From 0b3dcb8b5fe7aa3c40eb4218e60a740ec106ac9d Mon Sep 17 00:00:00 2001 From: Asier Fernandez-Pato <78979132+asierFernandezP@users.noreply.github.com> Date: Sat, 12 Oct 2024 13:35:41 +0200 Subject: [PATCH] Update viromes.md --- docs/functional-annotation/viromes.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/functional-annotation/viromes.md b/docs/functional-annotation/viromes.md index b43fb07..faed9aa 100644 --- a/docs/functional-annotation/viromes.md +++ b/docs/functional-annotation/viromes.md @@ -76,7 +76,7 @@ The CheckV output is described [here](https://bitbucket.org/berkeleylab/checkv/s 9 proviruses, 46 viruses. ??? done "2. How many low, medium, and high quality viruses do we detect? How many complete viruses? How many of them have direct terminal repeats?" - 15 viruses with low-quality, 16 with medium-quality and 9 with high-quality. + 11 viruses with low-quality, 20 with medium-quality and 9 with high-quality. 15 viruses are complete. From them, 10 have direct terminal repeats (DTRs). **Note:** Depending on the project's goals, it may be advisable to select only viruses predicted to be of at least medium quality. However, for this exercise, we will proceed with all available sequences.