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Consider performance of event count calculation #164

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LFISHER7 opened this issue May 24, 2023 · 0 comments
Open

Consider performance of event count calculation #164

LFISHER7 opened this issue May 24, 2023 · 0 comments

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@LFISHER7
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Calculating the event count currently requires loading all of the individual input files as we need to identify the number of unique patients. This takes up a significant portion of the analysis runtime (see logs here). We should consider any alternatives.

Prompted by #163 (review)
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@LFISHER7