From cffe50452812762af5c98cbecd7ec88cf2fc48f4 Mon Sep 17 00:00:00 2001 From: Robert Allaway Date: Thu, 26 Oct 2023 13:55:44 -0500 Subject: [PATCH] update biobank valid values --- nf_research_tools.rdb.model.csv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nf_research_tools.rdb.model.csv b/nf_research_tools.rdb.model.csv index 83edb8ee..f1bcb9b9 100644 --- a/nf_research_tools.rdb.model.csv +++ b/nf_research_tools.rdb.model.csv @@ -57,10 +57,10 @@ biobankId,A unique identifier for the biobank.,,,TRUE,,biobankDetails,,, biobankURL,A URL for the biobank landing page.,,,TRUE,,biobankDetails,,, specimenType,The types of specimens that are banked.,"human tissue, xenograft tumors, cell lines",,TRUE,,biobankDetails,,,list like specimenTissueType,The types of tissues that are banked.,"blood, tumor, cerebrospinal fluid, nerve, skin, bone, brain",,TRUE,,biobankDetails,,,list like -tumorType,"The types of tumors that are banked, if applicable.","cutaneous neurofibroma, plexiform neurofibroma, schwannoma, meningioma, malignant peripheral nerve sheath tumor, low grade glioma, high grade glioma, pheochromocytoma, optic nerve glioma, atypical neurofibroma, neurofibroma NOS, diffuse infiltrating neurofibroma, brain NOS",,TRUE,,biobankDetails,,,list like +tumorType,"The types of tumors that are banked, if applicable.","cutaneous neurofibroma, plexiform neurofibroma, atypical neurofibroma, schwannoma, meningioma, malignant peripheral nerve sheath tumor, low grade glioma, high grade glioma, pheochromocytoma, optic nerve glioma, atypical neurofibroma, neurofibroma NOS, diffuse infiltrating neurofibroma, brain NOS, other",,TRUE,,biobankDetails,,,list like diseaseType,"The diseases of the banked specimens, if applicable.","Neurofibromatosis type 1, Neurofibromatosis type 2, Schwannomatosis",,TRUE,,biobankDetails,,,list like specimenPreparationMethod,The preservation methods used by the biobank.,"Fresh collected, Flash frozen, FFPE, Cryopreserved, OCT, RNA later, Formalin-fixed, Ethanol",,TRUE,,biobankDetails,,,list like -specimenFormat,How the specimens have been processed in preparation for distribution.,"whole tumor, slide, whole cell lysate, DNA, RNA",,TRUE,,biobankDetails,,,list like +specimenFormat,How the specimens have been processed in preparation for distribution.,"whole tumor, slide, cells, whole cell lysate, DNA, RNA",,TRUE,,biobankDetails,,,list like observation,"A remark, statement, or comment based on the resource.",,"Component, observationId, resourceId, publicationId, observationSubmitterName, synapseId, observationText, observationType, observationPhase, observationTime, observationTimeUnits, reliabilityRating, easeOfUseRating, observationLink",FALSE,,observation,"observationId, resourceId, publicationId, observationSubmitterName, synapseId, observationText, observationType, observationPhase, observationTime, observationTimeUnits, reliabilityRating, easeOfUseRating, observationLink","resource, investigator, publication", observationId,A unique identifier for the observation.,,,TRUE,,observation,,, observationSubmitterName,The name of the person submitting the observation. ,,,TRUE,,observation,,,