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launcher.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<script src="js/libs/jquery-1.9.0.min.js"></script>
<script src="js/libs/angular.min1-5.js"></script>
<script src="js/libs/ui-bootstrap-tpls-2.0.1.min.js"></script>
<script src="js/libs/firebase.js"></script>
<script src="js/libs/angularfire.min.js"></script>
<script src="js/libs/highstock.js"></script>
<script src="js/libs/highcharts-ng.min.js"></script>
<script src="js/libs/moment.min.js"></script>
<link rel="stylesheet" type="text/css" href="css/bootstrap.min.css"/>
<link rel="stylesheet" type="text/css" href="css/main.css"/>
<title>clinFHIR Launcher</title>
<style>/*https://css-tricks.com/snippets/css/css-box-shadow/*/
.myBox {
margin-top: 10px;
box-shadow: 0 0 8px black;
padding:12px;
-webkit-border-radius: 5px;
-moz-border-radius: 5px;
border-radius: 5px;
}
.clickableDEP {
color: rgb(79, 155, 214);
cursor: pointer;
}
.pass {
color:green;
}
.fail {
color:red;
}
</style>
<script>
angular.module("sampleApp",['ui.bootstrap','ngStorage','firebase','highcharts-ng']).config(function($locationProvider) {
// enable html5Mode for pushstate ('#'-less URLs)
$locationProvider.html5Mode(true);
$locationProvider.hashPrefix('!');
});
angular.module("sampleApp").constant("moment", moment);
</script>
<script>
var config = {
apiKey: "AIzaSyBNMohLbPiSKwpGwfARopdeW_6LLXujcUo",
authDomain: "clinfhir.firebaseapp.com",
databaseURL: "https://clinfhir.firebaseio.com",
storageBucket: ""
};
if (firebase) {
firebase.initializeApp(config);
}
</script>
<script src="js/appConfigSvc.js"></script>
<script src="js/launcherCtl.js"></script>
<script src="js/setServers.js"></script>
<script src="js/libs/ngStorage.min.js"></script>
<script src="js/modalDialogSvc.js"></script>
<script src="resourceBuilder/rbServices.js"></script>
<script src="js/logicalModelSvc.js"></script>
<script src="js/loginCtrl.js"></script>
<script src="js/filters.js"></script>
</head>
<body style="padding: 8px;padding-top: 80px">
<div ng-app="sampleApp" ng-controller="launcherCtrl" class="container-fluid" ng-cloak>
<nav class="navbar navbar-default navbar-fixed-top" role="navigation">
<div class="col-md-8 col-sm-8">
<a class="navbar-brand" href="#">clinFHIR Launcher</a>
</div>
<div class="col-md-2 col-sm-2">
<div class="navbar-text pull-right">
{{firebase.auth().currentUser.email}}
</div>
</div>
<div class="col-md-1 col-sm-1">
<div ng-hide="waiting">
<div class="nav navbar-form navbar-right" ng-hide="firebase.auth().currentUser">
<span style="font-size:1.8em; cursor: pointer">
<div ng-click="login()">
<i class="glyphicon glyphicon-log-in"></i>
</div>
</span>
</div>
<div class="nav navbar-form navbar-right" ng-show="firebase.auth().currentUser">
<span style="font-size:1.8em; cursor: pointer"
uib-popover="{{firebase.auth().currentUser.email}}"
popover-placement="left"
popover-trigger="'mouseenter'">
<div href="#" ng-click="logout()"> <i class="glyphicon glyphicon-log-out"></i></div>
</span>
</div>
</div>
</div>
<div class="col-md-1 col-sm-1">
<ul class="nav navbar-nav navbar-right" ng-hide="waiting">
<li uib-dropdown>
<a href="#" uib-dropdown-toggle>
<span style="font-size:2em; cursor: pointer">
<i class="glyphicon glyphicon-cog"></i>
</span>
</a>
<ul class="dropdown-menu" role="menu">
<li>
<a href="#" ng-click="showChart()" ng-hide="displayMode=='access'"
uib-popover="Show how many people are using clinFHIR"
popover-placement="left"
popover-trigger="'mouseenter'">Access statistics</a>
</li>
<li>
<a href="#" ng-click="displayMode = 'front'" ng-hide="displayMode=='front'"
uib-popover="Show the main Launcher screen"
popover-placement="left"
popover-trigger="'mouseenter'">Launcher</a>
</li>
</ul>
</li>
</ul>
</div>
</nav>
<div class="row" ng-show="displayMode == 'front'">
<div class="col-md-8 col-sm-8">
<div class="myBox">
<uib-tabset>
<uib-tab>
<uib-tab-heading><strong>Main modules (open in new tab)</strong></uib-tab-heading>
<br/>
<table class="table width='100%'">
<tr>
<td>
<a target="_blank" href="patientViewer.html">Patient Viewer</a>
</td>
<td>
<p>Display resources for a specific patient, using a number of different views
such as a list by resource type, json & tree views, encounters by condition,
numeric Observation charting and graphical relationship views.</p>
<p>There is also the option to add a new patient, and to create sample data for that patient.</p>
</td>
<td>Patient resources are stored on the Data Server.
