All notable changes to this project will be documented in this file.
The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.
- Update mrdetect module to version 2.0.0
- Split detectSNVs task into three components
- Resource specific files now exposed in map and required inputs reference and instrument model determine resources to be used
- Get HBC BAM list path from environment module
pwgs-hbc
instead of hard-coded value
- Update HBC BAM files to version 2.0
- Fixed output file name issues. GRD-809
- Add vidarr labels to outputs (changes to medata only) GRD-797
- Added SNP.count and VAF files
- Moved mrdetect algorithm scripts to bitbucket
- Separated filterVCF function from detectSNVs
- Changed filterAndDetect command to match code updates (v1.1.1)
- Workflow finalized for production
- A brand-new workflow.