diff --git a/changes/fix_inputdef_for_cardea_detailed_cases.md b/changes/fix_inputdef_for_cardea_detailed_cases.md new file mode 100644 index 000000000..fdbf2e255 --- /dev/null +++ b/changes/fix_inputdef_for_cardea_detailed_cases.md @@ -0,0 +1 @@ +Sequencing definition should contain the qcFailed field \ No newline at end of file diff --git a/plugin-cardea/src/main/java/ca/on/oicr/gsi/shesmu/cardea/CaseSummaryDetailedValue.java b/plugin-cardea/src/main/java/ca/on/oicr/gsi/shesmu/cardea/CaseSummaryDetailedValue.java index 9d0e4b0df..1bbfe37c5 100644 --- a/plugin-cardea/src/main/java/ca/on/oicr/gsi/shesmu/cardea/CaseSummaryDetailedValue.java +++ b/plugin-cardea/src/main/java/ca/on/oicr/gsi/shesmu/cardea/CaseSummaryDetailedValue.java @@ -78,7 +78,7 @@ public Optional completedDate() { return completedDate; } - @ShesmuVariable(type = "ao4test$stype$scomplete$blimsIds$ao2id$ssupplemental$b") + @ShesmuVariable(type = "ao4test$stype$scomplete$blimsIds$ao3id$sqcFailed$bsupplemental$b") public Set sequencing() { return sequencing; }