The server should support the Patient/$everything operation.</td>
</tr>
<tr>
<td>
<a target="_blank" href="query.html">Server Query</a>
</td>
<td>
Supports ad hoc queries against any FHIR server. Includes a simple query builder.
The response can be displayed as Json or a Tree view, and FHIRPath is supported.
</td>
<td>
Can access any compliant FHIR server (must expose a Capability Statement)
</td>
</tr>
<tr>
<td><a target="_blank" href="builder.html">Scenario Builder</a></td>
<td>
<p>The Scenario Builder is used to join together the resources needed to represent a specific clinical scenario.
It can use Core Resource types, Profiles and Logical models as it does this. The intention is to help people understand
how resources can tell a clinical story, and to validate that the resource types available (including profiles) are
sufficient.</p>
<p>Note that the builder still has issues with more complex resource types - this is a work in progress</p>
</td>
<td>
Patient information is on the Data Server. Profiles on the Conformance server.
ValueSets on the Terminology server.
<br/>
<div><a class="pull-right" target="_blank" href="https://fhirblog.com/creating-a-simple-scenario/">Create a simple scenario</a></div>
<div><a class="pull-right" target="_blank" href="https://fhirblog.com/adding-structured-data-to-a-scenario/">Adding structured data to a scenario</a></div>
<div><a class="pull-right" target="_blank" href="https://fhirblog.com/creating-a-fhir-document/">Create a Document</a></div>
</td>
</tr>
<tr>
<td width="15%">
<a target="_blank" href="logicalModeller.html">Logical Modeller</a>
</td>
<td>
The Logical modeller allows the creation of a model that represents a particular interoperability requirement
in a format that is easy to use. It uses FHIR datatypes, and can be based on an existing resource type or completely
'ad hoc'. It is intended to act as a 'bridge' between Modeller and User, and can act as the basis for the generation
of the profiling components required by FHIR
</td>
<td>
Models are saved on the Conformance Server. Can reference ValueSets from the Terminology server.
<br/> <br/>
<div><a class="pull-right" target="_blank" href="https://fhirblog.com/creating-an-information-model/">Create an Information Model</a></div>
<div><a class="pull-right" target="_blank" href="https://fhirblog.com/creating-a-resources-model/">Create a Resources Model</a></div>
</td>
</tr>
<tr>
<td>
<a target="_blank" href="profileDiff.html">Implementation Guide Browser</a>
</td>
<td>
Display the contents of an Implementation Guide, and the relationships between the
contents of the Guide.
</td>
<td>
The Implementation guide, profiles and Extension Definitions are on the Conformance Server,
the terminology resources (eg ValueSet) are on the Terminology Server
</td>
</tr>
<tr>
<td>
<a target="_blank" href="EDBuilder.html">Extension Definition builder</a>
</td>
<td>
Views and builds extension definitions. These can be defined and applied to the Logical Model, which will
allow them to be included in the generated Profile
</td>
<td>
Extension definitions are saved on the Conformance Server
</td>
</tr>
<tr>
<td width="15%">
<a target="_blank" href="codeSystem.html">CodeSystem builder</a>
</td>
<td>
The CodeSystem defines a set of Concepts from which a ValueSet provides possible values for a resource element. The actual 'binding' between
CodeSystem and element is done by the ValueSet. This component allows you to build (and edit) a
CodeSystem, and optionally builds the ValueSet as well.
