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Always start downloading input-2024-07-18.build7555.tgz when running the program #332

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fugunokaraage opened this issue Jan 27, 2025 · 0 comments

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@fugunokaraage
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Hi,

I already install PGAP at $HOME/.pgap where input-2024-07-18.build7555, test, and test_genomes-2024-07-18.build7555 directories exist.
Whenever I run pgap.py in other directory where input contig files are, downloading input-2024-07-18.build7555.tgz starts, that takes several hours.

When I put
$docker pull ncbi/pgap-utils:2024-07-18.build7555
all images seems to already exist.

How can I run PGAP smoothly without downloading the database?

Fugu

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