.gitignore

### Project specific:

dipper/conf.yaml
raw
out
owltools*
conf.json
translationtable/someid.yaml

# dot files
dot/
*.dot
!tests/resources/*/dot/README

# Clinvar testing artifacts
tests/resources/clinvar/nt/*.nt
tests/resources/clinvar/input/*reject.xml

# swap files
*~

# auto generated svg files
docs/img/*.svg

# Tom's bad habit
junk/*

# cmap files
docs/*/*.cmapthumbs
docs/.cmapthumbs/
docs/*/Old
project.idx

### Linters, static type checkers ###

.pytype/*
pytype.cfg
Pipfile.lock

### Python ###
# Created by https://www.gitignore.io
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]

# C extensions
*.so

# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
downloads/
eggs/
lib/
lib64/
parts/
sdist/
var/
*.egg-info/
.installed.cfg
*.egg

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.cache
nosetests.xml
coverage.xml

# Translations
*.mo
*.pot

# Django stuff:
*.log

# Sphinx documentation
docs/_build/

# PyBuilder
target/


### PyCharm ###
# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm

*.iml

## Directory-based project format:
.idea/
# if you remove the above rule, at least ignore the following:

# User-specific stuff:
# .idea/workspace.xml
# .idea/tasks.xml
# .idea/dictionaries

# Sensitive or high-churn files:
# .idea/dataSources.ids
# .idea/dataSources.xml
# .idea/sqlDataSources.xml
# .idea/dynamic.xml
# .idea/uiDesigner.xml

# Gradle:
# .idea/gradle.xml
# .idea/libraries

# Mongo Explorer plugin:
# .idea/mongoSettings.xml

## File-based project format:
*.ipr
*.iws

## Plugin-specific files:

# IntelliJ
out/

# mpeltonen/sbt-idea plugin
.idea_modules/

# JIRA plugin
atlassian-ide-plugin.xml

# Crashlytics plugin (for Android Studio and IntelliJ)
com_crashlytics_export_strings.xml
crashlytics.properties
crashlytics-build.properties

.DS_Store
.Rproj.user