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md_pme.mdp
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continuation = yes
constraints = all-bonds
constraint-algorithm = lincs
integrator = md
dt = 0.002
nsteps = 500000
nstcomm = 1
;
; Output control.
;
nstxout = 250
nstvout = 0
nstenergy = 250
nstxtcout = 250
nstcalcenergy = 250
;
nstlist = 5
ns_type = grid
cutoff-scheme = Verlet
rlist = 1.4
rcoulomb = 1.4
rvdw = 1.4
coulombtype = cut-off
vdwtype = cut-off
pbc = xyz
;
; Berendsen temperature coupling is on
;
Tcoupl = v_rescale
tau_t = 0.10
tc_grps = system
ref_t = 90.13
; Isotropic pressure coupling is now on
Pcoupl = Berendsen
Pcoupltype = isotropic
tau_p = 0.5
compressibility = 4.5e-5
ref_p = 10.79
gen_vel = no