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ontology pull process logs errors for ontologies that are not supposed to be pulled #68

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alexskr opened this issue Mar 23, 2023 · 0 comments

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alexskr commented Mar 23, 2023

Ontology pull process logs error for ontologies that do not have pullLocation set. Those ontologies are not supposed to be pulled in the first place so this should not be considered an error.

E, [2023-03-22T18:27:58.346106 #11150] ERROR -- : Problem retrieving ZIP3 in OntologyPull:
ZIP3 has no pullLocation
/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:75:in `do_ontology_pull'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:36:in `block in do_remote_ontology_pull'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:33:in `each'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:33:in `do_remote_ontology_pull'
	/srv/ncbo/ncbo_cron/bin/ncbo_cron:291:in `block (3 levels) in <main>'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:65:in `block (3 levels) in scheduled_locking_job'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:51:in `fork'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:51:in `block (2 levels) in scheduled_locking_job'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/mlanett-redis-lock-0.2.7/lib/redis-lock.rb:43:in `lock'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/mlanett-redis-lock-0.2.7/lib/redis-lock.rb:234:in `lock'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:50:in `block in scheduled_locking_job'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/rufus-scheduler-2.0.24/lib/rufus/sc/jobs.rb:230:in `trigger_block'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/rufus-scheduler-2.0.24/lib/rufus/sc/jobs.rb:204:in `block in trigger'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/rufus-scheduler-2.0.24/lib/rufus/sc/scheduler.rb:430:in `block in trigger_job'
E, [2023-03-22T18:27:58.383609 #11150] ERROR -- : Problem retrieving ZIP5 in OntologyPull:
ZIP5 has no pullLocation
/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:75:in `do_ontology_pull'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:36:in `block in do_remote_ontology_pull'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:33:in `each'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/ontology_pull.rb:33:in `do_remote_ontology_pull'
	/srv/ncbo/ncbo_cron/bin/ncbo_cron:291:in `block (3 levels) in <main>'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:65:in `block (3 levels) in scheduled_locking_job'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:51:in `fork'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:51:in `block (2 levels) in scheduled_locking_job'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/mlanett-redis-lock-0.2.7/lib/redis-lock.rb:43:in `lock'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/mlanett-redis-lock-0.2.7/lib/redis-lock.rb:234:in `lock'
	/srv/ncbo/ncbo_cron/lib/ncbo_cron/scheduler.rb:50:in `block in scheduled_locking_job'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/rufus-scheduler-2.0.24/lib/rufus/sc/jobs.rb:230:in `trigger_block'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/rufus-scheduler-2.0.24/lib/rufus/sc/jobs.rb:204:in `block in trigger'
	/srv/ncbo/ncbo_cron/vendor/bundle/ruby/2.7.0/gems/rufus-scheduler-2.0.24/lib/rufus/sc/scheduler.rb:430:in `block in trigger_job'
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