Write your code to demultiplex the samples. Be sure to:
- Incorporate feedback from peer code reviews
- Utilize appropriate functions
- Sufficiently comment your code/use docstrings
- Use unit tests on functions/entire algorithm to ensure it works properly
- Create a useful report for the end user of your code
- Use argparse to "generalize" your code
- Follow the specifications laid out in Assignment the First for the code
- Unclear? Ask Leslie
Final work will be submitted on GitHub. Make sure your folder is well organized and final output is clearly labeled/summarized (a markdown file would be much appreciated!!). Use your code to demultiplex the samples and report:
- Percentage of reads from each sample
- Overall amount of index swapping
- Any figures/any other relevant data your code output