scripts in support of the publication
"The Variety of Transposition Behaviors Revealed by the High-Resolution Description of the Pseudomonas aeruginosa Saltovirus Integration Sites" currently submitted to journal "Viruses"
by Gilles Vergnaud 1 *, Cédric Midoux 1, Yann Blouin 1, Maria Bourkaltseva 2, Victor Krylov 2 and Christine Pourcel 1
1 Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris‐Sud, Université Paris‐Saclay, 91198, Gif‐sur‐Yvette cedex, France;
2 I. I. Mechnikov Research Institute for Vaccines & Sera, Moscow, Russia;
* Correspondence: [email protected]; Tel.: +33-(0)1 69 15 62 08
The two scripts have been used for the article to create plots of the transposition insertion sites along the genomes of interest. Functions are defined in functions.py and figures production for the article in main.py. Importantly, the main.py is provided only as an example on the way to invoke the functions.py script and must be adapted to specific input file names. Please check the "example" folder for short instructions and sample input file.