From e08ec97069eff5c7fea5b0f9ae4bbe59a13c2dcc Mon Sep 17 00:00:00 2001 From: janko Date: Mon, 6 Aug 2018 13:52:10 +0200 Subject: [PATCH] Use proper .gml full name --- README.md | 2 +- src/io.jl | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 8d00f4b..fbfe799 100644 --- a/README.md +++ b/README.md @@ -36,7 +36,7 @@ julia> # data_path = "/my/example/data.jld2" julia> # netw_results = learn_network(data_path, otu_data_key="otu_data", otu_header_key="otu_header", meta_data_key="meta_data", meta_header_key="meta_header", sensitive=true, heterogeneous=false) ``` -Results can currently be saved in JLD/2, fast for large networks, or as traditional GraphML (".gml") or edgelist (".edgelist") formats: +Results can currently be saved in JLD/2, fast for large networks, or as traditional [Graph Modelling Language](https://en.wikipedia.org/wiki/Graph_Modelling_Language) (".gml") or edgelist (".edgelist") formats: ```julia julia> save_network("/my/example/network_output.jld2", netw_results) diff --git a/src/io.jl b/src/io.jl index bb332c3..6cc2598 100644 --- a/src/io.jl +++ b/src/io.jl @@ -81,7 +81,7 @@ end """ load_network(net_path::AbstractString) -> FWResult{Int} -Load network results from disk. Available formats are '.tsv', '.csv', '.gml', '.jld' and '.jld2'. For GraphML, only files with structure identical to save_network('network.gml') output can currently be loaded. +Load network results from disk. Available formats are '.tsv', '.csv', '.gml', '.jld' and '.jld2'. For GML, only files with structure identical to save_network('network.gml') output can currently be loaded. Run parameters ("Mode") are only available when loading from JLD/2. - `net_path` - path from which to load the network results """