From d7f12c4e0b05d4fada22b1e73b211dac3ec87c7a Mon Sep 17 00:00:00 2001
From: Niema Moshiri <niemamoshiri@gmail.com>
Date: Fri, 15 Mar 2024 14:45:26 -0700
Subject: [PATCH] Update README.md

---
 README.md | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/README.md b/README.md
index ac2a448..d38b490 100644
--- a/README.md
+++ b/README.md
@@ -18,6 +18,12 @@ make
 sudo make install
 ```
 
+In order to compile and run ViralConsensus, htslib needs to be installed in your environment's library path. If you followed the instructions above (so htslib was installed in `/usr/local`), you may need to add the following to your `.bashrc` file:
+
+```bash
+export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:/usr/local/lib"
+```
+
 Then, you can simply download the latest release tarball (or clone this repo) and compile with `make`:
 
 ```bash