NAMESPACE

# Generated by roxygen2: do not edit by hand

export(available_datasets)
export(cell_type_map)
export(cell_type_tree)
export(convert_human_mouse_genes)
export(custom_deconvolution_methods)
export(deconvolute)
export(deconvolute_abis)
export(deconvolute_base_algorithm)
export(deconvolute_base_custom)
export(deconvolute_cibersort)
export(deconvolute_cibersort_custom)
export(deconvolute_consensus_tme)
export(deconvolute_consensus_tme_custom)
export(deconvolute_dcq)
export(deconvolute_epic)
export(deconvolute_epic_custom)
export(deconvolute_estimate)
export(deconvolute_mcp_counter)
export(deconvolute_mmcp_counter)
export(deconvolute_mouse)
export(deconvolute_quantiseq)
export(deconvolute_seqimmucc)
export(deconvolute_timer)
export(deconvolute_xcell)
export(deconvolution_methods)
export(deconvolution_methods_mouse)
export(eset_to_matrix)
export(get_all_children)
export(get_dcq_cell_types_list)
export(make_bulk_eset)
export(make_random_bulk)
export(map_cell_types)
export(map_result_to_celltypes)
export(reduce_mouse_cell_types)
export(scale_to_million)
export(set_cibersort_binary)
export(set_cibersort_mat)
export(timer_available_cancers)
export(xCell.data)
import(ComICS)
import(dplyr)
import(mMCPcounter)
import(magrittr)
import(methods)
import(readr)
import(stringr)
import(sva)
importFrom(Biobase,ExpressionSet)
importFrom(Biobase,exprs)
importFrom(Biobase,fData)
importFrom(Biobase,pData)
importFrom(BiocParallel,bpparam)
importFrom(EPIC,EPIC)
importFrom(MASS,rlm)
importFrom(biomaRt,getLDS)
importFrom(biomaRt,useEnsembl)
importFrom(dplyr,select)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,abline)
importFrom(graphics,barplot)
importFrom(graphics,box)
importFrom(graphics,mtext)
importFrom(matrixStats,rowMedians)
importFrom(matrixStats,rowSds)
importFrom(preprocessCore,normalize.quantiles)
importFrom(purrr,map_dfr)
importFrom(rlang,dots_list)
importFrom(stats,aggregate)
importFrom(stats,lm)
importFrom(stats,lsfit)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,qqplot)
importFrom(testit,assert)
importFrom(tibble,as_tibble)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rowid_to_column)
importFrom(utils,assignInMyNamespace)
importFrom(utils,capture.output)
importFrom(utils,read.csv)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)