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include columns in tables for CBC, CV
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emlys committed Aug 20, 2021
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34 changes: 19 additions & 15 deletions source/coastal_blue_carbon.rst
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- :investspec:`coastal_blue_carbon.preprocessor landcover_snapshot_csv`

The path to rasters may be either absolute or relative to the location of the snapshots table itself.
Columns:

- :investspec:`coastal_blue_carbon.preprocessor landcover_snapshot_csv.columns.snapshot_year`
- :investspec:`coastal_blue_carbon.preprocessor landcover_snapshot_csv.columns.raster_path` The paths may be either absolute or relative to the location of the snapshots table itself.

- :investspec:`coastal_blue_carbon.preprocessor lulc_lookup_table_path`

Columns:

- :investspec:`coastal_blue_carbon.preprocessor lulc_lookup_table_path.columns.code`
- :investspec:`coastal_blue_carbon.preprocessor lulc_lookup_table_path.columns.lulc-class`
- :investspec:`coastal_blue_carbon.preprocessor lulc_lookup_table_path.columns.is_coastal_blue_carbon_habitat`


Outputs
^^^^^^^
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- :investspec:`coastal_blue_carbon.coastal_blue_carbon results_suffix`

- **Biophysical Table** (required): A table identifying landcover classes and
codes represented in the snapshot LULC rasters and relating these codes to
the initial quantities of carbon, rates of accumulation and magnitudes of
disturbance in each carbon pool. A template of this table is produced by
the preprocessor (described above), and is also included with the sample
data for the model.
- :investspec:`coastal_blue_carbon.coastal_blue_carbon biophysical_table_path` A template of this table is produced by
the preprocessor (described above), and is also included with the sample data for the model.

The columns required in this table are:
Columns:

- :investspec:`coastal_blue_carbon.coastal_blue_carbon biophysical_table_path.columns.code`
- :investspec:`coastal_blue_carbon.coastal_blue_carbon biophysical_table_path.columns.lulc-class`
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- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_transitions_table`
The Coastal Blue Carbon preprocessor exists to help create this table for you. You must edit the ``transitions_[suffix].csv`` preprocessor output as described in *Step 1 Preprocessing Outputs* before it can be used by the main model.

- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_snapshot_csv`
The raster with the earliest chronological year will be used as the baseline raster. If rasters provided in this table have different extents or resolutions, they will be resampled to the minimum resolution of the set of rasters, and clipped to the intersection of all of the bounding
boxes.
Columns:

- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_transitions_table.columns.lulc-class`
- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_transitions_table.columns.[LULC CODE]`

If you are only interested in the standing stock of carbon at a single year,
then only provide a single row in this table.
- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_snapshot_csv` The raster with the earliest chronological year will be used as the baseline raster. If rasters provided in this table have different extents or resolutions, they will be resampled to the minimum resolution of the set of rasters, and clipped to the intersection of all of the bounding boxes. If you are only interested in the standing stock of carbon at a single year, then only provide a single row in this table. All rasters provided in this table must be in a projected coordinate system with units in meters. ??

All rasters provided in this table must be in a projected coordinate system
with units in meters. ??
Columns:

- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_snapshot_csv.columns.snapshot_year`
- :investspec:`coastal_blue_carbon.coastal_blue_carbon landcover_snapshot_csv.columns.raster_path`
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