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finalize PubMed feature by creating landing table #15

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meerapatelmd opened this issue Dec 2, 2020 · 1 comment

Owner

meerapatelmd commented Dec 2, 2020

So far a PM_RESULTS Table is created. This needs to be pivoteted across to get the earliest to latest date range:

Average of each boundary with a standard deviation
Names of publications and snippets to be able to determine that the search returned a drug

The text was updated successfully, but these errors were encountered:

Owner Author

meerapatelmd commented Dec 2, 2020

pm_results <-
fantasia::qOMOP(
        "select * 
        from patelm9.pm_results"
)

pm_results %>%
        group_by(search_term, search_type) %>%
        summarize(is_missing = all(is.na(snippet))) %>%
        filter(is_missing == TRUE) %>%
        ungroup() %>%
        group_by(search_term) %>%
        summarize(no_results = all((is_missing == TRUE))) %>%
        filter(no_results == TRUE)

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