</td>
<td>
CodeSystems are saved on the Terminology Server.
</td>
</tr>
<tr>
<td>
<a target="_blank" href="valuesetCreator.html">ValueSet explorer</a>
</td>
<td>
Lets you view existing ValueSets. The builder works best with SNOMED (at the moment).
</td>
<td>ValueSets are stored on the Terminology Server</td>
</tr>
</table>
</uib-tab>
<uib-tab>
<uib-tab-heading><strong>Experimental modules (open in new tab)</strong></uib-tab-heading>
<br/>
<table class="table width='100%'">
<tr>
<td>
<a target="_blank" href="newBuilder.html">New Builder</a>
</td>
<td>
A new app for building a resource instance from a profile. Intended to support
extensions and profiling characteristics like slicing & fixed values. Incomplete
at the moment - in particular will only work with 2 level resource types - CarePlan
resources will not be complete.
</td>
<td>
</td>
</tr>
<tr>
<td>
<a target="_blank" href="conceptMap.html">Concept Mapper</a>
</td>
<td>
Edit concept maps.
</td>
<td>
R3 conformance server only
</td>
</tr>
</table>
</uib-tab>
</uib-tabset>
</div>
</div>
<div class="col-md-4 col-sm-4">
<div class="myBox">
<div class="pull-right" ng-click="showServers = !showServers">
<span class="clickable" ng-show="showServers">Cancel</span>
<span class="clickable" ng-hide="showServers">Edit</span>
</div>
<h5>Current servers </h5>
<div ng-controller="setServersCtrl">
<table class="table width='100%'">
<tr><td><strong>Data Server</strong></td><td>
<div ng-hide = "showServers">{{input.dataServer.name}}</div>
<div ng-show="showServers">
<select ng-model="input.dataServer" class="form-control"
ng-options="item.name for item in allServers"
ng-change="serverDirty = true">
</select>
</div>
</td>
<td>
<span ng-hide="showServers">
<i class="glyphicon glyphicon-question-sign clickable"
ng-click="testServer('Data')"
uib-popover="The data server holds most resources apart from the Conformance ones. Click to test."
popover-placement="left"
popover-trigger="'mouseenter'"> </i>
<i ng-show="testing.testData.ok" class="glyphicon glyphicon-ok pass"></i>
<i ng-show="testing.testData.fail" class="glyphicon glyphicon-remove fail"></i>
</span>
</td>
</tr>
<tr><td><strong>Conformance Server</strong></td>
<td>
<div ng-hide = "showServers">{{input.confServer.name}}</div>
<div ng-show="showServers">
<select ng-model="input.confServer" class="form-control"
ng-options="item.name for item in allServers"
ng-change="serverDirty = true">
</select>
</div>
</td>
<td>
<span ng-hide="showServers">
<i class="glyphicon glyphicon-question-sign clickable"
ng-click="testServer('Conformance')"
uib-popover="The data conformance server holds Profiles, Extension Definitions and other conformance resources. Click to test."
popover-placement="left"
popover-trigger="'mouseenter'"></i>
<i ng-show="testing.testConformance.ok" class="glyphicon glyphicon-ok pass"></i>
<i ng-show="testing.testConformance.fail" class="glyphicon glyphicon-remove fail"></i>
</span>
</td>
</tr>
<tr><td><strong>Terminology Server</strong></td>
<td>
<div ng-hide = "showServers">{{input.termServer.name}}</div>
<div ng-show="showServers">
<select ng-model="input.termServer" class="form-control"
ng-options="item.name for item in allServers"
ng-change="serverDirty = true">
</select>
</div>
</td>
<td>
<span ng-hide="showServers">
<i class="glyphicon glyphicon-question-sign clickable"
ng-click="testServer('Terminology')"
uib-popover="The terminology server holds ValueSets, and exposes terminology operations. Click to test."
