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error on ensembl_fasta_download #57

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skr3178 opened this issue Nov 6, 2022 · 1 comment
Open

error on ensembl_fasta_download #57

skr3178 opened this issue Nov 6, 2022 · 1 comment
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@skr3178
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skr3178 commented Nov 6, 2022

Error executing process > 'ensembl_fasta_download'

Caused by:
Process ensembl_fasta_download terminated with an error exit status (137)

Tried with higher RAM -128 GB
Command executed:

pypgatk_cli.py ensembl-downloader
--config_file ensembl_downloader_config.yaml
--ensembl_name homo_sapiens
-sv -sc

Command exit status:
137

@skr3178 skr3178 added the bug Something isn't working label Nov 6, 2022
@ginnyintifa
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I have the same error
with this command:

nextflow run nf-core/pgdb -profile docker --ensembl_name homo_sapiens --decoy

on mac OS

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