span class="st">"model"</span>)</span>
<span id="cb25-8"><a href="#cb25-8" aria-hidden="true" tabindex="-1"></a>linear_coefs <span class="sc">%>%</span></span>
<span id="cb25-9"><a href="#cb25-9" aria-hidden="true" tabindex="-1"></a> <span class="fu">separate_modelnames</span>() <span class="sc">%>%</span></span>
<span id="cb25-10"><a href="#cb25-10" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> context_lens) <span class="sc">%>%</span> </span>
<span id="cb25-11"><a href="#cb25-11" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x=</span>model,<span class="at">y=</span>Estimate,<span class="co">#y=`Pr(>|z|)`,</span></span>
<span id="cb25-12"><a href="#cb25-12" aria-hidden="true" tabindex="-1"></a> <span class="at">color=</span>context_len)) <span class="sc">+</span></span>
<span id="cb25-13"><a href="#cb25-13" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_point</span>() <span class="sc">+</span> <span class="fu">facet_wrap</span>(<span class="sc">~</span>term, <span class="at">scales =</span> <span class="st">"free"</span>, <span class="at">labeller=</span>my_labeller) <span class="sc">+</span></span>
<span id="cb25-14"><a href="#cb25-14" aria-hidden="true" tabindex="-1"></a> <span class="fu">theme</span>(<span class="at">axis.text.x =</span> <span class="fu">element_text</span>(<span class="at">angle =</span> <span class="dv">30</span>, <span class="at">hjust =</span> <span class="dv">1</span>)) <span class="sc">+</span></span>
<span id="cb25-15"><a href="#cb25-15" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) </span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</details>
<div class="cell-output-display">
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<summary>Code</summary>
<div class="sourceCode cell-code" id="cb26"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb26-1"><a href="#cb26-1" aria-hidden="true" tabindex="-1"></a><span class="co"># Whether to include both mean and variance</span></span>
<span id="cb26-2"><a href="#cb26-2" aria-hidden="true" tabindex="-1"></a>which_terms <span class="ot"><-</span> <span class="st">"both"</span> <span class="co"># specify either "surprisal", "surprisal.1", or "both"</span></span>
<span id="cb26-3"><a href="#cb26-3" aria-hidden="true" tabindex="-1"></a>terms_included <span class="ot"><-</span> <span class="cf">if</span> (which_terms<span class="sc">==</span><span class="st">"both"</span>) <span class="fu">c</span>(<span class="st">"surprisal"</span>, <span class="st">"surprisal.1"</span>) <span class="cf">else</span> which_terms</span>
<span id="cb26-4"><a href="#cb26-4" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb26-5"><a href="#cb26-5" aria-hidden="true" tabindex="-1"></a>linear_coefs <span class="sc">%>%</span> </span>
<span id="cb26-6"><a href="#cb26-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">separate_modelnames</span>() <span class="sc">%>%</span></span>
<span id="cb26-7"><a href="#cb26-7" aria-hidden="true" tabindex="-1"></a> <span class="fu">mutate</span>(<span class="at">model =</span> dplyr<span class="sc">::</span><span class="fu">recode</span>(model, <span class="sc">!!!</span>model_labs)) <span class="sc">%>%</span> </span>
<span id="cb26-8"><a href="#cb26-8" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(context_len <span class="sc">%in%</span> context_lens) <span class="sc">%>%</span> </span>
<span id="cb26-9"><a href="#cb26-9" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(term <span class="sc">%in%</span> terms_included) <span class="sc">%>%</span> </span>
<span id="cb26-10"><a href="#cb26-10" aria-hidden="true" tabindex="-1"></a> <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x=</span>model,<span class="at">y=</span>Estimate,</span>
<span id="cb26-11"><a href="#cb26-11" aria-hidden="true" tabindex="-1"></a> <span class="at">ymin=</span>Estimate<span class="fl">-1.96</span><span class="sc">*</span><span class="st">`</span><span class="at">Std. Error</span><span class="st">`</span>,</span>
<span id="cb26-12"><a href="#cb26-12" aria-hidden="true" tabindex="-1"></a> <span class="at">ymax=</span>Estimate<span class="fl">+1.96</span><span class="sc">*</span><span class="st">`</span><span class="at">Std. Error</span><span class="st">`</span>,</span>
<span id="cb26-13"><a href="#cb26-13" aria-hidden="true" tabindex="-1"></a> <span class="at">color=</span>context_len)) <span class="sc">+</span></span>
<span id="cb26-14"><a href="#cb26-14" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_point</span>(<span class="fu">aes</span>(<span class="at">shape=</span>context_len)) <span class="sc">+</span> </span>
<span id="cb26-15"><a href="#cb26-15" aria-hidden="true" tabindex="-1"></a> <span class="fu">geom_errorbar</span>(<span class="at">width =</span> .<span class="dv">25</span>, <span class="at">alpha=</span><span class="fl">0.75</span>) <span class="sc">+</span> </span>
<span id="cb26-16"><a href="#cb26-16" aria-hidden="true" tabindex="-1"></a> <span class="fu">facet_grid</span>(term<span class="sc">~</span>., <span class="at">scales =</span> <span class="st">"free"</span>, <span class="at">labeller=</span>my_labeller) <span class="sc">+</span></span>
<span id="cb26-17"><a href="#cb26-17" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_color_discrete</span>(<span class="at">name =</span> <span class="st">"context amount"</span>, <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>
<span id="cb26-18"><a href="#cb26-18" aria-hidden="true" tabindex="-1"></a> <span class="fu">scale_shape_manual</span>(</span>
<span id="cb26-19"><a href="#cb26-19" aria-hidden="true" tabindex="-1"></a> <span class="at">values=</span><span class="cf">if</span> (twocontexts) <span class="fu">c</span>(<span class="dv">1</span>, <span class="dv">5</span>) <span class="cf">else</span> <span class="fu">c</span>(<span class="dv">1</span>,<span class="dv">0</span>,<span class="dv">5</span>), <span class="at">name =</span> <span class="st">"context amount"</span>, </span>
<span id="cb26-20"><a href="#cb26-20" aria-hidden="true" tabindex="-1"></a> <span class="at">labels =</span> context_len_labs) <span class="sc">+</span></span>