popover-placement="left"
popover-trigger="'mouseenter'"></i>
<i ng-show="testing.testTerminology.ok" class="glyphicon glyphicon-ok pass"></i>
<i ng-show="testing.testTerminology.fail" class="glyphicon glyphicon-remove fail"></i>
</span>
</td>
</tr>
</table>
{{message}} {{elapsed}}
<div ng-show="showServers">
<button ng-show="serverDirty" class="btn btn-primary pull-right" ng-click="save()">Save</button>
<button class="btn btn-link pull-right" ng-click="setToDefault()">Set to default</button>
<em>Should all be the same FHIR version</em>
<br/> <br/>
</div>
<div>
<a href="#" ng-click="addServer()">Add Server</a>
<a href="#" class="pull-right" ng-click="allTheSame()"
ng-hide="showServers"
uib-popover="Set all the servers the same as the Data Server"
popover-placement="left"
popover-trigger="'mouseenter'">Set all the same as the Data Server</a>
</div>
</div>
</div>
<div class="myBox">
<h5>FHIR Links (open in new tab)</h5>
<div class="row">
<div class="col-md-6 col-sm-6">
<ul class="list-unstyled">
<li><a target="_blank" href="http://hl7.org/fhir/index.html">STU-3 (R3) Specification</a></li>
<li><a target="_blank" href="http://hl7.org/fhir/DSTU2/index.html">STU-2 Specification</a></li>
<li><a target="_blank" href="http://wiki.hl7.org/index.php?title=FHIR">FHIR wiki</a></li>
</ul>
</div>
<div class="col-md-6 col-sm-6">
<ul class="list-unstyled">
<li><a target="_blank" href="https://fhirblog.com/">Hay on FHIR</a></li>
<li><a target="_blank" href="https://chat.fhir.org/">FHIR Chat</a></li>
<li><a target="_blank" href="http://www.fhir.org/">FHIR.org</a></li>
<li><a target="_blank" href="http://fhirblog.com/clinicians-on-fhir-workshop/">Clinicians Workshop</a></li>
</ul>
</div>
</div>
</div>
<div class="myBox">
<h5>clinFHIR Videos (open in new tab)</h5>
<div class="row">
<div class="col-md-8 col-sm-8">
<ul class="list-unstyled">
<li><a target="_blank" href="https://vimeo.com/199927777">Scenario Builder</a></li>
<li><a target="_blank" href="https://vimeo.com/203252984">Adding structured data</a></li>
<li><a target="_blank" href="https://vimeo.com/203277373">Logical Modeller</a></li>
<li><a target="_blank" href="https://vimeo.com/200105501">Logical Modeller and Scenario Builder</a></li>
<li><a target="_blank" href="https://vimeo.com/203259751">RESTful query tool</a></li>
</ul>
</div>
</div>
<em>Note that some of these videos may describe earlier versions, so may not completely match the current functionality.</em>
</div>
<div class="myBox">
<h5>Other links</h5>
<div class="row">
<div class="col-md-8 col-sm-8">
<ul class="list-unstyled">
<li><a target="_blank" href="http://browser.ihtsdotools.org/">SNOMED browser</a></li>
<li><a target="_blank" href="http://ontoserver.csiro.au/shrimp/">SHRIMP (Terminology browser)</a></li>
</ul>
</div>
</div>
</div>
</div>
</div>
<div ng-show="displayMode == 'access'">
<div>
Last access from {{accessAudit.lastAccess.location['country_name']}} on
{{accessAudit.lastAccess.date | date:'yyyy-MM-dd HH:mm'}} ({{accessAudit.lastAccess.date | getAgeSeconds}} ago.)
</div>
<div class="row">
<div class="col-md-8 col-sm-8">
<div style="height: 200px; width: 100%">
<highchart id='hcAccessAudit' config="accessAudit.accessDays"></highchart>
</div>
</div>
<div class="col-md-4 col-sm-4">
<table class="table table-bordered">
<tr><th>Module</th><th>Count</th></tr>
<tr ng-repeat = "m in accessAudit.moduleList">
<td width="30%">{{m.name}}</td>
<td>{{m.cnt}}</td>
</tr>
</table>
<div style="height:400px; overflow-y: auto;" >
<table class="table table-bordered">
<tr><th>Country</th><th>Count</th></tr>
<tr ng-repeat="c in accessAudit.countryList">
<td width="30%">{{c.name}}</td>
<td>{{c.cnt}}</td>
</tr>
</table>
</div>
</div>
</div>
</div>
</div>
</body>
</html>