_site.yml

name: 'McRoberts_and_Esker'
output_dir: docs
output:
  html_document:
    css: style.css
    theme: cosmo
    df_print: paged
    lib_dir: site_libs
    self_contained: no
    highlight: textmate
    include:
      after_body: footer.md
    toc: true
    toc_float:
     collapsed: false
     smooth_scroll: false
bibliography: crossref.bib
csl: chicago-author-date.csl
navbar:
  title: Multivariate Analysis in R
  left:
  - text: Introduction
    href: index.html
  - text: Topics
    menu:
    - text: Principal Components Analysis
      href: 1-MV_PCA.html
    - text: Principal Coordinates Analysis
      href: 2-MV_PCO.html
    - text: Cluster analysis
      href: 3-Cluster.html
    - text: Linking ordination and clustering 
      href: 4-PCA_PCO_cluster.html
    - text: Discriminant Analysis and Manova
      href: 5-DA_Manova.html
  - text: Bonus material
    menu: 
    - text: Introduction to R
      href: Intro_R.html

  right:
  - text: source
    icon: fa-github-square
    href: https://github.com/openplantpathology/OPP_workshop_Multivariate