From 3e3ccd1b53e5cff04be3069e62c03f8377ece738 Mon Sep 17 00:00:00 2001 From: Adam H Sparks Date: Mon, 25 Jun 2018 16:53:16 +1000 Subject: [PATCH] Clean up vignette - Don't print messages when loading library - Set theme outside of loading libraries - Remove `scale_colour_few()`, only need `scale_fill_few()` - Reformat code - Update logo in website --- DESCRIPTION | 2 +- codemeta.json | 16 +- docs/CONDUCT.html | 2 +- docs/CONTRIBUTING.html | 7 +- docs/LICENSE-text.html | 2 +- docs/LICENSE.html | 2 +- docs/articles/IEW12_slides.html | 222 +++++++++--------- .../figure-html/unnamed-chunk-1-1.png | Bin 0 -> 126999 bytes .../figure-html/unnamed-chunk-2-1.png | Bin 0 -> 51166 bytes .../figure-html/unnamed-chunk-3-1.png | Bin 126873 -> 55873 bytes .../figure-html/unnamed-chunk-4-1.png | Bin 51298 -> 54300 bytes .../figure-html/unnamed-chunk-5-1.png | Bin 55484 -> 50468 bytes .../figure-html/unnamed-chunk-6-1.png | Bin 54179 -> 51595 bytes .../figure-html/unnamed-chunk-8-1.png | Bin 51347 -> 88995 bytes docs/articles/index.html | 2 +- docs/authors.html | 2 +- docs/favicon.ico | Bin 2507 -> 2593 bytes docs/index.html | 32 +-- docs/logo.png | Bin 92578 -> 33061 bytes docs/pkgdown.yml | 2 +- docs/reference/OPP.at.IEW2018.html | 2 +- docs/reference/figures/logo.png | Bin 92578 -> 33061 bytes docs/reference/index.html | 2 +- vignettes/IEW12_slides.Rmd | 128 +++++----- 24 files changed, 218 insertions(+), 205 deletions(-) create mode 100644 docs/articles/IEW12_slides_files/figure-html/unnamed-chunk-1-1.png create mode 100644 docs/articles/IEW12_slides_files/figure-html/unnamed-chunk-2-1.png diff --git a/DESCRIPTION b/DESCRIPTION index eb33c71..c19f839 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,5 +1,5 @@ Package: OPP.at.IEW12 -Version: 0.0.7 +Version: 0.0.8 Title: Open Ideas, Data and Code Sharing: Epidemiologists Should Be in Front! Description: Supplementary material for talk at IEW12 delivered by Emerson M Del Ponte. diff --git a/codemeta.json b/codemeta.json index 05e7fcc..531ac87 100644 --- a/codemeta.json +++ b/codemeta.json @@ -10,7 +10,7 @@ "codeRepository": "https://github.com/adamhsparks/OPP.at.IEW12", "issueTracker": "https://github.com/adamhsparks/OPP.at.IEW12/issues", "license": "https://spdx.org/licenses/MIT", - "version": "0.0.7", + "version": "0.0.8", "programmingLanguage": { "@type": "ComputerLanguage", "name": "R", @@ -81,6 +81,18 @@ }, "sameAs": "https://CRAN.R-project.org/package=ggplot2" }, + { + "@type": "SoftwareApplication", + "identifier": "ggthemes", + "name": "ggthemes", + "provider": { + "@id": "https://cran.r-project.org", + "@type": "Organization", + "name": "Comprehensive R Archive Network (CRAN)", + "url": "https://cran.r-project.org" + }, + "sameAs": "https://CRAN.R-project.org/package=ggthemes" + }, { "@type": "SoftwareApplication", "identifier": "gsheet", @@ -155,7 +167,7 @@ } ], "readme": "https://github.com/openplantpathology/OPP.at.IEW12/blob/master/README.md", - "fileSize": "33.127KB", + "fileSize": "38.093KB", "contIntegration": [ "https://travis-ci.org/openplantpathology/OPP.at.IEW12", "https://ci.appveyor.com/project/adamhsparks/opp-at-iew12/branch/master" diff --git a/docs/CONDUCT.html b/docs/CONDUCT.html index e7482bf..362f35b 100644 --- a/docs/CONDUCT.html +++ b/docs/CONDUCT.html @@ -61,7 +61,7 @@ Open ideas, data and code sharing: epidemiologists should be in front! - 0.0.7 + 0.0.8 diff --git a/docs/CONTRIBUTING.html b/docs/CONTRIBUTING.html index 2f2dcc6..d87c3b7 100644 --- a/docs/CONTRIBUTING.html +++ b/docs/CONTRIBUTING.html @@ -61,7 +61,7 @@ Open ideas, data and code sharing: epidemiologists should be in front! - 0.0.7 + 0.0.8 @@ -121,8 +121,11 @@