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Releases: molpopgen/fwdpy11

Point release -- new manual!

10 Jul 18:47
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  • fwdpy11.DiploidPopulation.dump_tables_to_tskit now populates the provenance table. #542
  • Improve checking migration rates in fwdpy11.DemographyDebugger. #545
  • fwdpy11.DemographyDebugger now makes a deep copy of input. #546
  • The C++ back-ends for Gaussian stabilizing selection classes got streamlined
    without changing the user interface. #547
  • Manual got overhauled. #543
  • Snowdrift example reimplemented using attrs. #548

If not using conda nor PyPi to install, use fwdpy11-0.8.3.tar.gz instead of the auto-generated downloads!

Point release

06 Jul 00:49
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Fix #538 via #539.
Re-implement initialization of DemographyDebugger using attrs. #540

This is the source distribution containing submodules:

fwdpy11-0.8.2.tar.gz

Point release

01 Jul 17:58
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  • Fixes #535 via #536
  • Improves memory handling at end of simulation. #537
  • Add 3 deme Jouganous model. #534

It not installing from PyPi or conda, please use the attached .tar.gz rather than those provided by GitHub, which exclude the submodules.

Stable release

23 Jun 18:34
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This is the first stable release of 0.8.x. This includes all the changes in the two alpha releases plus some new memory improvements. See the change log in the manual for details.

If not installing from PyPi nor bioconda, please use this file for compiling from source, as it contains the submodules:

fwdpy11-0.8.0.tar.gz

Second alpha release of 0.8.0

16 Jun 18:06
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Contains #529 and #530.

Please use either the PyPi source release or this:

fwdpy11-0.8.0a1.tar.gz

First alpha release of 0.8.0!

11 Jun 19:02
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This release has load of changes--see the change log in the manual for details.

Most important thing is the implementation of an efficient replacement for edge table sorting during simulation.

This is the sdist for this release, which you should use instead of the GitHub auto-generated files:

fwdpy11-0.8.0a0.tar.gz

Tree sequence "recaptitation"

17 Apr 20:18
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This is mostly a maintenance release. The only new feature is that we allow preservation of the first generation to facilitate correct tree sequence "recapitation". See the manual for details.

Correlated effect sizes across demes

13 Apr 17:48
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This release adds a major feature, which is to allow mutation effect sizes to differ across demes. See the change log in the manual for details + links to the new manual pages describing this feature.

A few bugs were squashed, too, and several important changes to the C++ back end also happened.

Milestone 0.7.0 contains all the relevant issue/PR links.

Bug fix

01 Apr 16:15
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Fixes #437

Bug fixes

30 Mar 21:46
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Fixes the following issues:

Also makes an important back-end change to the C++ implementation of a Population. #427