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Value error with 4d images #95

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yw7 opened this issue Dec 6, 2024 · 0 comments · May be fixed by #96
Open

Value error with 4d images #95

yw7 opened this issue Dec 6, 2024 · 0 comments · May be fixed by #96

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@yw7
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yw7 commented Dec 6, 2024

There is an error when resampling 4d images back to the original image.
To sove this we can check if the input image is 4d > take the first image from the last axis and resample the segmentation to that image.
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yw7 added a commit that referenced this issue Dec 6, 2024
@yw7
Fix value error with 4D images
79ac3ac 
Fixes #95

Add handling for 4D images in `transform_seg2image` function.

* Add a check for 4D images at the beginning of the `transform_seg2image` function.
* If the input image is 4D, take the first image from the last axis for resampling.
* Add a comment explaining the purpose of the check for 4D images.

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For more details, open the [Copilot Workspace session](https://copilot-workspace.githubnext.com/neuropoly/totalspineseg/issues/95?shareId=XXXX-XXXX-XXXX-XXXX).
@yw7 yw7 linked a pull request Dec 6, 2024 that will close this issue
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Fix value error with 4D images neuropoly/totalspineseg
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@yw7